Variant report

Variant	nsv611673
Chromosome Location	chr8:87106710-87136320
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:87120934-87121263	HepG2	liver:	n/a	n/a
2	ATF1	chr8:87120932-87121222	K562	blood:	n/a	n/a
3	CEBPB	chr8:87126502-87126630	A549	lung:	n/a	chr8:87126577-87126588 chr8:87126578-87126587 chr8:87126576-87126589
4	CEBPB	chr8:87131435-87131564	HepG2	liver:	n/a	chr8:87131513-87131524
5	CEBPB	chr8:87126564-87126632	HepG2	liver:	n/a	chr8:87126577-87126588 chr8:87126578-87126587 chr8:87126576-87126589
6	CEBPB	chr8:87131270-87131664	MCF-7	breast:	n/a	chr8:87131513-87131524
7	CEBPB	chr8:87110920-87111059	A549	lung:	n/a	n/a
8	CEBPB	chr8:87107691-87107790	H1-hESC	embryonic stem cell:	n/a	n/a
9	CEBPB	chr8:87131409-87131615	A549	lung:	n/a	chr8:87131513-87131524
10	CTCF	chr8:87129683-87129720	Kidney_OC	kidney:	n/a	n/a
11	CTCF	chr8:87112300-87112450	MCF-7	breast:	n/a	n/a
12	CTCF	chr8:87107560-87107710	HBMEC	blood vessel:	n/a	n/a
13	CTCF	chr8:87112220-87112370	MCF-7	breast:	n/a	n/a
14	CTCF	chr8:87107668-87107695	Hela-S3	cervix:	n/a	n/a
15	CTCF	chr8:87107520-87107670	HMEC	breast:	n/a	n/a
16	CUX1	chr8:87121656-87121728	K562	blood:	n/a	n/a
17	E2F4	chr8:87106676-87106740	MCF10A-Er-Src	breast:	n/a	n/a
18	E2F4	chr8:87113909-87114022	MCF10A-Er-Src	breast:	n/a	n/a
19	E2F4	chr8:87108937-87109219	MCF10A-Er-Src	breast:	n/a	n/a
20	E2F4	chr8:87131412-87131442	MCF10A-Er-Src	breast:	n/a	n/a
21	E2F4	chr8:87114889-87115130	MCF10A-Er-Src	breast:	n/a	n/a
22	E2F4	chr8:87120877-87121382	MCF10A-Er-Src	breast:	n/a	n/a
23	ELF1	chr8:87120612-87121412	MCF-7	breast:	n/a	n/a
24	EP300	chr8:87120743-87121438	ECC-1	luminal epithelium:	n/a	chr8:87120964-87120973 chr8:87121102-87121111
25	EP300	chr8:87120762-87121238	MCF-7	breast:	n/a	chr8:87120964-87120973 chr8:87121102-87121111
26	FOS	chr8:87131338-87131540	MCF10A-Er-Src	breast:	n/a	n/a
27	FOS	chr8:87114829-87115173	MCF10A-Er-Src	breast:	n/a	chr8:87115032-87115041 chr8:87115005-87115016 chr8:87115002-87115013 chr8:87115004-87115012
28	FOS	chr8:87107542-87107817	MCF10A-Er-Src	breast:	n/a	n/a
29	FOS	chr8:87120912-87121305	MCF10A-Er-Src	breast:	n/a	chr8:87121102-87121110 chr8:87121102-87121109 chr8:87121100-87121111 chr8:87121102-87121110
30	FOS	chr8:87114828-87115197	HUVEC	blood vessel:	n/a	chr8:87115032-87115041 chr8:87115005-87115016 chr8:87115002-87115013 chr8:87115004-87115012
31	FOS	chr8:87107522-87107857	MCF10A-Er-Src	breast:	n/a	n/a
32	FOS	chr8:87113976-87114326	HUVEC	blood vessel:	n/a	chr8:87114162-87114173
33	FOS	chr8:87131287-87131557	MCF10A-Er-Src	breast:	n/a	n/a
34	FOS	chr8:87110875-87111139	MCF10A-Er-Src	breast:	n/a	chr8:87110990-87111001
35	FOS	chr8:87120843-87121361	MCF10A-Er-Src	breast:	n/a	chr8:87121102-87121110 chr8:87121102-87121109 chr8:87121100-87121111 chr8:87121102-87121110
36	FOS	chr8:87114040-87114318	MCF10A-Er-Src	breast:	n/a	chr8:87114162-87114173
37	FOS	chr8:87110861-87111179	MCF10A-Er-Src	breast:	n/a	chr8:87110990-87111001
38	FOS	chr8:87131302-87131561	MCF10A-Er-Src	breast:	n/a	n/a
39	FOS	chr8:87107558-87107862	MCF10A-Er-Src	breast:	n/a	n/a
40	FOS	chr8:87114016-87114312	MCF10A-Er-Src	breast:	n/a	chr8:87114162-87114173
41	FOS	chr8:87120831-87121302	MCF10A-Er-Src	breast:	n/a	chr8:87121102-87121110 chr8:87121102-87121109 chr8:87121100-87121111 chr8:87121102-87121110
42	FOS	chr8:87113989-87114355	MCF10A-Er-Src	breast:	n/a	chr8:87114162-87114173
43	FOS	chr8:87120892-87121299	MCF10A-Er-Src	breast:	n/a	chr8:87121102-87121110 chr8:87121102-87121109 chr8:87121100-87121111 chr8:87121102-87121110
44	FOS	chr8:87110848-87111153	HUVEC	blood vessel:	n/a	chr8:87110990-87111001
45	FOS	chr8:87120881-87121359	HUVEC	blood vessel:	n/a	chr8:87121102-87121110 chr8:87121102-87121109 chr8:87121100-87121111 chr8:87121102-87121110
46	FOS	chr8:87114860-87115184	MCF10A-Er-Src	breast:	n/a	chr8:87115032-87115041 chr8:87115005-87115016 chr8:87115002-87115013 chr8:87115004-87115012
47	FOS	chr8:87110823-87111186	MCF10A-Er-Src	breast:	n/a	chr8:87110990-87111001
48	FOS	chr8:87114821-87115175	MCF10A-Er-Src	breast:	n/a	chr8:87115032-87115041 chr8:87115005-87115016 chr8:87115002-87115013 chr8:87115004-87115012
49	FOS	chr8:87114874-87115140	MCF10A-Er-Src	breast:	n/a	chr8:87115032-87115041 chr8:87115005-87115016 chr8:87115002-87115013 chr8:87115004-87115012
50	FOS	chr8:87113980-87114320	MCF10A-Er-Src	breast:	n/a	chr8:87114162-87114173

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:87111155-87111205	AG04449	skin:	fetal
2	chr8:87111155-87111205	AG04449	skin:	fetal
3	chr8:87110546-87110596	AoSMC	blood vessel:	n/a
4	chr8:87110546-87110596	PFSK-1	brain:	n/a
5	chr8:87110279-87110329	GM12892	blood:	n/a
6	chr8:87110279-87110329	Jurkat	blood:	n/a
7	chr8:87111119-87111169	HRE	kidney:	n/a
8	chr8:87135788-87135838	Jurkat	blood:	n/a
9	chr8:87111155-87111205	GM06990	blood:	n/a
10	chr8:87109832-87109882	LNCaP	prostate:	n/a
11	chr8:87109832-87109882	NHBE	bronchial:	n/a
12	chr8:87110279-87110329	U87	brain:	n/a
13	chr8:87111155-87111205	LNCaP	prostate:	n/a
14	chr8:87135788-87135838	HepG2	liver:	n/a
15	chr8:87111119-87111169	HRPEpiC	eye:	n/a
16	chr8:87135788-87135838	Hela-S3	cervix:	n/a
17	chr8:87110546-87110596	HCM	heart:	n/a
18	chr8:87109832-87109882	HCPEpiC	choroid plexus:	n/a
19	chr8:87110546-87110596	Jurkat	blood:	n/a
20	chr8:87135788-87135838	SKMC	muscle:	n/a
21	chr8:87110279-87110329	NHDF-neo	bronchial:	n/a
22	chr8:87110546-87110596	GM12878	blood:	n/a
23	chr8:87111155-87111205	HRCEpiC	kidney:	n/a
24	chr8:87110279-87110329	ovcar-3	ovarian:	n/a
25	chr8:87111119-87111169	Hela-S3	cervix:	n/a
26	chr8:87109832-87109882	A549	lung:	n/a
27	chr8:87135788-87135838	HRCEpiC	kidney:	n/a
28	chr8:87111119-87111169	HEEpiC	esophagus:	n/a
29	chr8:87111155-87111205	SAEC	small airway:	n/a
30	chr8:87111119-87111169	NH-A	brain:	n/a
31	chr8:87135788-87135838	AG09319	gingival:	n/a
32	chr8:87111155-87111205	GM19239	blood:	n/a
33	chr8:87111155-87111205	HNPCEpiC	eye:	n/a
34	chr8:87109832-87109882	NT2-D1	testis:	n/a
35	chr8:87111119-87111169	ProgFib	skin:	n/a
36	chr8:87135788-87135838	NHBE	bronchial:	n/a
37	chr8:87109832-87109882	HEEpiC	esophagus:	n/a
38	chr8:87111155-87111205	GM12878	blood:	n/a
39	chr8:87111119-87111169	SK-N-SH	brain:	n/a
40	chr8:87135788-87135838	HNPCEpiC	eye:	n/a
41	chr8:87111155-87111205	RPTEC	kidney:	n/a
42	chr8:87110546-87110596	RPTEC	kidney:	n/a
43	chr8:87111119-87111169	AG10803	skin:	n/a
44	chr8:87111119-87111169	Hepatocyte	liver:	n/a
45	chr8:87111119-87111169	BJ	skin:	n/a
46	chr8:87110279-87110329	SK-N-SH_RA	brain:	n/a
47	chr8:87109832-87109882	H1-hESC	embryonic stem cell:	embryo
48	chr8:87111119-87111169	NT2-D1	testis:	n/a
49	chr8:87111155-87111205	Hela-S3	cervix:	n/a
50	chr8:87135788-87135838	AoSMC	blood vessel:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:87128518..87130863-chr8:87134464..87135985,2	MCF-7	breast:
2	chr8:87121107..87124492-chr8:87132873..87135807,3	MCF-7	breast:
3	chr8:87121147..87123014-chr8:87175449..87177682,2	MCF-7	breast:
4	chr8:87134121..87136002-chr8:87353356..87355129,2	MCF-7	breast:
5	chr8:87115292..87116980-chr8:87121911..87124216,2	MCF-7	breast:
6	chr8:87129568..87131142-chr8:87137421..87139422,2	MCF-7	breast:
7	chr8:87125042..87127578-chr8:87129260..87131341,2	MCF-7	breast:
8	chr8:87104968..87107537-chr8:87108407..87111374,2	MCF-7	breast:
9	chr8:87125042..87127578-chr8:87129260..87131341,2	MCF-7	breast:
10	chr8:87115916..87119666-chr8:87122258..87124318,3	K562	blood:
11	chr8:87120472..87122608-chr8:87135195..87138128,3	MCF-7	breast:
12	chr8:87099204..87102058-chr8:87106597..87109469,2	MCF-7	breast:
13	chr8:87121107..87124492-chr8:87132873..87135807,3	MCF-7	breast:
14	chr8:87134524..87140628-chr8:87352938..87357440,11	MCF-7	breast:
15	chr8:87127680..87129682-chr8:87132604..87134979,2	K562	blood:
16	chr8:87135891..87139399-chr8:87360674..87363160,4	MCF-7	breast:
17	chr8:87119574..87121153-chr8:87526480..87528203,2	MCF-7	breast:
18	chr8:87127680..87129682-chr8:87132604..87134979,2	K562	blood:
19	chr8:87127285..87128795-chr8:87356726..87359670,2	MCF-7	breast:
20	chr8:87133855..87135900-chr8:87367338..87370319,2	MCF-7	breast:
21	chr8:87118812..87121413-chr8:87301706..87304462,2	MCF-7	breast:
22	chr8:87115292..87116980-chr8:87121911..87124216,2	MCF-7	breast:
23	chr8:87136101..87138942-chr8:87140052..87142177,2	MCF-7	breast:
24	chr8:87120472..87122608-chr8:87135195..87138128,3	MCF-7	breast:
25	chr8:87115916..87119666-chr8:87122258..87124318,3	K562	blood:
26	chr8:87128518..87130863-chr8:87134464..87135985,2	MCF-7	breast:
27	chr8:87126601..87128348-chr8:87354563..87356070,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC7A13-2	chr8:87111194-87111312	ENSG00000253675.1

Variant related genes	Relation type
ATP6V0D2	TF binding region
ATP6V0D2	CpG island
ENSG00000254231	chromatin interactions
ENSG00000147613	chromatin interactions
ENSG00000085719	chromatin interactions
ENSG00000123124	chromatin interactions
ENSG00000176623	chromatin interactions
ENSG00000147614	chromatin interactions

Extended variants
information (count: 1191 )
Associated
traits (count: 110 )

Variant overlapped rSNPs/rCNVs (count:1191 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7846145	chr8:87106710-87106711	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs367978615	chr8:87106748-87106749	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs139769016	chr8:87106763-87106764	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs35790951	chr8:87106785-87106786	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs571367280	chr8:87106793-87106794	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs185066962	chr8:87106803-87106804	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs190618889	chr8:87106825-87106826	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs372397301	chr8:87106842-87106843	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs76838179	chr8:87106851-87106852	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs75734756	chr8:87106852-87106853	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs532717092	chr8:87106863-87106864	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs111556970	chr8:87106865-87106866	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs192904142	chr8:87106900-87106901	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs552558706	chr8:87106940-87106941	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs566316227	chr8:87106977-87106978	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs80064301	chr8:87106999-87107000	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs558296830	chr8:87107002-87107003	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs578129823	chr8:87107019-87107020	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs565758665	chr8:87107047-87107048	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs114064234	chr8:87107062-87107063	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs74534112	chr8:87107115-87107116	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs536279547	chr8:87107218-87107219	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs574190996	chr8:87107262-87107263	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs542994519	chr8:87107263-87107264	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs185109604	chr8:87107271-87107272	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs10955870	chr8:87107273-87107274	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs201444497	chr8:87107304-87107305	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs545007481	chr8:87107308-87107309	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs565070971	chr8:87107345-87107346	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs58243820	chr8:87107352-87107353	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs550255777	chr8:87107357-87107358	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs564429576	chr8:87107399-87107400	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs72359823	chr8:87107400-87107401	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs67566159	chr8:87107437-87107438	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs60154087	chr8:87107440-87107441	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs374039085	chr8:87107452-87107453	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs189641586	chr8:87107468-87107469	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs376671243	chr8:87107489-87107490	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs546547274	chr8:87107581-87107582	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs536947614	chr8:87107618-87107619	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs558388156	chr8:87107653-87107654	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs62509933	chr8:87107700-87107701	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs201430761	chr8:87107720-87107721	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs535312766	chr8:87107734-87107735	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs558212469	chr8:87107740-87107741	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs571801346	chr8:87107795-87107796	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs537601069	chr8:87107836-87107837	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs557591407	chr8:87107879-87107880	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs531914271	chr8:87107892-87107893	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs116403010	chr8:87107906-87107907	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:110)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Autism	20841430	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Prostate cancer	22341455	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Rett syndrome	21593744	CNVD

Chromatin state (count:165 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87082400-87126200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:87106200-87108000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:87106400-87110800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr8:87106800-87107000	Enhancers	Muscle Satellite Cultured Cells	--
5	chr8:87107000-87114000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:87107400-87107800	Enhancers	Brain Inferior Temporal Lobe	brain
7	chr8:87107400-87108200	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr8:87107600-87107800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr8:87107600-87108400	Enhancers	HMEC	breast
10	chr8:87107800-87108000	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr8:87107800-87110600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:87108000-87108200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr8:87108000-87108600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:87108200-87110600	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chr8:87108200-87111000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr8:87108400-87111000	Weak transcription	HMEC	breast
17	chr8:87108600-87110600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr8:87110200-87111400	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr8:87110600-87111400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr8:87110600-87111400	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr8:87110600-87111600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr8:87110800-87111200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr8:87110800-87111400	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr8:87110800-87111400	Enhancers	Stomach Mucosa	stomach
25	chr8:87110800-87111400	Enhancers	Osteobl	bone
26	chr8:87110800-87111600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr8:87111000-87111400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr8:87111000-87111400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr8:87111000-87111400	Enhancers	Gastric	stomach
30	chr8:87111000-87111400	Enhancers	HMEC	breast
31	chr8:87111000-87111400	Enhancers	NH-A	brain
32	chr8:87111200-87113800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr8:87111400-87114000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr8:87111400-87114000	Weak transcription	HMEC	breast
35	chr8:87111400-87114000	Weak transcription	NH-A	brain
36	chr8:87111400-87120200	Weak transcription	Stomach Mucosa	stomach
37	chr8:87111600-87113800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr8:87113800-87114600	Enhancers	Hela-S3	cervix
39	chr8:87113800-87115000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr8:87113800-87115000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr8:87113800-87115800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr8:87114000-87114200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr8:87114000-87114400	Enhancers	Muscle Satellite Cultured Cells	--
44	chr8:87114000-87114600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr8:87114000-87115000	Enhancers	HMEC	breast
46	chr8:87114000-87115000	Enhancers	NH-A	brain
47	chr8:87114000-87115400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr8:87114200-87114600	Enhancers	NHEK	skin
49	chr8:87114400-87115600	Weak transcription	Muscle Satellite Cultured Cells	--
50	chr8:87114600-87115000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links