Variant report

Variant	nsv611674
Chromosome Location	chr8:87156172-87315920
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:768)
CpG islands
(count:305)
Chromatin interactive
region (count:159)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:768 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:87269106-87269601	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:87269806-87269918	HepG2	liver:	n/a	n/a
3	ARID3A	chr8:87251126-87251828	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:87249730-87249762	HepG2	liver:	n/a	n/a
5	ARID3A	chr8:87249992-87250780	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:87237988-87238154	HepG2	liver:	n/a	n/a
7	ARID3A	chr8:87302190-87302818	HepG2	liver:	n/a	n/a
8	ARID3A	chr8:87179989-87180133	HepG2	liver:	n/a	n/a
9	ARID3A	chr8:87307822-87308253	HepG2	liver:	n/a	n/a
10	ARID3A	chr8:87222381-87222600	HepG2	liver:	n/a	n/a
11	ARID3A	chr8:87267265-87268652	HepG2	liver:	n/a	n/a
12	ARID3A	chr8:87313199-87313488	HepG2	liver:	n/a	n/a
13	ATF1	chr8:87274360-87274458	K562	blood:	n/a	n/a
14	ATF3	chr8:87302234-87302791	A549	lung:	n/a	n/a
15	BHLHE40	chr8:87267833-87268266	HepG2	liver:	n/a	n/a
16	BHLHE40	chr8:87250154-87250425	HepG2	liver:	n/a	n/a
17	CBX3	chr8:87292707-87292924	K562	blood:	n/a	n/a
18	CBX3	chr8:87292590-87293043	HCT-116	colon:	n/a	n/a
19	CEBPB	chr8:87178864-87179198	HepG2	liver:	n/a	chr8:87179079-87179092 chr8:87179079-87179092 chr8:87179079-87179090 chr8:87179081-87179090 chr8:87179080-87179091
20	CEBPB	chr8:87178890-87179255	HepG2	liver:	n/a	chr8:87179079-87179092 chr8:87179079-87179092 chr8:87179079-87179090 chr8:87179081-87179090 chr8:87179080-87179091
21	CEBPB	chr8:87274550-87274931	MCF-7	breast:	n/a	chr8:87274760-87274771
22	CEBPB	chr8:87282297-87282482	K562	blood:	n/a	chr8:87282437-87282448
23	CEBPB	chr8:87301792-87302754	Hela-S3	cervix:	n/a	chr8:87301893-87301904
24	CEBPB	chr8:87282299-87282618	A549	lung:	n/a	chr8:87282437-87282448
25	CEBPB	chr8:87301802-87301962	HepG2	liver:	n/a	chr8:87301893-87301904
26	CEBPB	chr8:87160207-87160406	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr8:87215453-87215760	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr8:87256043-87256255	K562	blood:	n/a	n/a
29	CEBPB	chr8:87224775-87224930	HepG2	liver:	n/a	n/a
30	CEBPB	chr8:87178834-87179334	A549	lung:	n/a	chr8:87179079-87179092 chr8:87179079-87179092 chr8:87179079-87179090 chr8:87179081-87179090 chr8:87179080-87179091
31	CEBPB	chr8:87302363-87302733	A549	lung:	n/a	n/a
32	CEBPB	chr8:87216681-87216880	HepG2	liver:	n/a	chr8:87216817-87216828
33	CEBPB	chr8:87224768-87225010	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr8:87301764-87302059	A549	lung:	n/a	chr8:87301893-87301904
35	CEBPB	chr8:87224761-87225010	IMR90	lung:	n/a	n/a
36	CEBPB	chr8:87267825-87268226	HepG2	liver:	n/a	n/a
37	CEBPB	chr8:87245109-87245394	HepG2	liver:	n/a	chr8:87245299-87245316 chr8:87245301-87245312
38	CEBPB	chr8:87269317-87269533	HepG2	liver:	n/a	n/a
39	CEBPB	chr8:87302309-87302793	A549	lung:	n/a	n/a
40	CEBPB	chr8:87160215-87160223	HepG2	liver:	n/a	n/a
41	CEBPB	chr8:87215442-87215754	A549	lung:	n/a	n/a
42	CEBPB	chr8:87178969-87179150	HepG2	liver:	n/a	chr8:87179079-87179092 chr8:87179079-87179092 chr8:87179079-87179090 chr8:87179081-87179090 chr8:87179080-87179091
43	CEBPB	chr8:87224658-87225114	MCF-7	breast:	n/a	n/a
44	CEBPB	chr8:87302376-87302751	HepG2	liver:	n/a	n/a
45	CEBPB	chr8:87215458-87215759	HepG2	liver:	n/a	n/a
46	CEBPB	chr8:87274650-87274867	IMR90	lung:	n/a	chr8:87274760-87274771
47	CEBPB	chr8:87256017-87256246	K562	blood:	n/a	n/a
48	CEBPB	chr8:87179916-87180199	HepG2	liver:	n/a	n/a
49	CEBPB	chr8:87269308-87269515	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr8:87224726-87225047	HepG2	liver:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:87243677-87243727	NB4	blood:	n/a
2	chr8:87243979-87244029	RPTEC	kidney:	n/a
3	chr8:87243979-87244029	LNCaP	prostate:	n/a
4	chr8:87226434-87226484	LNCaP	prostate:	n/a
5	chr8:87243983-87244033	NHDF-neo	bronchial:	n/a
6	chr8:87243979-87244029	SK-N-SH	brain:	n/a
7	chr8:87226434-87226484	NHBE	bronchial:	n/a
8	chr8:87243983-87244033	AG09309	skin:	n/a
9	chr8:87243983-87244033	HRE	kidney:	n/a
10	chr8:87243979-87244029	Hepatocyte	liver:	n/a
11	chr8:87242630-87242680	T-47D	breast:	n/a
12	chr8:87243677-87243727	Hepatocyte	liver:	n/a
13	chr8:87243983-87244033	AG04450	lung:	fetal
14	chr8:87243677-87243727	AG04449	skin:	fetal
15	chr8:87226434-87226484	AG10803	skin:	n/a
16	chr8:87243983-87244033	AoSMC	blood vessel:	n/a
17	chr8:87243677-87243727	IMR90	lung:	fetal
18	chr8:87243979-87244029	HepG2	liver:	n/a
19	chr8:87243979-87244029	HPAEpiC	pulmonary alveolar:	n/a
20	chr8:87243979-87244029	HNPCEpiC	eye:	n/a
21	chr8:87243677-87243727	U87	brain:	n/a
22	chr8:87243979-87244029	Caco-2	colon:	n/a
23	chr8:87242630-87242680	SK-N-SH_RA	brain:	n/a
24	chr8:87242630-87242680	HCPEpiC	choroid plexus:	n/a
25	chr8:87243979-87244029	HRCEpiC	kidney:	n/a
26	chr8:87243979-87244029	T-47D	breast:	n/a
27	chr8:87243979-87244029	SAEC	small airway:	n/a
28	chr8:87243983-87244033	IMR90	lung:	fetal
29	chr8:87243677-87243727	GM12878	blood:	n/a
30	chr8:87242630-87242680	HNPCEpiC	eye:	n/a
31	chr8:87226434-87226484	HIPEpiC	eye:	n/a
32	chr8:87243983-87244033	HPAEpiC	pulmonary alveolar:	n/a
33	chr8:87242630-87242680	NHBE	bronchial:	n/a
34	chr8:87243979-87244029	MCF-7	breast:	n/a
35	chr8:87243677-87243727	HPAEpiC	pulmonary alveolar:	n/a
36	chr8:87243979-87244029	HL-60	blood:	n/a
37	chr8:87243983-87244033	HepG2	liver:	n/a
38	chr8:87243983-87244033	BE2_C	brain:	n/a
39	chr8:87243983-87244033	HIPEpiC	eye:	n/a
40	chr8:87226434-87226484	IMR90	lung:	fetal
41	chr8:87243983-87244033	HEK293	kidney:	embryo
42	chr8:87243979-87244029	AG04449	skin:	fetal
43	chr8:87242630-87242680	HMEC	breast:	n/a
44	chr8:87226434-87226484	NH-A	brain:	n/a
45	chr8:87226434-87226484	HEEpiC	esophagus:	n/a
46	chr8:87242630-87242680	HEK293	kidney:	embryo
47	chr8:87242630-87242680	AoSMC	blood vessel:	n/a
48	chr8:87242630-87242680	HPAEpiC	pulmonary alveolar:	n/a
49	chr8:87242630-87242680	PFSK-1	brain:	n/a
50	chr8:87243979-87244029	Hela-S3	cervix:	n/a

(count:159 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr8:87194678..87197306-chr8:87210652..87213144,4	MCF-7	breast:
2	chr8:87268857..87273498-chr8:87273591..87278525,6	MCF-7	breast:
3	chr8:87240918..87243039-chr8:87246023..87247777,2	MCF-7	breast:
4	chr8:87194678..87197306-chr8:87210652..87213144,4	MCF-7	breast:
5	chr8:87180089..87182207-chr8:87303826..87306523,2	MCF-7	breast:
6	chr8:87187644..87190858-chr8:87193352..87196070,3	MCF-7	breast:
7	chr8:87271961..87274632-chr8:87289481..87292404,2	MCF-7	breast:
8	chr8:87193009..87195641-chr8:87198363..87201280,2	MCF-7	breast:
9	chr8:87234479..87236485-chr8:87301642..87304200,2	MCF-7	breast:
10	chr8:87301270..87304931-chr8:87353185..87356602,8	MCF-7	breast:
11	chr12:132380546..132381123-chr8:87287679..87288623,2	MCF-7	breast:
12	chr8:87302798..87305553-chr8:87314921..87316646,2	MCF-7	breast:
13	chr8:87185465..87188007-chr8:87211775..87213428,2	MCF-7	breast:
14	chr8:87159253..87161189-chr8:87164060..87166599,2	MCF-7	breast:
15	chr8:87215309..87218068-chr8:87366411..87367978,2	MCF-7	breast:
16	chr8:87300961..87304848-chr8:87353412..87357734,8	MCF-7	breast:
17	chr8:87159431..87162272-chr8:87167025..87170194,3	MCF-7	breast:
18	chr8:87187097..87192513-chr8:87353340..87357451,6	MCF-7	breast:
19	chr8:87306259..87308296-chr8:87311144..87313010,2	MCF-7	breast:
20	chr8:87198044..87200373-chr8:87209574..87213892,4	MCF-7	breast:
21	chr8:87154721..87156473-chr8:87354419..87356227,3	MCF-7	breast:
22	chr8:87274626..87278061-chr8:87304076..87307581,3	MCF-7	breast:
23	chr8:87149425..87151033-chr8:87215624..87217848,2	MCF-7	breast:
24	chr8:87268554..87270621-chr8:87278313..87280560,2	MCF-7	breast:
25	chr8:87212248..87212786-chr8:87354095..87354953,3	MCF-7	breast:
26	chr8:87190469..87192191-chr8:87210663..87212770,3	MCF-7	breast:
27	chr8:87244837..87247176-chr8:87353831..87356804,2	MCF-7	breast:
28	chr8:87186847..87188623-chr8:87190111..87192908,2	MCF-7	breast:
29	chr8:87163948..87165822-chr8:87168496..87170737,2	MCF-7	breast:
30	chr8:87186174..87188770-chr8:87209763..87212500,2	MCF-7	breast:
31	chr8:87232045..87233654-chr8:87330272..87332535,2	MCF-7	breast:
32	chr8:87198044..87200373-chr8:87209574..87213892,4	MCF-7	breast:
33	chr8:87210841..87213760-chr8:87426169..87428047,2	MCF-7	breast:
34	chr8:87302798..87305553-chr8:87314921..87316646,2	MCF-7	breast:
35	chr8:87225336..87228071-chr8:87228709..87231733,3	MCF-7	breast:
36	chr8:87153151..87158884-chr8:87159008..87162555,5	MCF-7	breast:
37	chr4:2464165..2464862-chr8:87228271..87228923,2	MCF-7	breast:
38	chr8:87228877..87232522-chr8:87233381..87236697,3	MCF-7	breast:
39	chr8:87212235..87212767-chr8:87269592..87270289,2	MCF-7	breast:
40	chr8:87232831..87235143-chr8:87256917..87258574,2	MCF-7	breast:
41	chr8:87265105..87267783-chr8:87353436..87357347,3	MCF-7	breast:
42	chr8:87186174..87188770-chr8:87209763..87212500,2	MCF-7	breast:
43	chr8:87272517..87276008-chr8:87285333..87287881,3	MCF-7	breast:
44	chr8:87268857..87273498-chr8:87273591..87278525,6	MCF-7	breast:
45	chr8:87153824..87155791-chr8:87158636..87161687,3	MCF-7	breast:
46	chr8:87160636..87162188-chr8:87360256..87362719,2	MCF-7	breast:
47	chr8:87212467..87215365-chr8:87302266..87303837,2	MCF-7	breast:
48	chr8:87234479..87236485-chr8:87301642..87304200,2	MCF-7	breast:
49	chr8:87159966..87161535-chr8:87210569..87213255,2	MCF-7	breast:
50	chr8:87167795..87169493-chr8:87353892..87356513,2	MCF-7	breast:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATP6V0D2-1	chr8:87208116-87208230	ENSG00000253699.1
2	lnc-SLC7A13-2	chr8:87166297-87166454	ENSG00000253675.1
3	lnc-ATP6V0D2-1	chr8:87198876-87198935	ENSG00000253699.1
4	lnc-ATP6V0D2-1	chr8:87224424-87224465	ENSG00000253699.1
5	lnc-SLC7A13-2	chr8:87165663-87165842	ENSG00000253675.1
6	lnc-ATP6V0D2-1	chr8:87212370-87212451	ENSG00000253699.1
7	lnc-ATP6V0D2-1	chr8:87192647-87192848	ENSG00000253699.1
8	lnc-SLC7A13-2	chr8:87166252-87166435	ENSG00000253675.1

No data

Variant related genes	Relation type
ENSG00000253675	TF binding region
ENSG00000253699	TF binding region
SLC7A13	TF binding region
ENSG00000253675	CpG island
ENSG00000253699	CpG island
SLC7A13	CpG island
ENSG00000270800	chromatin interactions
ENSG00000212694	chromatin interactions
ENSG00000254231	chromatin interactions
ENSG00000124614	chromatin interactions
ENSG00000112186	chromatin interactions
ENSG00000123124	chromatin interactions
ENSG00000187735	chromatin interactions
ENSG00000164893	chromatin interactions
ENSG00000253675	chromatin interactions
ENSG00000139725	chromatin interactions
ENSG00000253699	chromatin interactions

Extended variants
information (count: 5666 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:5666 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2721252	chr8:87156172-87156173	Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs554045605	chr8:87156178-87156179	Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs74686269	chr8:87156204-87156205	Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs79479795	chr8:87156236-87156237	Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs555823740	chr8:87156255-87156256	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs575771954	chr8:87156271-87156272	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs541420943	chr8:87156280-87156281	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs554893466	chr8:87156310-87156311	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs146880049	chr8:87156313-87156314	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs540535047	chr8:87156330-87156331	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs2721251	chr8:87156367-87156368	Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs185839443	chr8:87156375-87156376	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs546456069	chr8:87156377-87156378	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs140643477	chr8:87156416-87156417	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs531890271	chr8:87156427-87156428	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs548705498	chr8:87156438-87156439	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs550218506	chr8:87156441-87156442	Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs376806303	chr8:87156707-87156708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs67385547	chr8:87156714-87156715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs527702429	chr8:87156723-87156724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs547347052	chr8:87156725-87156726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs189627619	chr8:87156728-87156729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs2626340	chr8:87156731-87156732	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs145840426	chr8:87156755-87156756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs573078038	chr8:87156848-87156849	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs569516848	chr8:87156882-87156883	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs13251068	chr8:87156953-87156954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs535134659	chr8:87156980-87156981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs900637	chr8:87156992-87156993	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs571915950	chr8:87157007-87157008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs12056658	chr8:87157038-87157039	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs554156717	chr8:87157063-87157064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs138382034	chr8:87157070-87157071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs2008520	chr8:87157076-87157077	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs12056618	chr8:87157077-87157078	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs563025827	chr8:87157148-87157149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs576719307	chr8:87157181-87157182	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs76253772	chr8:87157229-87157230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs4059248	chr8:87157242-87157243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542309661	chr8:87157254-87157255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs186246641	chr8:87157274-87157275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs527669215	chr8:87157281-87157282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs141006261	chr8:87157289-87157290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs564220984	chr8:87157305-87157306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs112116729	chr8:87157307-87157308	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs138687575	chr8:87157319-87157320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs569475092	chr8:87157336-87157337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535287116	chr8:87157344-87157345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs112134087	chr8:87157345-87157346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs146997579	chr8:87157346-87157347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:116)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Autism	20841430	CNVD
Breast cancer	21364760	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Prostate cancer	22341455	CNVD
Rett syndrome	21593744	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Renal cell carcinoma	21215367	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Breast cancer	21990379	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Schizophrenia	19805367	CNVD
Chordoma	21215367	CNVD

Chromatin state (count:387 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87155600-87156400	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr8:87156000-87156400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr8:87156000-87156600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr8:87156000-87156600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:87156200-87156600	Enhancers	Brain Anterior Caudate	brain
6	chr8:87156600-87162400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr8:87158000-87160600	Enhancers	Stomach Mucosa	stomach
8	chr8:87158200-87160400	Enhancers	Pancreas	Pancrea
9	chr8:87158400-87161200	Enhancers	Fetal Intestine Large	intestine
10	chr8:87158600-87161200	Enhancers	Fetal Intestine Small	intestine
11	chr8:87158800-87159200	Enhancers	Liver	Liver
12	chr8:87158800-87159400	Enhancers	Rectal Mucosa Donor 29	rectum
13	chr8:87158800-87159400	Enhancers	Rectal Mucosa Donor 31	rectum
14	chr8:87158800-87160400	Enhancers	Gastric	stomach
15	chr8:87159000-87163000	Enhancers	Fetal Lung	lung
16	chr8:87159200-87159800	Flanking Active TSS	Liver	Liver
17	chr8:87159400-87159600	Enhancers	Lung	lung
18	chr8:87159400-87159600	Active TSS	Rectal Mucosa Donor 29	rectum
19	chr8:87159400-87159800	Active TSS	Duodenum Mucosa	Duodenum
20	chr8:87159400-87160200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
21	chr8:87159600-87159800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
22	chr8:87159600-87160200	Enhancers	Sigmoid Colon	Sigmoid Colon
23	chr8:87159600-87160600	Enhancers	HSMMtube	muscle
24	chr8:87159800-87160000	Flanking Active TSS	Duodenum Mucosa	Duodenum
25	chr8:87159800-87160000	Enhancers	Rectal Mucosa Donor 29	rectum
26	chr8:87159800-87160200	Enhancers	Liver	Liver
27	chr8:87159800-87162800	Weak transcription	Lung	lung
28	chr8:87160000-87160200	Active TSS	Rectal Mucosa Donor 29	rectum
29	chr8:87160000-87161000	Enhancers	Fetal Kidney	kidney
30	chr8:87160200-87160400	Enhancers	Rectal Mucosa Donor 29	rectum
31	chr8:87160200-87160800	Enhancers	Duodenum Smooth Muscle	Duodenum
32	chr8:87160200-87160800	Enhancers	Fetal Stomach	stomach
33	chr8:87160200-87161000	Enhancers	Rectal Mucosa Donor 31	rectum
34	chr8:87160400-87162400	Weak transcription	Gastric	stomach
35	chr8:87162400-87162800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr8:87162400-87163200	Enhancers	Gastric	stomach
37	chr8:87162800-87163000	Enhancers	Lung	lung
38	chr8:87162800-87163200	Enhancers	Breast Myoepithelial Primary Cells	Breast
39	chr8:87162800-87165600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
40	chr8:87163200-87165000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr8:87164800-87166000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr8:87165000-87166000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr8:87165000-87166000	Enhancers	NHEK	skin
44	chr8:87165000-87166200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr8:87165000-87168600	Enhancers	Breast Myoepithelial Primary Cells	Breast
46	chr8:87165400-87166000	Enhancers	HMEC	breast
47	chr8:87165600-87166000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr8:87165600-87166000	Enhancers	iPS-15b Cell Line	embryonic stem cell
49	chr8:87165800-87166200	Enhancers	H1 Cell Line	embryonic stem cell
50	chr8:87177200-87180000	Enhancers	Primary monocytes fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links