Variant report

Variant	nsv608058
Chromosome Location	chr7:102466741-102571713
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1532)
CpG islands
(count:855)
Chromatin interactive
region (count:61)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1532 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:102478846-102479241	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:102500720-102501319	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:102509524-102509951	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:102514028-102514887	HepG2	liver:	n/a	n/a
5	ARID3A	chr7:102516155-102516615	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:102566747-102567026	K562	blood:	n/a	n/a
7	ATF1	chr7:102516353-102516642	K562	blood:	n/a	n/a
8	ATF1	chr7:102531030-102531406	K562	blood:	n/a	n/a
9	ATF1	chr7:102533184-102533443	K562	blood:	n/a	n/a
10	ATF2	chr7:102481620-102482163	GM12878	blood:	n/a	n/a
11	ATF2	chr7:102484200-102484713	GM12878	blood:	n/a	n/a
12	ATF2	chr7:102475399-102475848	GM12878	blood:	n/a	n/a
13	ATF2	chr7:102475368-102475893	GM12878	blood:	n/a	n/a
14	ATF2	chr7:102484177-102484790	GM12878	blood:	n/a	n/a
15	ATF3	chr7:102516248-102516624	K562	blood:	n/a	n/a
16	ATF3	chr7:102515979-102516734	HCT-116	colon:	n/a	n/a
17	ATF3	chr7:102516058-102516843	HCT-116	colon:	n/a	n/a
18	ATF3	chr7:102516084-102516739	A549	lung:	n/a	n/a
19	ATF3	chr7:102515996-102516786	A549	lung:	n/a	n/a
20	BATF	chr7:102481751-102482055	GM12878	blood:	n/a	n/a
21	BATF	chr7:102514586-102514859	GM12878	blood:	n/a	n/a
22	BATF	chr7:102484252-102484610	GM12878	blood:	n/a	n/a
23	BATF	chr7:102514509-102514873	GM12878	blood:	n/a	n/a
24	BATF	chr7:102484259-102484624	GM12878	blood:	n/a	n/a
25	BATF	chr7:102475444-102475777	GM12878	blood:	n/a	chr7:102475647-102475658 chr7:102475648-102475658
26	BATF	chr7:102481731-102482084	GM12878	blood:	n/a	n/a
27	BATF	chr7:102475426-102475852	GM12878	blood:	n/a	chr7:102475647-102475658 chr7:102475648-102475658
28	BCL11A	chr7:102475497-102475744	GM12878	blood:	n/a	n/a
29	BCL11A	chr7:102514598-102514832	GM12878	blood:	n/a	chr7:102514741-102514750
30	BCL11A	chr7:102484258-102484654	GM12878	blood:	n/a	n/a
31	BCL11A	chr7:102484332-102484641	GM12878	blood:	n/a	n/a
32	BCL11A	chr7:102481679-102482030	GM12878	blood:	n/a	n/a
33	BCL11A	chr7:102475417-102475810	GM12878	blood:	n/a	n/a
34	BCL3	chr7:102515891-102516752	A549	lung:	n/a	chr7:102515915-102515924
35	BCL3	chr7:102515964-102516936	A549	lung:	n/a	n/a
36	BCL3	chr7:102484358-102484686	GM12878	blood:	n/a	n/a
37	BCLAF1	chr7:102481611-102482122	GM12878	blood:	n/a	n/a
38	BCLAF1	chr7:102484307-102484685	GM12878	blood:	n/a	n/a
39	BCLAF1	chr7:102475385-102475792	GM12878	blood:	n/a	n/a
40	BHLHE40	chr7:102475416-102475745	GM12878	blood:	n/a	n/a
41	BHLHE40	chr7:102516444-102516605	K562	blood:	n/a	n/a
42	BHLHE40	chr7:102484310-102484623	GM12878	blood:	n/a	n/a
43	BRCA1	chr7:102516256-102516827	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr7:102531852-102531897	GM12878	blood:	n/a	n/a
45	CBX3	chr7:102475384-102475952	HCT-116	colon:	n/a	n/a
46	CBX3	chr7:102544042-102544367	K562	blood:	n/a	n/a
47	CBX3	chr7:102548441-102548837	K562	blood:	n/a	n/a
48	CBX3	chr7:102514409-102515051	HCT-116	colon:	n/a	n/a
49	CBX3	chr7:102514418-102515075	HCT-116	colon:	n/a	n/a
50	CBX3	chr7:102516123-102516857	HCT-116	colon:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:102566723-102566773	SK-N-SH	brain:	n/a
2	chr7:102566723-102566773	SK-N-SH	brain:	n/a
3	chr7:102553437-102553487	AG10803	skin:	n/a
4	chr7:102500111-102500161	NB4	blood:	n/a
5	chr7:102553293-102553343	GM12878	blood:	n/a
6	chr7:102506387-102506437	PFSK-1	brain:	n/a
7	chr7:102558323-102558373	HAEpiC	amniotic membrane:	n/a
8	chr7:102553369-102553419	HPAEpiC	pulmonary alveolar:	n/a
9	chr7:102477205-102477255	GM12891	blood:	n/a
10	chr7:102566723-102566773	Jurkat	blood:	n/a
11	chr7:102553045-102553095	AG09309	skin:	n/a
12	chr7:102553437-102553487	AoSMC	blood vessel:	n/a
13	chr7:102553457-102553507	GM12878	blood:	n/a
14	chr7:102470281-102470331	HRPEpiC	eye:	n/a
15	chr7:102553369-102553419	PANC-1	pancreas:	n/a
16	chr7:102500111-102500161	HIPEpiC	eye:	n/a
17	chr7:102558323-102558373	Caco-2	colon:	n/a
18	chr7:102470281-102470331	GM12878	blood:	n/a
19	chr7:102506387-102506437	AG09319	gingival:	n/a
20	chr7:102477205-102477255	CMK	blood:	n/a
21	chr7:102470281-102470331	NH-A	brain:	n/a
22	chr7:102553437-102553487	HCM	heart:	n/a
23	chr7:102558323-102558373	HIPEpiC	eye:	n/a
24	chr7:102566723-102566773	AG10803	skin:	n/a
25	chr7:102553369-102553419	ovcar-3	ovarian:	n/a
26	chr7:102470281-102470331	LNCaP	prostate:	n/a
27	chr7:102477205-102477255	IMR90	lung:	fetal
28	chr7:102553293-102553343	HCT-116	colon:	n/a
29	chr7:102470281-102470331	ECC-1	luminal epithelium:	n/a
30	chr7:102552239-102552289	ProgFib	skin:	n/a
31	chr7:102477205-102477255	Caco-2	colon:	n/a
32	chr7:102477205-102477255	ovcar-3	ovarian:	n/a
33	chr7:102552239-102552289	HRCEpiC	kidney:	n/a
34	chr7:102553369-102553419	GM12891	blood:	n/a
35	chr7:102553437-102553487	K562	blood:	n/a
36	chr7:102553457-102553507	MCF10A-Er-Src	breast:	n/a
37	chr7:102558323-102558373	SKMC	muscle:	n/a
38	chr7:102553437-102553487	T-47D	breast:	n/a
39	chr7:102553369-102553419	LNCaP	prostate:	n/a
40	chr7:102553437-102553487	SKMC	muscle:	n/a
41	chr7:102470281-102470331	A549	lung:	n/a
42	chr7:102553369-102553419	GM06990	blood:	n/a
43	chr7:102553369-102553419	T-47D	breast:	n/a
44	chr7:102477205-102477255	AG09319	gingival:	n/a
45	chr7:102553045-102553095	MCF10A-Er-Src	breast:	n/a
46	chr7:102553369-102553419	HCF	heart:	n/a
47	chr7:102553045-102553095	A549	lung:	n/a
48	chr7:102506387-102506437	Jurkat	blood:	n/a
49	chr7:102553369-102553419	K562	blood:	n/a
50	chr7:102470281-102470331	HEK293	kidney:	embryo

(count:61 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:102556611..102558865-chr7:102559053..102561670,2	K562	blood:
2	chr7:102526206..102528003-chr7:102535680..102538379,2	MCF-7	breast:
3	chr7:102516404..102517929-chr7:102714703..102716697,2	MCF-7	breast:
4	chr7:102526206..102528003-chr7:102535680..102538379,2	MCF-7	breast:
5	chr7:102474929..102477472-chr7:102495351..102498066,2	K562	blood:
6	chr7:102568377..102571452-chr7:102572931..102576116,3	K562	blood:
7	chr7:102556325..102558865-chr7:102559053..102562636,3	K562	blood:
8	chr7:102459925..102462268-chr7:102466191..102467871,2	K562	blood:
9	chr7:102483542..102485503-chr7:102492215..102494195,2	K562	blood:
10	chr7:102473443..102475589-chr7:102480022..102482918,2	K562	blood:
11	chr7:102558852..102560445-chr7:102565710..102568123,2	K562	blood:
12	chr7:102552431..102554156-chr7:102558067..102560238,3	K562	blood:
13	chr7:102517307..102518855-chr7:102521320..102524235,2	MCF-7	breast:
14	chr7:102499316..102501151-chr7:102502125..102504544,2	K562	blood:
15	chr7:102556611..102558865-chr7:102559053..102561670,2	K562	blood:
16	chr7:102522158..102525265-chr7:102531503..102535074,3	K562	blood:
17	chr7:102513883..102516664-chr7:102520756..102522395,2	K562	blood:
18	chr7:102501610..102503166-chr7:102508637..102510523,2	K562	blood:
19	chr7:102459530..102461153-chr7:102484743..102487140,2	K562	blood:
20	chr7:102513883..102516664-chr7:102520756..102522395,2	K562	blood:
21	chr7:102517307..102518855-chr7:102521320..102524235,2	MCF-7	breast:
22	chr7:102489859..102491552-chr7:102503328..102506075,2	MCF-7	breast:
23	chr7:102510827..102513027-chr7:102515036..102518141,3	K562	blood:
24	chr7:102527046..102528879-chr7:102528977..102531238,2	MCF-7	breast:
25	chr7:102517778..102519381-chr7:102714945..102717591,2	MCF-7	breast:
26	chr7:102501610..102503166-chr7:102508637..102510523,2	K562	blood:
27	chr7:102522158..102525265-chr7:102531503..102535074,3	K562	blood:
28	chr7:102527046..102528879-chr7:102528977..102531238,2	MCF-7	breast:
29	chr7:102490998..102493774-chr7:102495300..102496979,2	K562	blood:
30	chr7:102473090..102475084-chr7:102477070..102479073,2	K562	blood:
31	chr7:102562952..102565366-chr7:102565830..102568184,3	MCF-7	breast:
32	chr7:102503409..102506375-chr7:102514987..102518844,3	K562	blood:
33	chr7:102489665..102492498-chr7:102495300..102497224,2	K562	blood:
34	chr7:102510827..102513027-chr7:102515036..102518141,3	K562	blood:
35	chr7:102489665..102492498-chr7:102495300..102497224,2	K562	blood:
36	chr7:102558852..102560445-chr7:102565710..102568123,2	K562	blood:
37	chr7:102504642..102507106-chr7:102507263..102511653,3	K562	blood:
38	chr7:102529179..102531129-chr7:102713390..102716151,2	MCF-7	breast:
39	chr7:102504642..102507106-chr7:102507263..102511653,3	K562	blood:
40	chr7:102471265..102473661-chr7:102474795..102476825,2	K562	blood:
41	chr7:102497060..102498758-chr7:102613043..102615053,2	K562	blood:
42	chr7:102483542..102485503-chr7:102492215..102494195,2	K562	blood:
43	chr7:102501221..102503373-chr7:102515985..102518701,2	MCF-7	breast:
44	chr7:102499316..102501151-chr7:102502125..102504544,2	K562	blood:
45	chr7:102562952..102565366-chr7:102565830..102568184,3	MCF-7	breast:
46	chr7:102535894..102537505-chr7:102552390..102554520,2	MCF-7	breast:
47	chr2:22132336..22133254-chr7:102557291..102557936,2	MCF-7	breast:
48	chr7:102513072..102513724-chr9:129702545..129703389,2	MCF-7	breast:
49	chr7:102503409..102506375-chr7:102514987..102518844,3	K562	blood:
50	chr20:52596990..52599653-chr7:102503790..102506770,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM185A-1	chr7:102497897-102498202	NONHSAT122525
2	lnc-FAM185A-2	chr7:102553447-102553592	NONHSAT122526

No data

Variant related genes	Relation type
RNU6-1136P	TF binding region
RN7SKP198	TF binding region
LRRC17	TF binding region
RNU6-1136P	CpG island
RN7SKP198	CpG island
LRRC17	CpG island
ENSG00000161040	chromatin interactions
ENSG00000170632	chromatin interactions
ENSG00000230257	chromatin interactions
ENSG00000252643	chromatin interactions
ENSG00000128606	chromatin interactions
ENSG00000238324	chromatin interactions

Extended variants
information (count: 3565 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:3565 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1541519	chr7:102466741-102466742	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs182142736	chr7:102466765-102466766	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs73192009	chr7:102466776-102466777	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs548590835	chr7:102466802-102466803	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs190051809	chr7:102466803-102466804	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs71570400	chr7:102466824-102466825	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs531273081	chr7:102466825-102466826	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs182204905	chr7:102466902-102466903	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs58919995	chr7:102466977-102466978	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs368290337	chr7:102467153-102467154	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs199892377	chr7:102467167-102467168	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs375905655	chr7:102467172-102467173	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs111697169	chr7:102467173-102467174	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs10251685	chr7:102467190-102467191	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs202050649	chr7:102467202-102467203	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs57530371	chr7:102467204-102467205	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs200213777	chr7:102467206-102467207	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs58307950	chr7:102467208-102467209	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs6465874	chr7:102467216-102467217	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs66929843	chr7:102467219-102467220	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs189840826	chr7:102467298-102467299	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs552667465	chr7:102467310-102467311	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs567790929	chr7:102467321-102467322	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs150074527	chr7:102467361-102467362	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs550194499	chr7:102467370-102467371	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs568776392	chr7:102467478-102467479	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs535159565	chr7:102467516-102467517	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs372270933	chr7:102467587-102467588	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs556952491	chr7:102467592-102467593	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs575121905	chr7:102467618-102467619	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs536176147	chr7:102467642-102467643	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs182118658	chr7:102467647-102467648	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs74706209	chr7:102467656-102467657	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs73406250	chr7:102467671-102467672	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs185645690	chr7:102467719-102467720	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs561843474	chr7:102467745-102467746	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs575020153	chr7:102467772-102467773	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs541946501	chr7:102467775-102467776	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs34963052	chr7:102467798-102467799	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs371296409	chr7:102467843-102467844	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs376785191	chr7:102467895-102467896	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs566554593	chr7:102467913-102467914	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs563745076	chr7:102467936-102467937	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs530763840	chr7:102467990-102467991	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs552841381	chr7:102467991-102467992	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs564406700	chr7:102468039-102468040	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs117885974	chr7:102468111-102468112	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs191232779	chr7:102468197-102468198	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs12113233	chr7:102468199-102468200	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs148791976	chr7:102468217-102468218	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Malignant melanoma	17260012	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	16608533	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Liver carcinoma	19366792	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Adenocarcinoma	19607727	CNVD
Multiple myeloma	16461302	CNVD
Breast cancer	21858162	CNVD
Emphysema	19352772	CNVD
Effusion lymphoma	18079361	CNVD
Medulloblastoma	17653508	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Autism	19401682	CNVD
Neuroticism	17667963	CNVD
Prostate cancer	18632612	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Cancer	19907438	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Bipolar disorder	19114987	CNVD
abnormal development	18461090	CNVD
Non-syndromic sensorineural hearing loss	19212409	CNVD
Ovarian cancer	21781307	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1642 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102416400-102467600	Weak transcription	Brain Anterior Caudate	brain
2	chr7:102421600-102475600	Weak transcription	Fetal Thymus	thymus
3	chr7:102422000-102474800	Weak transcription	Duodenum Mucosa	Duodenum
4	chr7:102422000-102476000	Weak transcription	Fetal Muscle Trunk	muscle
5	chr7:102439600-102467400	Weak transcription	Thymus	Thymus
6	chr7:102445600-102467600	Weak transcription	Stomach Smooth Muscle	stomach
7	chr7:102445600-102469200	Weak transcription	Fetal Brain Male	brain
8	chr7:102445800-102467400	Weak transcription	Lung	lung
9	chr7:102446200-102467400	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr7:102447000-102469400	Weak transcription	Brain Angular Gyrus	brain
11	chr7:102447200-102467400	Weak transcription	Primary B cells from cord blood	blood
12	chr7:102447200-102469400	Weak transcription	Fetal Brain Female	brain
13	chr7:102447400-102477200	Weak transcription	Psoas Muscle	Psoas
14	chr7:102447800-102467400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr7:102447800-102473000	Weak transcription	Placenta	Placenta
16	chr7:102448000-102469200	Weak transcription	Right Ventricle	heart
17	chr7:102448000-102479000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr7:102448200-102470800	Weak transcription	Small Intestine	intestine
19	chr7:102448400-102471800	Weak transcription	Primary B cells from peripheral blood	blood
20	chr7:102449400-102467400	Weak transcription	Left Ventricle	heart
21	chr7:102449400-102467600	Weak transcription	Fetal Muscle Leg	muscle
22	chr7:102449600-102467400	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr7:102449600-102469400	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr7:102450000-102475000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr7:102450200-102475600	Weak transcription	Esophagus	oesophagus
26	chr7:102452000-102480000	Weak transcription	Colon Smooth Muscle	Colon
27	chr7:102452200-102467400	Weak transcription	Brain Cingulate Gyrus	brain
28	chr7:102452200-102472800	Weak transcription	HSMMtube	muscle
29	chr7:102452400-102469400	Weak transcription	Adipose Nuclei	Adipose
30	chr7:102454000-102467800	Weak transcription	Fetal Kidney	kidney
31	chr7:102454200-102469400	Weak transcription	HepG2	liver
32	chr7:102454200-102484600	Weak transcription	Primary hematopoietic stem cells	blood
33	chr7:102454400-102469600	Weak transcription	Aorta	Aorta
34	chr7:102454400-102475000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr7:102454600-102475000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr7:102454600-102475600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr7:102454800-102467400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
38	chr7:102454800-102467600	Weak transcription	Fetal Stomach	stomach
39	chr7:102454800-102473200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr7:102455000-102467600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr7:102455000-102467800	Weak transcription	HMEC	breast
42	chr7:102455000-102469600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr7:102455000-102475000	Weak transcription	NHLF	lung
44	chr7:102455000-102475000	Weak transcription	Osteobl	bone
45	chr7:102455200-102467400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr7:102455200-102469400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr7:102455200-102472800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr7:102455600-102469200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr7:102455600-102473200	Weak transcription	HSMM	muscle
50	chr7:102456000-102469200	Weak transcription	Pancreas	Pancrea

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links