Variant report
Variant | nsv610099 |
---|---|
Chromosome Location | chr8:7631008-8101641 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3834)
- CpG islands (count:4095)
- Chromatin interactive region (count:18)
- LncRNA region (count:40)
- Mature miRNA region (count: 1)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:8091892-8091896 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr8:8092931-8093297 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr8:8101412-8102391 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr8:8101041-8101072 | HepG2 | liver: | n/a | n/a |
5 | ATF1 | chr8:7771027-7771432 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr8:7694221-7694565 | K562 | blood: | n/a | n/a |
7 | ATF2 | chr8:8096080-8096557 | GM12878 | blood: | n/a | n/a |
8 | ATF3 | chr8:8096172-8096477 | K562 | blood: | n/a | n/a |
9 | BACH1 | chr8:7771106-7771311 | K562 | blood: | n/a | n/a |
10 | BATF | chr8:7922797-7923045 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr8:8005726-8005964 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr8:8029997-8030427 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr8:7809497-7809672 | GM12878 | blood: | n/a | chr8:7809580-7809591 |
14 | BATF | chr8:8086957-8087326 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr8:8035087-8035263 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr8:8005100-8005302 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr8:8000698-8001151 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr8:7896196-7896603 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr8:7936786-7937116 | GM12878 | blood: | n/a | chr8:7936968-7936979 |
20 | BATF | chr8:7994763-7995094 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr8:8007429-8007921 | GM12878 | blood: | n/a | chr8:8007742-8007750 |
22 | BATF | chr8:8030089-8030387 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr8:8091245-8091594 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr8:8000576-8001188 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr8:7994136-7994338 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr8:7949085-7949285 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr8:8086029-8086344 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr8:7896260-7896568 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr8:8085189-8085406 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr8:8004195-8004622 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr8:7804596-7805021 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr8:8096176-8096555 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr8:8043601-8043892 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr8:7812383-7812672 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr8:8095764-8096661 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr8:8025286-8025491 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr8:8005702-8005954 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr8:8056483-8056771 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr8:8086606-8086880 | GM12878 | blood: | n/a | chr8:8086859-8086869 |
40 | BATF | chr8:8056440-8056802 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr8:8000024-8000529 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr8:7936788-7937244 | GM12878 | blood: | n/a | chr8:7936968-7936979 |
43 | BATF | chr8:8004193-8004724 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr8:8025297-8025584 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr8:8086780-8087231 | GM12878 | blood: | n/a | chr8:8086859-8086869 |
46 | BATF | chr8:7744485-7744737 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr8:7809440-7809731 | GM12878 | blood: | n/a | chr8:7809580-7809591 |
48 | BATF | chr8:8007454-8008025 | GM12878 | blood: | n/a | chr8:8007742-8007750 |
49 | BCL11A | chr8:8023210-8023461 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr8:8007410-8007710 | GM12878 | blood: | n/a | chr8:8007656-8007665 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:7881548-7881598 | ECC-1 | luminal epithelium: | n/a |
2 | chr8:7888738-7888788 | H1-hESC | embryonic stem cell: | embryo |
3 | chr8:7886076-7886126 | ovcar-3 | ovarian: | n/a |
4 | chr8:7885761-7885811 | ProgFib | skin: | n/a |
5 | chr8:7706073-7706123 | PANC-1 | pancreas: | n/a |
6 | chr8:7880727-7880777 | HNPCEpiC | eye: | n/a |
7 | chr8:8085532-8085582 | PrEC | prostate: | n/a |
8 | chr8:7880088-7880138 | Caco-2 | colon: | n/a |
9 | chr8:7881548-7881598 | ECC-1 | luminal epithelium: | n/a |
10 | chr8:7888738-7888788 | H1-hESC | embryonic stem cell: | embryo |
11 | chr8:7886076-7886126 | ovcar-3 | ovarian: | n/a |
12 | chr8:7885761-7885811 | ProgFib | skin: | n/a |
13 | chr8:7706073-7706123 | PANC-1 | pancreas: | n/a |
14 | chr8:7880727-7880777 | HNPCEpiC | eye: | n/a |
15 | chr8:8085532-8085582 | PrEC | prostate: | n/a |
16 | chr8:7880088-7880138 | Caco-2 | colon: | n/a |
17 | chr8:8086144-8086194 | GM12878 | blood: | n/a |
18 | chr8:8085544-8085594 | ovcar-3 | ovarian: | n/a |
19 | chr8:7884052-7884102 | HMEC | breast: | n/a |
20 | chr8:7721128-7721178 | HRE | kidney: | n/a |
21 | chr8:7886076-7886126 | NB4 | blood: | n/a |
22 | chr8:8085973-8086023 | GM12892 | blood: | n/a |
23 | chr8:7651924-7651974 | GM06990 | blood: | n/a |
24 | chr8:7651924-7651974 | HIPEpiC | eye: | n/a |
25 | chr8:7686204-7686254 | IMR90 | lung: | fetal |
26 | chr8:8085496-8085546 | NB4 | blood: | n/a |
27 | chr8:7631923-7631973 | AG09309 | skin: | n/a |
28 | chr8:7631469-7631519 | ProgFib | skin: | n/a |
29 | chr8:8085496-8085546 | AG09309 | skin: | n/a |
30 | chr8:8085496-8085546 | AG09319 | gingival: | n/a |
31 | chr8:7706073-7706123 | HRPEpiC | eye: | n/a |
32 | chr8:8084610-8084660 | HMEC | breast: | n/a |
33 | chr8:7881548-7881598 | HCM | heart: | n/a |
34 | chr8:8085532-8085582 | NH-A | brain: | n/a |
35 | chr8:8086686-8086736 | GM12892 | blood: | n/a |
36 | chr8:7754234-7754284 | HRCEpiC | kidney: | n/a |
37 | chr8:8084974-8085024 | ECC-1 | luminal epithelium: | n/a |
38 | chr8:7650102-7650152 | HCT-116 | colon: | n/a |
39 | chr8:7923629-7923679 | HCPEpiC | choroid plexus: | n/a |
40 | chr8:8085544-8085594 | HEK293 | kidney: | embryo |
41 | chr8:7888738-7888788 | HRE | kidney: | n/a |
42 | chr8:7867451-7867501 | A549 | lung: | n/a |
43 | chr8:7753688-7753738 | CMK | blood: | n/a |
44 | chr8:7873837-7873887 | HCF | heart: | n/a |
45 | chr8:8034602-8034652 | HCPEpiC | choroid plexus: | n/a |
46 | chr8:7885901-7885951 | Jurkat | blood: | n/a |
47 | chr8:7671497-7671547 | HL-60 | blood: | n/a |
48 | chr8:7671497-7671547 | PANC-1 | pancreas: | n/a |
49 | chr8:7885761-7885811 | Hela-S3 | cervix: | n/a |
50 | chr8:7639801-7639851 | ProgFib | skin: | n/a |
(count:18 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:8093979..8097330-chr8:8100546..8105094,4 | K562 | blood: | |
2 | chr6:26031709..26032614-chr8:8085130..8085961,2 | Hela-S3 | cervix: | |
3 | chr8:8094651..8097727-chr8:8099626..8103713,3 | MCF-7 | breast: | |
4 | chr8:8092255..8094353-chr8:8097556..8100076,2 | K562 | blood: | |
5 | chr15:59062813..59063449-chr8:8085838..8086625,2 | Hela-S3 | cervix: | |
6 | chr8:8086683..8088508-chr8:8193858..8196209,2 | MCF-7 | breast: | |
7 | chr8:8093979..8096897-chr8:8099466..8105094,8 | K562 | blood: | |
8 | chr8:8084641..8087551-chr8:8098301..8100358,2 | K562 | blood: | |
9 | chr11:3443497..3444149-chr8:8085706..8086350,2 | HCT-116 | colon: | |
10 | chr8:8084641..8087551-chr8:8098301..8100358,2 | K562 | blood: | |
11 | chr8:8094096..8094629-chr8:8147947..8148540,2 | MCF-7 | breast: | |
12 | chr8:8094104..8094693-chr8:8146401..8147333,2 | MCF-7 | breast: | |
13 | chr8:8094651..8097727-chr8:8099626..8103713,3 | MCF-7 | breast: | |
14 | chr8:8092255..8094353-chr8:8097556..8100076,2 | K562 | blood: | |
15 | chr8:8093979..8096897-chr8:8099466..8105094,8 | K562 | blood: | |
16 | chr3:129829770..129830533-chr8:8085798..8086673,3 | Hela-S3 | cervix: | |
17 | chr8:8093979..8097330-chr8:8100546..8105094,4 | K562 | blood: | |
18 | chr8:7255181..7256067-chr8:7770740..7771265,2 | MCF-7 | breast: |
(count:40 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-PRAGMIN.1-7 | chr8:8097017-8097128 | NONHSAT124860 |
2 | lnc-PRAGMIN.1-3 | chr8:8077566-8077704 | ENSG00000253893.2 |
3 | lnc-PRAGMIN.1-7 | chr8:8095696-8095860 | NONHSAT124863 |
4 | lnc-PRAGMIN.1-7 | chr8:8097728-8097835 | NONHSAT124863 |
5 | lnc-PRAGMIN.1-3 | chr8:8084256-8084265 | XLOC_006994 |
6 | lnc-PRAGMIN.1-3 | chr8:8081348-8081432 | XLOC_006993 |
7 | lnc-PRAGMIN.1-3 | chr8:8081348-8081409 | ENSG00000253893.1 |
8 | lnc-PRAGMIN.1-3 | chr8:7992174-7992262 | ENSG00000253893.1 |
9 | lnc-AC068020.1-1 | chr8:8098797-8099202 | NONHSAT124867 |
10 | lnc-AC068020.1-1 | chr8:8099150-8099484 | NONHSAT124868 |
11 | lnc-AC068020.1-1 | chr8:8094730-8094797 | NONHSAT124861 |
12 | lnc-PRAGMIN.1-7 | chr8:8097960-8098070 | NONHSAT124863 |
13 | lnc-PRAGMIN.1-3 | chr8:8077586-8077704 | XLOC_006993 |
14 | lnc-PRAGMIN.1-7 | chr8:8097015-8097098 | NONHSAT124863 |
15 | lnc-DEFB105A-4 | chr8:7854986-7855043 | NONHSAT124844 |
16 | lnc-AC068020.1-1 | chr8:8101621-8101684 | NONHSAT124868 |
17 | lnc-PRAGMIN.1-3 | chr8:8077566-8077704 | ENSG00000253893.1 |
18 | lnc-AC068020.1-1 | chr8:8101621-8102385 | NONHSAT124866 |
19 | lnc-PRAGMIN.1-3 | chr8:8025339-8025605 | ENSG00000253893.1 |
20 | lnc-PRAGMIN.1-3 | chr8:8084842-8085129 | XLOC_006994 |
21 | lnc-PRAGMIN.1-3 | chr8:8083918-8084136 | ENSG00000253893.2 |
22 | lnc-PRAGMIN.1-7 | chr8:8093525-8093885 | NONHSAT124858 |
23 | lnc-PRAGMIN.1-3 | chr8:8042248-8042354 | ENSG00000253893.2 |
24 | lnc-PRAGMIN.1-7 | chr8:8094648-8095823 | NONHSAT124860 |
25 | lnc-PRAGMIN.1-3 | chr8:8042248-8042354 | ENSG00000253893.1 |
26 | lnc-PRAGMIN.1-7 | chr8:8095713-8095872 | NONHSAT124858 |
27 | lnc-AC068020.1-2 | chr8:7996388-7996558 | NONHSAT124852 |
28 | lnc-PRAGMIN.1-10 | chr8:7974267-7974471 | NONHSAT124849 |
29 | lnc-DEFB105A-4 | chr8:7847937-7848142 | NONHSAT124844 |
30 | lnc-PRAGMIN.1-3 | chr8:8083918-8084265 | ENSG00000253893.1 |
31 | lnc-DEFB105A-1 | chr8:7748525-7750077 | NONHSAT124838 |
32 | lnc-PRAGMIN.1-11 | chr8:7943544-7944287 | NONHSAT124847 |
33 | lnc-PRAGMIN.1-3 | chr8:8081348-8081409 | ENSG00000253893.2 |
34 | lnc-AC068020.1-2 | chr8:7997454-7997523 | NONHSAT124852 |
35 | lnc-AC068020.1-1 | chr8:8101621-8101707 | NONHSAT124867 |
36 | lnc-PRAGMIN.1-7 | chr8:8098818-8098933 | NONHSAT124863 |
37 | lnc-AC068020.1-1 | chr8:8097891-8099954 | NONHSAT124866 |
38 | lnc-PRAGMIN.1-3 | chr8:8084720-8085385 | ENSG00000253893.1 |
39 | lnc-PRAGMIN.1-3 | chr8:8025341-8025605 | ENSG00000253893.2 |
40 | lnc-AC068020.1-1 | chr8:8095815-8096448 | NONHSAT124861 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-548i | chr8:7946552-7946573 | MIMAT0005935_2 |
No data |
Variant related genes | Relation type |
---|---|
OR7E96P | TF binding region |
FAM90A12P | TF binding region |
DEFB107A | TF binding region |
FAM90A11P | TF binding region |
ENSG00000253881 | TF binding region |
FAM90A24P | TF binding region |
FAM66E | TF binding region |
FAM86B3P | TF binding region |
FAM85B | TF binding region |
ENSG00000254776 | TF binding region |
DEFB105A | TF binding region |
ENPP7P1 | TF binding region |
MIR548I3 | TF binding region |
HSPD1P2 | TF binding region |
ZNF705B | TF binding region |
PRR23D2 | TF binding region |
ENSG00000255459 | TF binding region |
DEFB4A | TF binding region |
USP17L8 | TF binding region |
SPAG11A | TF binding region |
USP17L3 | TF binding region |
ENSG00000268955 | TF binding region |
ENSG00000244427 | TF binding region |
ENSG00000221027 | TF binding region |
DEFB103A | TF binding region |
ENSG00000254311 | TF binding region |
DEFB104A | TF binding region |
ENSG00000215977 | TF binding region |
DEFB108P1 | TF binding region |
ENSG00000255211 | TF binding region |
ALG1L13P | TF binding region |
ENSG00000205989 | TF binding region |
DEFB106A | TF binding region |
OR7E96P | CpG island |
FAM90A12P | CpG island |
DEFB107A | CpG island |
FAM90A11P | CpG island |
ENSG00000253881 | CpG island |
FAM90A24P | CpG island |
FAM66E | CpG island |
FAM86B3P | CpG island |
FAM85B | CpG island |
ENSG00000254776 | CpG island |
DEFB105A | CpG island |
ENPP7P1 | CpG island |
MIR548I3 | CpG island |
HSPD1P2 | CpG island |
ZNF705B | CpG island |
PRR23D2 | CpG island |
ENSG00000255459 | CpG island |
DEFB4A | CpG island |
USP17L8 | CpG island |
SPAG11A | CpG island |
USP17L3 | CpG island |
ENSG00000268955 | CpG island |
ENSG00000244427 | CpG island |
ENSG00000221027 | CpG island |
DEFB103A | CpG island |
ENSG00000254311 | CpG island |
DEFB104A | CpG island |
ENSG00000215977 | CpG island |
DEFB108P1 | CpG island |
ENSG00000255211 | CpG island |
ALG1L13P | CpG island |
ENSG00000205989 | CpG island |
DEFB106A | CpG island |
ENSG00000124693 | chromatin interactions |
ENSG00000253981 | chromatin interactions |
ENSG00000173295 | chromatin interactions |
ENSG00000128923 | chromatin interactions |
ENSG00000166492 | chromatin interactions |
ENSG00000253540 | chromatin interactions |
ENSG00000245975 | chromatin interactions |
UBQLN1 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs201910128 | chr8:7640939-7640940 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs200534249 | chr8:7641022-7641023 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs201423419 | chr8:7641033-7641034 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs202164484 | chr8:7641089-7641090 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs200525847 | chr8:7641128-7641129 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs201423313 | chr8:7641190-7641191 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs548695709 | chr8:7641345-7641346 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs565419946 | chr8:7641372-7641373 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs576970852 | chr8:7641382-7641383 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs377084098 | chr8:7641404-7641405 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs557952166 | chr8:7641428-7641429 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs571702718 | chr8:7641477-7641478 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs375926640 | chr8:7641574-7641575 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs537788754 | chr8:7641598-7641599 | Active TSS | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs557366674 | chr8:7641754-7641755 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs185146342 | chr8:7641765-7641766 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs2954330 | chr8:7657047-7657048 | Inactive region | TF binding regionCpG island | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs200882271 | chr8:7675478-7675479 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs554684538 | chr8:7680894-7680895 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs200147309 | chr8:7682178-7682179 | Inactive region | CpG island | 2 gene(s) | Overlapped CNVs | n/a |
21 | rs574497755 | chr8:7684269-7684270 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs541543635 | chr8:7685640-7685641 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs570475597 | chr8:7686208-7686209 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs539098974 | chr8:7686211-7686212 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs150372518 | chr8:7686216-7686217 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs556344742 | chr8:7686228-7686229 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs569903827 | chr8:7686236-7686237 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs535791008 | chr8:7686250-7686251 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs538700855 | chr8:7690490-7690491 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs551171989 | chr8:7690534-7690535 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs571101140 | chr8:7690561-7690562 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs201923598 | chr8:7690709-7690710 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs536998581 | chr8:7690724-7690725 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs9773211 | chr8:7692059-7692060 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs565182133 | chr8:7692140-7692141 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs561279721 | chr8:7692154-7692155 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs200823870 | chr8:7692161-7692162 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs575088402 | chr8:7692277-7692278 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs540561793 | chr8:7692298-7692299 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs185967614 | chr8:7693516-7693517 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs148826727 | chr8:7693542-7693543 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs532399771 | chr8:7693547-7693548 | Inactive region | CpG island | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs60249228 | chr8:7693605-7693606 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
44 | rs147561244 | chr8:7693618-7693619 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
45 | rs2740691 | chr8:7693670-7693671 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
46 | rs376178791 | chr8:7693682-7693683 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
47 | rs534148564 | chr8:7693690-7693691 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
48 | rs553922227 | chr8:7693709-7693710 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
49 | rs577125808 | chr8:7693725-7693726 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
50 | rs546076264 | chr8:7693734-7693735 | Bivalent Enhancer | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Ovarian clear cell carcinoma | 21343371 | CNVD |
abnormal development | 18461090 | CNVD |
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
Prostate cancer | 16573809 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Autism | 22495311 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Lung squamous cell carcinoma | 22363434 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Breast cancer | 21990379 | CNVD |
Psoriasis | 20403174 | CNVD |
Psoriasis | 20663923 | CNVD |
Crohn''s disease | 16909382 | CNVD |
Cancer | 21129771 | CNVD |
Congenital diaphragmatic hernia | 21085971 | CNVD |
Crohn''s disease | 20877625 | CNVD |
Inflammatory disorder | 20877625 | CNVD |
Cardiac defect | 21933911 | CNVD |
Psoriasis | 18059266 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Psoriasis | 20877625 | CNVD |
Mental retardation | 17847001 | CNVD |
Prostate cancer | 17217626 | CNVD |
Schizophrenia | 21399695 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Psoriasis | 18848619 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Colorectal cancer | 17229543 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Bladder cancer | 21909424 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 17142309 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 20369283 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 21364760 | CNVD |
Developmental disorder | 20461109 | CNVD |
Crohn''s disease | 17953491 | CNVD |
Immune disease | 21076436 | CNVD |
Crohn''s disease | 21956041 | CNVD |
Autism | 21865298 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Breast cancer | 22522925 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Systemic lupus erythematosus | 22302058 | CNVD |
Schizophrenia | 23813976 | CNVD |
Schizophrenia | 21346763 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:7641200-7641600 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
2 | chr8:7641200-7641600 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
3 | chr8:7641200-7641600 | Active TSS | Primary T cells fromperipheralblood | blood |
4 | chr8:7641200-7641600 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
5 | chr8:7641200-7641600 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
6 | chr8:7641200-7641600 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
7 | chr8:7641200-7641600 | Active TSS | Skeletal Muscle Female | skeletal muscle |
8 | chr8:7641200-7641600 | Active TSS | Stomach Smooth Muscle | stomach |
9 | chr8:7693600-7693800 | Bivalent Enhancer | Duodenum Mucosa | Duodenum |
10 | chr8:7694200-7694400 | Enhancers | Brain Anterior Caudate | brain |
11 | chr8:7720200-7721000 | Enhancers | Muscle Satellite Cultured Cells | -- |
12 | chr8:7721000-7721200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
13 | chr8:7721000-7721200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
14 | chr8:7721000-7721200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
15 | chr8:7721000-7721200 | Enhancers | HSMM | muscle |
16 | chr8:7721000-7721200 | Enhancers | HSMMtube | muscle |
17 | chr8:7721000-7721400 | Enhancers | H1 Cell Line | embryonic stem cell |
18 | chr8:7721000-7721400 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
19 | chr8:7721000-7721400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
20 | chr8:7721000-7721400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
21 | chr8:7721000-7721400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
22 | chr8:7721000-7721400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
23 | chr8:7721000-7721400 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
24 | chr8:7721000-7721400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
25 | chr8:7721000-7721400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
26 | chr8:7721000-7721400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
27 | chr8:7721000-7721400 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
28 | chr8:7721000-7721400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
29 | chr8:7721000-7721400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
30 | chr8:7721000-7721400 | Enhancers | NHEK | skin |
31 | chr8:7721000-7721400 | Enhancers | Osteobl | bone |
32 | chr8:7731200-7731600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
33 | chr8:7731400-7731800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
34 | chr8:7731400-7732400 | Enhancers | Muscle Satellite Cultured Cells | -- |
35 | chr8:7731800-7732200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
36 | chr8:7732200-7732400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
37 | chr8:7732400-7736400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
38 | chr8:7736400-7736800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
39 | chr8:7746200-7746600 | Enhancers | Dnd41 | blood |
40 | chr8:7746600-7746800 | Weak transcription | Dnd41 | blood |
41 | chr8:7746800-7747200 | Enhancers | Dnd41 | blood |
42 | chr8:7747200-7752000 | Weak transcription | Dnd41 | blood |
43 | chr8:7750000-7750800 | Enhancers | Stomach Mucosa | stomach |
44 | chr8:7752000-7752400 | Enhancers | Dnd41 | blood |
45 | chr8:7759600-7760000 | Enhancers | Osteobl | bone |
46 | chr8:7770200-7770400 | Enhancers | Muscle Satellite Cultured Cells | -- |
47 | chr8:7770200-7771200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
48 | chr8:7770200-7771200 | Enhancers | Osteobl | bone |
49 | chr8:7770200-7771400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
50 | chr8:7770400-7770600 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |