Variant report

Variant	nsv609723
Chromosome Location	chr8:3134476-3143310
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:3141618-3141628	K562	blood:	n/a	n/a
2	BHLHE40	chr8:3142129-3142341	GM12878	blood:	n/a	n/a
3	BRCA1	chr8:3142211-3142538	Hela-S3	cervix:	n/a	chr8:3142419-3142426
4	CHD2	chr8:3142082-3142314	GM12878	blood:	n/a	n/a
5	CTCF	chr8:3142220-3142370	HBMEC	blood vessel:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
6	CTCF	chr8:3141494-3142489	K562	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
7	CTCF	chr8:3142140-3142141	GM10248	blood:	n/a	n/a
8	CTCF	chr8:3142200-3142350	NB4	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
9	CTCF	chr8:3142220-3142370	GM12865	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
10	CTCF	chr8:3142240-3142390	GM12872	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
11	CTCF	chr8:3142161-3142407	GM12892	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
12	CTCF	chr8:3141606-3142004	A549	lung:	n/a	n/a
13	CTCF	chr8:3142200-3142350	AoAF	blood vessel:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
14	CTCF	chr8:3141600-3141750	HL-60	blood:	n/a	n/a
15	CTCF	chr8:3141600-3141750	GM12873	blood:	n/a	n/a
16	CTCF	chr8:3142220-3142370	Hela-S3	cervix:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
17	CTCF	chr8:3142200-3142350	BJ	skin:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
18	CTCF	chr8:3142200-3142350	K562	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
19	CTCF	chr8:3141975-3142420	K562	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
20	CTCF	chr8:3141603-3141743	GM10266	blood:	n/a	n/a
21	CTCF	chr8:3141580-3141730	HEEpiC	esophagus:	n/a	n/a
22	CTCF	chr8:3142180-3142330	GM06990	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
23	CTCF	chr8:3142200-3142350	AG04449	skin:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
24	CTCF	chr8:3141760-3141910	HPAF	blood vessel:	n/a	n/a
25	CTCF	chr8:3142180-3142330	HAc	cerebellar:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
26	CTCF	chr8:3142240-3142390	GM06990	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
27	CTCF	chr8:3141949-3142025	GM12878	blood:	n/a	n/a
28	CTCF	chr8:3142125-3142473	A549	lung:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
29	CTCF	chr8:3141600-3141750	GM12874	blood:	n/a	n/a
30	CTCF	chr8:3142220-3142370	GM12864	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
31	CTCF	chr8:3142166-3142389	GM13976	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
32	CTCF	chr8:3142240-3142390	HRE	kidney:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
33	CTCF	chr8:3141920-3142036	ProgFib	skin:	n/a	n/a
34	CTCF	chr8:3142200-3142350	HepG2	liver:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
35	CTCF	chr8:3141578-3141795	MCF-7	breast:	n/a	n/a
36	CTCF	chr8:3141600-3141750	SAEC	small airway:	n/a	n/a
37	CTCF	chr8:3142140-3142290	NHDF-neo	bronchial:	n/a	n/a
38	CTCF	chr8:3142574-3142582	GM10248	blood:	n/a	n/a
39	CTCF	chr8:3142220-3142370	GM12873	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
40	CTCF	chr8:3142106-3142418	K562	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
41	CTCF	chr8:3141629-3141697	HUVEC	blood vessel:	n/a	n/a
42	CTCF	chr8:3142154-3142410	GM19239	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
43	CTCF	chr8:3142240-3142390	NHDF-neo	bronchial:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
44	CTCF	chr8:3142134-3142423	T-47D	breast:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
45	CTCF	chr8:3142200-3142350	GM12874	blood:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
46	CTCF	chr8:3141582-3141775	Medullo	brain:	n/a	n/a
47	CTCF	chr8:3141640-3141790	HMF	breast:	n/a	n/a
48	CTCF	chr8:3141560-3141710	GM12869	blood:	n/a	n/a
49	CTCF	chr8:3142149-3142409	MCF-7	breast:	n/a	chr8:3142281-3142302 chr8:3142279-3142297
50	CTCF	chr8:3142105-3142390	A549	lung:	n/a	chr8:3142281-3142302 chr8:3142279-3142297

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:3141844-3141894	LNCaP	prostate:	n/a
2	chr8:3141844-3141894	LNCaP	prostate:	n/a
3	chr8:3141844-3141894	CMK	blood:	n/a
4	chr8:3141844-3141894	HRCEpiC	kidney:	n/a
5	chr8:3141907-3141957	BJ	skin:	n/a
6	chr8:3141844-3141894	GM12891	blood:	n/a
7	chr8:3141907-3141957	HIPEpiC	eye:	n/a
8	chr8:3141844-3141894	PrEC	prostate:	n/a
9	chr8:3141907-3141957	U87	brain:	n/a
10	chr8:3141844-3141894	K562	blood:	n/a
11	chr8:3141844-3141894	NB4	blood:	n/a
12	chr8:3141907-3141957	SK-N-SH	brain:	n/a
13	chr8:3141844-3141894	RPTEC	kidney:	n/a
14	chr8:3141907-3141957	HRE	kidney:	n/a
15	chr8:3141844-3141894	ovcar-3	ovarian:	n/a
16	chr8:3141844-3141894	HRPEpiC	eye:	n/a
17	chr8:3141907-3141957	HEK293	kidney:	embryo
18	chr8:3141907-3141957	HCM	heart:	n/a
19	chr8:3141844-3141894	HL-60	blood:	n/a
20	chr8:3141907-3141957	Jurkat	blood:	n/a
21	chr8:3141907-3141957	AG04449	skin:	fetal
22	chr8:3141907-3141957	SKMC	muscle:	n/a
23	chr8:3141907-3141957	AG09319	gingival:	n/a
24	chr8:3141844-3141894	NHDF-neo	bronchial:	n/a
25	chr8:3141844-3141894	A549	lung:	n/a
26	chr8:3141907-3141957	A549	lung:	n/a
27	chr8:3141844-3141894	ECC-1	luminal epithelium:	n/a
28	chr8:3141907-3141957	HCPEpiC	choroid plexus:	n/a
29	chr8:3141844-3141894	NHBE	bronchial:	n/a
30	chr8:3141844-3141894	Jurkat	blood:	n/a
31	chr8:3141844-3141894	HRE	kidney:	n/a
32	chr8:3141844-3141894	BE2_C	brain:	n/a
33	chr8:3141844-3141894	GM12892	blood:	n/a
34	chr8:3141844-3141894	SK-N-SH_RA	brain:	n/a
35	chr8:3141844-3141894	BJ	skin:	n/a
36	chr8:3141844-3141894	HEK293	kidney:	embryo
37	chr8:3141907-3141957	PANC-1	pancreas:	n/a
38	chr8:3141907-3141957	HL-60	blood:	n/a
39	chr8:3141844-3141894	AG09319	gingival:	n/a
40	chr8:3141844-3141894	SAEC	small airway:	n/a
41	chr8:3141907-3141957	Caco-2	colon:	n/a
42	chr8:3141907-3141957	GM06990	blood:	n/a
43	chr8:3141907-3141957	MCF-7	breast:	n/a
44	chr8:3141844-3141894	Hela-S3	cervix:	n/a
45	chr8:3141844-3141894	HMEC	breast:	n/a
46	chr8:3141844-3141894	HEEpiC	esophagus:	n/a
47	chr8:3141907-3141957	ProgFib	skin:	n/a
48	chr8:3141907-3141957	BE2_C	brain:	n/a
49	chr8:3141844-3141894	HUVEC	blood vessel:	n/a
50	chr8:3141844-3141894	HPAEpiC	pulmonary alveolar:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:3142221..3142747-chr8:3393835..3394631,2	MCF-7	breast:

Variant related genes	Relation type
CSMD1	TF binding region
CSMD1	CpG island

Extended variants
information (count: 159 )
Associated
traits (count: 124 )

Variant overlapped rSNPs/rCNVs (count:159 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536878853	chr8:3141216-3141217	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs556727054	chr8:3141218-3141219	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs1542106	chr8:3141219-3141220	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs539522629	chr8:3141251-3141252	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs552751909	chr8:3141254-3141255	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs74894931	chr8:3141263-3141264	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs566299732	chr8:3141277-3141278	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs535076431	chr8:3141282-3141283	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs184409044	chr8:3141289-3141290	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs372589617	chr8:3141294-3141295	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs534898981	chr8:3141313-3141314	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs575239931	chr8:3141322-3141323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs188354093	chr8:3141325-3141326	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs181227289	chr8:3141351-3141352	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs1542105	chr8:3141352-3141353	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs568617500	chr8:3141379-3141380	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs535857698	chr8:3141386-3141387	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs79647352	chr8:3141419-3141420	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs546297567	chr8:3141423-3141424	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs185619565	chr8:3141435-3141436	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs1542104	chr8:3141447-3141448	Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs7820671	chr8:3141453-3141454	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs1542103	chr8:3141458-3141459	Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs530709684	chr8:3141459-3141460	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs558359216	chr8:3141460-3141461	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs550411309	chr8:3141472-3141473	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs190759929	chr8:3141483-3141484	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs539224286	chr8:3141488-3141489	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs181037289	chr8:3141492-3141493	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs36069676	chr8:3141499-3141500	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs566421499	chr8:3141509-3141510	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs535474539	chr8:3141511-3141512	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs141066687	chr8:3141519-3141520	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs534698344	chr8:3141521-3141522	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs575264494	chr8:3141533-3141534	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs548200900	chr8:3141545-3141546	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs75649972	chr8:3141551-3141552	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs10099968	chr8:3141555-3141556	Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs372923249	chr8:3141569-3141570	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs577393067	chr8:3141575-3141576	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs546060294	chr8:3141581-3141582	Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs4875508	chr8:3141586-3141587	Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs573245859	chr8:3141607-3141608	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs541865472	chr8:3141614-3141615	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs144821836	chr8:3141616-3141617	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs147799365	chr8:3141624-3141625	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs569705017	chr8:3141632-3141633	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs369837210	chr8:3141649-3141650	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs371919823	chr8:3141685-3141686	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs141191857	chr8:3141695-3141696	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:124)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Ovarian cancer	22355333	CNVD
Breast cancer	21364760	CNVD
Cancer	20164920	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21829676	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Prostate cancer	17217626	CNVD
Developmental delay	19128483	CNVD
Neuroticism	17667963	CNVD
Leukoplakia	24403051	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	19805367	CNVD
Colorectal cancer	16774939	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	22014273	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:3141200-3141600	Enhancers	Fetal Kidney	kidney
2	chr8:3141400-3141600	Enhancers	Fetal Muscle Trunk	muscle
3	chr8:3141400-3142200	Active TSS	Brain Inferior Temporal Lobe	brain
4	chr8:3141600-3141800	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr8:3141600-3141800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
6	chr8:3141600-3141800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr8:3141600-3141800	Active TSS	Brain Cingulate Gyrus	brain
8	chr8:3141600-3141800	Enhancers	Brain Hippocampus Middle	brain
9	chr8:3141600-3141800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr8:3141600-3141800	Enhancers	Fetal Brain Male	brain
11	chr8:3141600-3141800	Active TSS	Fetal Brain Female	brain
12	chr8:3141600-3141800	Active TSS	Fetal Lung	lung
13	chr8:3141600-3142000	Enhancers	H1 Cell Line	embryonic stem cell
14	chr8:3141600-3142000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr8:3141600-3142000	Active TSS	Brain Germinal Matrix	brain
16	chr8:3141600-3142000	Active TSS	Duodenum Mucosa	Duodenum
17	chr8:3141600-3142000	Flanking Active TSS	Fetal Muscle Trunk	muscle
18	chr8:3141600-3142200	Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr8:3141600-3142200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
20	chr8:3141600-3142200	Flanking Active TSS	Fetal Kidney	kidney
21	chr8:3141800-3142000	Active TSS	ES-I3 Cell Line	embryonic stem cell
22	chr8:3141800-3142000	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
23	chr8:3141800-3142000	Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr8:3141800-3142000	Active TSS	Brain Anterior Caudate	brain
25	chr8:3141800-3142000	Active TSS	Brain Substantia Nigra	brain
26	chr8:3141800-3142000	Active TSS	Duodenum Smooth Muscle	Duodenum
27	chr8:3141800-3142000	Flanking Active TSS	Fetal Stomach	stomach
28	chr8:3141800-3142000	Enhancers	Pancreas	Pancrea
29	chr8:3141800-3142000	Enhancers	HMEC	breast
30	chr8:3141800-3142000	Enhancers	K562	blood
31	chr8:3141800-3142200	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
32	chr8:3141800-3142200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr8:3141800-3142200	Enhancers	H9 Cell Line	embryonic stem cell
34	chr8:3141800-3142200	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
35	chr8:3141800-3142200	Enhancers	HUES64 Cell Line	embryonic stem cell
36	chr8:3141800-3142200	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
37	chr8:3141800-3142200	Enhancers	Adipose Nuclei	Adipose
38	chr8:3141800-3142200	Active TSS	Brain Angular Gyrus	brain
39	chr8:3141800-3142200	Flanking Active TSS	Brain Cingulate Gyrus	brain
40	chr8:3141800-3142200	Flanking Active TSS	Brain Hippocampus Middle	brain
41	chr8:3141800-3142200	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
42	chr8:3141800-3142200	Flanking Active TSS	Fetal Brain Male	brain
43	chr8:3141800-3142200	Flanking Active TSS	Fetal Brain Female	brain
44	chr8:3141800-3142200	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
45	chr8:3141800-3142200	Flanking Active TSS	Fetal Lung	lung
46	chr8:3141800-3142200	Enhancers	Fetal Muscle Leg	muscle
47	chr8:3141800-3142200	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
48	chr8:3142000-3142200	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
49	chr8:3142000-3142200	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
50	chr8:3142000-3142200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links