Variant report

Variant	nsv611252
Chromosome Location	chr8:47368394-47388121
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1127 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:1127 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs151142087	chr8:47368394-47368395	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs192444852	chr8:47368398-47368399	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs369116965	chr8:47368404-47368405	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs139403627	chr8:47368423-47368424	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs540596297	chr8:47368435-47368436	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs376292508	chr8:47368439-47368440	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs560838598	chr8:47368464-47368465	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs558084943	chr8:47368517-47368518	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs571775160	chr8:47368519-47368520	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs533029233	chr8:47368520-47368521	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs200304215	chr8:47368546-47368547	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs574193859	chr8:47368547-47368548	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs543166905	chr8:47368569-47368570	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs10109390	chr8:47368570-47368571	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs76230569	chr8:47368594-47368595	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs79262176	chr8:47368595-47368596	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs556174895	chr8:47368597-47368598	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs549651314	chr8:47368598-47368599	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs74764743	chr8:47368616-47368617	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs551816823	chr8:47368629-47368630	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs78406068	chr8:47368632-47368633	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs565314398	chr8:47368654-47368655	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs527665795	chr8:47368662-47368663	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs547413311	chr8:47368673-47368674	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs567508534	chr8:47368684-47368685	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs536059262	chr8:47368699-47368700	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs185396634	chr8:47368705-47368706	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs549536506	chr8:47368717-47368718	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs569428172	chr8:47368724-47368725	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs538379817	chr8:47368739-47368740	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs141770674	chr8:47368740-47368741	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs190641140	chr8:47368744-47368745	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs147082149	chr8:47368749-47368750	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs554179297	chr8:47368761-47368762	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs571327148	chr8:47368773-47368774	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs149162961	chr8:47368779-47368780	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs543267694	chr8:47368795-47368796	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs563040277	chr8:47368822-47368823	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs181527775	chr8:47368872-47368873	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs143263004	chr8:47368881-47368882	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs569629205	chr8:47368895-47368896	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs535390201	chr8:47368965-47368966	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs79203288	chr8:47368978-47368979	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs187120702	chr8:47369012-47369013	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs547720232	chr8:47369020-47369021	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs561044974	chr8:47369021-47369022	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs529965667	chr8:47369056-47369057	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs549648909	chr8:47369070-47369071	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs555408440	chr8:47369095-47369096	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs189495771	chr8:47369096-47369097	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Lung cancer	18438408	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Medulloblastoma	20607354	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	20409316	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:47363600-47369200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr8:47368400-47368800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:47368600-47371200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:47370600-47373000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
5	chr8:47371600-47372400	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr8:47372000-47379600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr8:47372600-47380800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
8	chr8:47376800-47377000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
9	chr8:47379600-47381000	ZNF genes & repeats	Liver	Liver
10	chr8:47381600-47382200	ZNF genes & repeats	Liver	Liver
11	chr8:47382000-47394000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr8:47382400-47386000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
13	chr8:47383200-47391800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
14	chr8:47383800-47390200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
15	chr8:47384600-47393000	ZNF genes & repeats	Liver	Liver
16	chr8:47385200-47386000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
17	chr8:47387200-47387800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links