Variant report

Variant	nsv610151
Chromosome Location	chr8:8098079-8168413
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2509)
CpG islands
(count:427)
Chromatin interactive
region (count:95)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2509 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:8101412-8102391	K562	blood:	n/a	n/a
2	ARID3A	chr8:8146721-8147360	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:8101041-8101072	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:8136392-8136433	K562	blood:	n/a	n/a
5	ARID3A	chr8:8130676-8131061	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:8146105-8146305	K562	blood:	n/a	n/a
7	ARID3A	chr8:8127880-8128214	HepG2	liver:	n/a	n/a
8	ARID3A	chr8:8105348-8105599	HepG2	liver:	n/a	n/a
9	ARID3A	chr8:8111412-8112067	HepG2	liver:	n/a	n/a
10	ARID3A	chr8:8168067-8168711	HepG2	liver:	n/a	n/a
11	ARID3A	chr8:8145751-8146493	HepG2	liver:	n/a	n/a
12	ARID3A	chr8:8105314-8105669	K562	blood:	n/a	n/a
13	ARID3A	chr8:8126032-8126609	HepG2	liver:	n/a	n/a
14	ARID3A	chr8:8127158-8127358	HepG2	liver:	n/a	n/a
15	ARID3A	chr8:8153309-8154087	HepG2	liver:	n/a	chr8:8153925-8153940
16	ARID3A	chr8:8102923-8103018	K562	blood:	n/a	n/a
17	ARID3A	chr8:8114109-8114421	HepG2	liver:	n/a	n/a
18	ATF1	chr8:8101961-8102473	K562	blood:	n/a	n/a
19	ATF1	chr8:8118490-8118523	K562	blood:	n/a	n/a
20	ATF1	chr8:8144090-8144415	K562	blood:	n/a	n/a
21	ATF2	chr8:8136646-8137350	GM12878	blood:	n/a	n/a
22	ATF2	chr8:8141766-8142478	GM12878	blood:	n/a	n/a
23	ATF2	chr8:8158679-8159743	GM12878	blood:	n/a	n/a
24	ATF2	chr8:8143907-8144515	GM12878	blood:	n/a	n/a
25	ATF2	chr8:8141903-8142578	GM12878	blood:	n/a	n/a
26	ATF2	chr8:8158969-8159778	GM12878	blood:	n/a	n/a
27	ATF2	chr8:8143978-8144540	GM12878	blood:	n/a	n/a
28	ATF2	chr8:8126192-8126618	GM12878	blood:	n/a	n/a
29	ATF2	chr8:8126203-8126652	GM12878	blood:	n/a	n/a
30	ATF3	chr8:8153449-8154089	A549	lung:	n/a	n/a
31	ATF3	chr8:8101821-8102415	K562	blood:	n/a	n/a
32	ATF3	chr8:8167822-8168897	A549	lung:	n/a	n/a
33	ATF3	chr8:8145665-8146549	A549	lung:	n/a	n/a
34	ATF3	chr8:8145708-8146540	HCT-116	colon:	n/a	n/a
35	ATF3	chr8:8145728-8146513	A549	lung:	n/a	n/a
36	ATF3	chr8:8145720-8146548	HCT-116	colon:	n/a	n/a
37	ATF3	chr8:8127796-8128282	A549	lung:	n/a	n/a
38	ATF3	chr8:8153340-8154270	A549	lung:	n/a	n/a
39	ATF3	chr8:8167882-8168579	A549	lung:	n/a	n/a
40	ATF3	chr8:8101985-8102287	K562	blood:	n/a	n/a
41	BACH1	chr8:8130683-8130937	K562	blood:	n/a	n/a
42	BATF	chr8:8141982-8142461	GM12878	blood:	n/a	n/a
43	BATF	chr8:8144007-8144450	GM12878	blood:	n/a	n/a
44	BATF	chr8:8158774-8159672	GM12878	blood:	n/a	n/a
45	BATF	chr8:8137532-8137784	GM12878	blood:	n/a	chr8:8137667-8137678 chr8:8137668-8137678
46	BATF	chr8:8130779-8131070	GM12878	blood:	n/a	n/a
47	BATF	chr8:8126185-8126638	GM12878	blood:	n/a	chr8:8126405-8126416 chr8:8126421-8126431 chr8:8126417-8126427 chr8:8126420-8126431
48	BATF	chr8:8136381-8136667	GM12878	blood:	n/a	n/a
49	BATF	chr8:8158796-8159721	GM12878	blood:	n/a	n/a
50	BATF	chr8:8144052-8144469	GM12878	blood:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:8102121-8102171	IMR90	lung:	fetal
2	chr8:8131077-8131127	ovcar-3	ovarian:	n/a
3	chr8:8102121-8102171	AoSMC	blood vessel:	n/a
4	chr8:8102121-8102171	SK-N-MC	brain:	n/a
5	chr8:8153650-8153700	Caco-2	colon:	n/a
6	chr8:8146129-8146179	SKMC	muscle:	n/a
7	chr8:8131077-8131127	AG04450	lung:	fetal
8	chr8:8162989-8163039	NHDF-neo	bronchial:	n/a
9	chr8:8146129-8146179	HPAEpiC	pulmonary alveolar:	n/a
10	chr8:8131077-8131127	PrEC	prostate:	n/a
11	chr8:8102121-8102171	NHBE	bronchial:	n/a
12	chr8:8146129-8146179	GM12878	blood:	n/a
13	chr8:8146129-8146179	PFSK-1	brain:	n/a
14	chr8:8153650-8153700	AG09319	gingival:	n/a
15	chr8:8131077-8131127	HAEpiC	amniotic membrane:	n/a
16	chr8:8102392-8102442	HRCEpiC	kidney:	n/a
17	chr8:8102121-8102171	SK-N-SH	brain:	n/a
18	chr8:8162989-8163039	Caco-2	colon:	n/a
19	chr8:8131077-8131127	A549	lung:	n/a
20	chr8:8102121-8102171	HMEC	breast:	n/a
21	chr8:8131077-8131127	ECC-1	luminal epithelium:	n/a
22	chr8:8146129-8146179	IMR90	lung:	fetal
23	chr8:8120624-8120674	GM12891	blood:	n/a
24	chr8:8153650-8153700	SKMC	muscle:	n/a
25	chr8:8146129-8146179	GM12892	blood:	n/a
26	chr8:8120624-8120674	CMK	blood:	n/a
27	chr8:8131077-8131127	HRCEpiC	kidney:	n/a
28	chr8:8131077-8131127	RPTEC	kidney:	n/a
29	chr8:8120624-8120674	HMEC	breast:	n/a
30	chr8:8102392-8102442	PrEC	prostate:	n/a
31	chr8:8153650-8153700	NHDF-neo	bronchial:	n/a
32	chr8:8153650-8153700	HEK293	kidney:	embryo
33	chr8:8120624-8120674	Jurkat	blood:	n/a
34	chr8:8102121-8102171	U87	brain:	n/a
35	chr8:8102392-8102442	A549	lung:	n/a
36	chr8:8146129-8146179	AG10803	skin:	n/a
37	chr8:8162989-8163039	K562	blood:	n/a
38	chr8:8120624-8120674	Hela-S3	cervix:	n/a
39	chr8:8162989-8163039	AG10803	skin:	n/a
40	chr8:8120624-8120674	NHDF-neo	bronchial:	n/a
41	chr8:8153650-8153700	NHBE	bronchial:	n/a
42	chr8:8131077-8131127	HepG2	liver:	n/a
43	chr8:8120624-8120674	GM12892	blood:	n/a
44	chr8:8131077-8131127	PANC-1	pancreas:	n/a
45	chr8:8102392-8102442	HNPCEpiC	eye:	n/a
46	chr8:8153650-8153700	HCT-116	colon:	n/a
47	chr8:8153650-8153700	T-47D	breast:	n/a
48	chr8:8102392-8102442	HEEpiC	esophagus:	n/a
49	chr8:8146129-8146179	SK-N-SH_RA	brain:	n/a
50	chr8:8153650-8153700	HUVEC	blood vessel:	n/a

(count:95 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr8:8140760..8143388-chr8:8146728..8148425,2	K562	blood:
2	chr8:8147508..8148471-chr8:8365206..8366162,5	MCF-7	breast:
3	chr8:8118434..8122893-chr8:8123384..8125953,5	MCF-7	breast:
4	chr8:8146352..8147329-chr8:8172122..8173007,5	MCF-7	breast:
5	chr8:8084641..8087551-chr8:8098301..8100358,2	K562	blood:
6	chr8:8101157..8102709-chr8:8124508..8126459,2	MCF-7	breast:
7	chr8:8101610..8104279-chr8:8111391..8114092,2	K562	blood:
8	chr8:8146274..8147281-chr8:8365228..8366135,6	MCF-7	breast:
9	chr8:8094651..8097727-chr8:8099626..8103713,3	MCF-7	breast:
10	chr8:8098254..8100230-chr8:8106571..8108592,2	K562	blood:
11	chr8:8118434..8122893-chr8:8123384..8125953,5	MCF-7	breast:
12	chr8:8105365..8106008-chr8:8526894..8527465,2	K562	blood:
13	chr8:8151935..8153565-chr8:8167280..8169778,2	MCF-7	breast:
14	chr8:8151935..8153565-chr8:8167280..8169778,2	MCF-7	breast:
15	chr8:8146657..8147172-chr8:8172119..8172832,2	MCF-7	breast:
16	chr8:8128010..8130864-chr8:8317877..8319814,2	MCF-7	breast:
17	chr8:8131655..8133179-chr8:8135431..8137292,2	MCF-7	breast:
18	chr8:8168175..8169902-chr8:8242938..8245869,2	MCF-7	breast:
19	chr8:8138288..8140321-chr8:8142532..8144155,2	MCF-7	breast:
20	chr8:8155614..8158517-chr8:8163567..8165783,2	MCF-7	breast:
21	chr8:8154932..8157234-chrX:48930489..48933092,2	MCF-7	breast:
22	chr8:8152575..8156744-chr8:8165539..8169727,4	MCF-7	breast:
23	chr8:8151372..8154142-chr8:8175847..8177840,2	MCF-7	breast:
24	chr8:8134161..8136694-chr8:8559309..8560894,2	MCF-7	breast:
25	chr8:8153909..8155842-chr8:8254348..8256276,2	MCF-7	breast:
26	chr8:8146386..8147240-chr8:8365579..8366086,2	MCF-7	breast:
27	chr8:8145925..8147772-chr8:8172599..8174671,2	MCF-7	breast:
28	chr8:8093979..8096897-chr8:8099466..8105094,8	K562	blood:
29	chr8:8145045..8147805-chr8:8168275..8170393,2	MCF-7	breast:
30	chr8:8146402..8147201-chr8:8172122..8172875,3	MCF-7	breast:
31	chr8:8104258..8105835-chr8:8243426..8245376,2	MCF-7	breast:
32	chr8:8142616..8145069-chr8:8226333..8228141,2	MCF-7	breast:
33	chr8:8142878..8144520-chr8:8146399..8149197,2	MCF-7	breast:
34	chr8:8092255..8094353-chr8:8097556..8100076,2	K562	blood:
35	chr8:8152575..8156744-chr8:8165539..8169727,4	MCF-7	breast:
36	chr8:8126193..8127836-chr8:8129384..8131743,2	MCF-7	breast:
37	chr8:8163385..8165177-chr8:8167014..8169330,2	MCF-7	breast:
38	chr8:8147966..8148515-chr8:8336160..8336710,2	MCF-7	breast:
39	chr8:8093979..8097330-chr8:8100546..8105094,4	K562	blood:
40	chr8:8155614..8158517-chr8:8163567..8165783,2	MCF-7	breast:
41	chr8:8131655..8133179-chr8:8135431..8137292,2	MCF-7	breast:
42	chr8:8145815..8148362-chr8:8152420..8155525,4	MCF-7	breast:
43	chr8:8138288..8140321-chr8:8142532..8144155,2	MCF-7	breast:
44	chr8:8147573..8150272-chr8:8166843..8168780,2	MCF-7	breast:
45	chr8:8147727..8148466-chr8:8172098..8172982,3	MCF-7	breast:
46	chr8:8134812..8136654-chr8:8146118..8147961,3	K562	blood:
47	chr8:8146302..8147264-chr8:8365295..8366108,2	MCF-7	breast:
48	chr8:8146324..8147133-chr8:8168152..8168656,2	MCF-7	breast:
49	chr8:8130421..8131300-chr8:8175825..8176932,3	K562	blood:
50	chr8:8144375..8149679-chr8:8240479..8246459,10	MCF-7	breast:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRAGMIN.1-6	chr8:8150269-8151573	NONHSAT124869
2	lnc-AC068020.1-1	chr8:8101621-8102385	NONHSAT124866
3	lnc-AC068020.1-1	chr8:8097891-8099954	NONHSAT124866
4	lnc-AC068020.1-1	chr8:8098797-8099202	NONHSAT124867
5	lnc-AC068020.1-1	chr8:8101621-8101707	NONHSAT124867
6	lnc-PRAGMIN.1-7	chr8:8098818-8098933	NONHSAT124863
7	lnc-AC068020.1-1	chr8:8101621-8101684	NONHSAT124868
8	lnc-AC068020.1-1	chr8:8099150-8099484	NONHSAT124868
9	lnc-PRAGMIN.1-6	chr8:8151715-8152356	NONHSAT124869

No data

Variant related genes	Relation type
FAM86B3P	TF binding region
ALG1L13P	TF binding region
FAM86B3P	CpG island
ALG1L13P	CpG island
ENSG00000196998	chromatin interactions
ENSG00000173295	chromatin interactions
ENSG00000176305	chromatin interactions
ENSG00000253958	chromatin interactions
ENSG00000253981	chromatin interactions
ENSG00000145592	chromatin interactions
ENSG00000254153	chromatin interactions
ENSG00000105281	chromatin interactions
ENSG00000243279	chromatin interactions
ENSG00000182319	chromatin interactions

Extended variants
information (count: 3956 )
Associated
traits (count: 145 )

Variant overlapped rSNPs/rCNVs (count:3956 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2955587	chr8:8098079-8098080	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs551006850	chr8:8098084-8098085	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
3	rs571828370	chr8:8098093-8098094	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
4	rs71513183	chr8:8098097-8098098	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
5	rs557241441	chr8:8098113-8098114	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
6	rs186432849	chr8:8098114-8098115	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
7	rs189321816	chr8:8098130-8098131	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
8	rs180959848	chr8:8098153-8098154	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
9	rs186007055	chr8:8098161-8098162	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
10	rs1712646	chr8:8098169-8098170	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs565313771	chr8:8098176-8098177	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
12	rs577825507	chr8:8098185-8098186	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
13	rs372155049	chr8:8098186-8098187	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
14	rs563289132	chr8:8098193-8098194	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
15	rs373647303	chr8:8098205-8098206	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
16	rs375036581	chr8:8098208-8098209	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
17	rs548802963	chr8:8098209-8098210	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
18	rs559018178	chr8:8098218-8098219	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
19	rs528201452	chr8:8098236-8098237	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
20	rs74614308	chr8:8098252-8098253	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
21	rs367784954	chr8:8098261-8098262	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
22	rs571240111	chr8:8098266-8098267	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
23	rs190917280	chr8:8098276-8098277	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
24	rs551260036	chr8:8098285-8098286	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
25	rs183008595	chr8:8098302-8098303	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
26	rs186337682	chr8:8098329-8098330	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
27	rs553651946	chr8:8098346-8098347	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
28	rs202082911	chr8:8098413-8098414	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
29	rs573357804	chr8:8098416-8098417	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
30	rs111753215	chr8:8098432-8098433	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
31	rs558652021	chr8:8098495-8098496	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
32	rs111281875	chr8:8098500-8098501	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
33	rs543311108	chr8:8098514-8098515	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
34	rs557211279	chr8:8098518-8098519	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
35	rs371584633	chr8:8098526-8098527	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
36	rs542389756	chr8:8098527-8098528	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
37	rs144766500	chr8:8098528-8098529	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
38	rs528141168	chr8:8098569-8098570	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
39	rs545111151	chr8:8098576-8098577	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
40	rs2948305	chr8:8098577-8098578	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs183030020	chr8:8098581-8098582	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
42	rs532023904	chr8:8098593-8098594	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
43	rs188006610	chr8:8098597-8098598	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
44	rs567948134	chr8:8098620-8098621	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
45	rs530450225	chr8:8098621-8098622	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
46	rs28758298	chr8:8098636-8098637	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs190976096	chr8:8098659-8098660	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
48	rs539085221	chr8:8098663-8098664	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
49	rs559018822	chr8:8098738-8098739	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
50	rs183924300	chr8:8098747-8098748	Weak transcription Strong transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:145)

Disease	PMID	Source
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16774939	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bladder cancer	21909424	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Incontinentia Pigmenti	22033527	CNVD
Williams Syndrome	20824207	CNVD
Urothelial carcinoma	21177765	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Schizophrenia	20967226	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:1264 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:8086600-8100600	Weak transcription	Aorta	Aorta
2	chr8:8086800-8099400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr8:8086800-8100000	Weak transcription	Fetal Muscle Leg	muscle
4	chr8:8086800-8101400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:8086800-8101600	Weak transcription	Pancreas	Pancrea
6	chr8:8086800-8108400	Weak transcription	NHEK	skin
7	chr8:8087000-8100000	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr8:8087000-8101000	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr8:8087400-8100400	Weak transcription	A549	lung
10	chr8:8091200-8101200	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr8:8092000-8101200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr8:8092000-8101800	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr8:8092200-8103600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr8:8092400-8103600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr8:8093600-8101200	Weak transcription	Osteobl	bone
16	chr8:8093600-8106000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:8093800-8101400	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr8:8094000-8101000	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr8:8094000-8101600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr8:8094000-8105400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr8:8094400-8100200	Weak transcription	HepG2	liver
22	chr8:8095000-8099400	Weak transcription	Liver	Liver
23	chr8:8096200-8101200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr8:8096200-8101400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr8:8096200-8101400	Weak transcription	Placenta	Placenta
26	chr8:8096200-8108400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr8:8096400-8101600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr8:8096600-8100200	Weak transcription	K562	blood
29	chr8:8096800-8098200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr8:8096800-8102200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr8:8097000-8098400	Strong transcription	Fetal Intestine Small	intestine
32	chr8:8097000-8101200	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr8:8097000-8102000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr8:8097200-8099000	Strong transcription	Primary neutrophils fromperipheralblood	blood
35	chr8:8097200-8099800	Weak transcription	Primary B cells from peripheral blood	blood
36	chr8:8097200-8101000	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr8:8097200-8105200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
38	chr8:8097400-8099200	Weak transcription	GM12878-XiMat	blood
39	chr8:8097800-8100200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
40	chr8:8098200-8103400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr8:8098400-8101600	Weak transcription	Fetal Intestine Small	intestine
42	chr8:8099000-8099800	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr8:8099200-8100200	Enhancers	GM12878-XiMat	blood
44	chr8:8099400-8100400	Enhancers	Liver	Liver
45	chr8:8099800-8100600	Enhancers	Primary B cells from peripheral blood	blood
46	chr8:8099800-8100800	Enhancers	Primary neutrophils fromperipheralblood	blood
47	chr8:8100200-8100400	Flanking Active TSS	GM12878-XiMat	blood
48	chr8:8100200-8100600	Enhancers	K562	blood
49	chr8:8100200-8101400	Enhancers	HepG2	liver
50	chr8:8100200-8108400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links