Variant report

Variant	nsv613052
Chromosome Location	chr9:1311310-1662585
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1727)
CpG islands
(count:0)
Chromatin interactive
region (count:47)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1727 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:1454262-1454586	HepG2	liver:	n/a	n/a
2	ATF2	chr9:1469886-1470491	GM12878	blood:	n/a	n/a
3	ATF2	chr9:1469879-1470564	GM12878	blood:	n/a	n/a
4	ATF2	chr9:1490307-1491149	GM12878	blood:	n/a	n/a
5	ATF2	chr9:1490362-1491115	GM12878	blood:	n/a	n/a
6	ATF2	chr9:1536421-1536930	GM12878	blood:	n/a	n/a
7	ATF2	chr9:1536424-1536957	GM12878	blood:	n/a	n/a
8	BATF	chr9:1536433-1537132	GM12878	blood:	n/a	chr9:1536673-1536683
9	BATF	chr9:1311457-1311704	GM12878	blood:	n/a	n/a
10	BATF	chr9:1490384-1491050	GM12878	blood:	n/a	n/a
11	BATF	chr9:1522204-1522433	GM12878	blood:	n/a	n/a
12	BATF	chr9:1505545-1505846	GM12878	blood:	n/a	n/a
13	BATF	chr9:1490300-1491164	GM12878	blood:	n/a	n/a
14	BATF	chr9:1514759-1515190	GM12878	blood:	n/a	chr9:1514963-1514974
15	BATF	chr9:1522199-1522450	GM12878	blood:	n/a	n/a
16	BATF	chr9:1536479-1536843	GM12878	blood:	n/a	chr9:1536673-1536683
17	BATF	chr9:1535619-1535903	GM12878	blood:	n/a	n/a
18	BATF	chr9:1470009-1470366	GM12878	blood:	n/a	chr9:1470172-1470183 chr9:1470265-1470278
19	BATF	chr9:1468627-1468906	GM12878	blood:	n/a	n/a
20	BCL11A	chr9:1554412-1554724	GM12878	blood:	n/a	n/a
21	BCL11A	chr9:1490371-1491127	GM12878	blood:	n/a	n/a
22	BCL11A	chr9:1536449-1536835	GM12878	blood:	n/a	chr9:1536675-1536684
23	BCL11A	chr9:1522572-1522804	GM12878	blood:	n/a	n/a
24	BCL11A	chr9:1490707-1491032	GM12878	blood:	n/a	n/a
25	BCL11A	chr9:1522157-1522444	GM12878	blood:	n/a	n/a
26	BCL11A	chr9:1536584-1536781	GM12878	blood:	n/a	chr9:1536675-1536684
27	BCL3	chr9:1469934-1470495	GM12878	blood:	n/a	n/a
28	BCL3	chr9:1458432-1458804	GM12878	blood:	n/a	chr9:1458740-1458749 chr9:1458739-1458748
29	BCL3	chr9:1536446-1536852	GM12878	blood:	n/a	chr9:1536675-1536684
30	BCL3	chr9:1458553-1458815	GM12878	blood:	n/a	chr9:1458740-1458749 chr9:1458739-1458748
31	BCLAF1	chr9:1490297-1491172	GM12878	blood:	n/a	n/a
32	BCLAF1	chr9:1490418-1491093	GM12878	blood:	n/a	n/a
33	BCLAF1	chr9:1604933-1605323	GM12878	blood:	n/a	n/a
34	BHLHE40	chr9:1425741-1425826	GM12878	blood:	n/a	n/a
35	BHLHE40	chr9:1329191-1329209	GM12878	blood:	n/a	n/a
36	BHLHE40	chr9:1469908-1470375	GM12878	blood:	n/a	n/a
37	BHLHE40	chr9:1490542-1491092	GM12878	blood:	n/a	n/a
38	BHLHE40	chr9:1629945-1630149	HepG2	liver:	n/a	n/a
39	BHLHE40	chr9:1460181-1460500	HepG2	liver:	n/a	n/a
40	BHLHE40	chr9:1522159-1522989	GM12878	blood:	n/a	n/a
41	BHLHE40	chr9:1536541-1536940	GM12878	blood:	n/a	n/a
42	BRCA1	chr9:1490830-1490954	GM12878	blood:	n/a	n/a
43	BRCA1	chr9:1604021-1604050	GM12878	blood:	n/a	n/a
44	CEBPB	chr9:1321798-1322094	A549	lung:	n/a	chr9:1321967-1321978 chr9:1321966-1321979 chr9:1321966-1321979 chr9:1321966-1321977 chr9:1321966-1321979 chr9:1322004-1322017
45	CEBPB	chr9:1320828-1321012	A549	lung:	n/a	chr9:1320878-1320889 chr9:1320878-1320891 chr9:1320879-1320890
46	CEBPB	chr9:1383860-1384144	A549	lung:	n/a	chr9:1384079-1384090 chr9:1383940-1383953
47	CEBPB	chr9:1521608-1521865	H1-hESC	embryonic stem cell:	n/a	chr9:1521743-1521752 chr9:1521743-1521752 chr9:1521742-1521753 chr9:1521743-1521752 chr9:1521743-1521752
48	CEBPB	chr9:1320743-1320979	HepG2	liver:	n/a	chr9:1320878-1320889 chr9:1320878-1320891 chr9:1320879-1320890
49	CEBPB	chr9:1483706-1483968	HepG2	liver:	n/a	chr9:1483880-1483891
50	CEBPB	chr9:1612909-1613233	IMR90	lung:	n/a	chr9:1613075-1613086

No data

(count:47 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:1459777..1461278-chr9:1604683..1605512,7	MCF-7	breast:
2	chr9:1444036..1446024-chr9:1452969..1455867,2	MCF-7	breast:
3	chr9:1376504..1378788-chr9:1379688..1382512,2	MCF-7	breast:
4	chr9:1474110..1476318-chr9:1485269..1488138,2	MCF-7	breast:
5	chr9:1049884..1050964-chr9:1336243..1337456,4	MCF-7	breast:
6	chr9:1459862..1460804-chr9:1527712..1529112,4	MCF-7	breast:
7	chr9:1605194..1607051-chr9:1607421..1609783,2	MCF-7	breast:
8	chr9:1101941..1102561-chr9:1429407..1430134,2	MCF-7	breast:
9	chr9:1463195..1465097-chr9:1468058..1470697,2	MCF-7	breast:
10	chr9:1017795..1018400-chr9:1429068..1429992,2	MCF-7	breast:
11	chr9:1453549..1456481-chr9:1457480..1459717,2	K562	blood:
12	chr9:1329896..1332390-chr9:1334019..1336447,2	MCF-7	breast:
13	chr9:1459863..1460905-chr9:1619604..1620748,6	MCF-7	breast:
14	chr9:1329896..1332390-chr9:1334019..1336447,2	MCF-7	breast:
15	chr9:1492000..1494748-chr9:1498884..1501267,2	MCF-7	breast:
16	chr9:1604812..1606126-chr9:1619456..1620358,3	MCF-7	breast:
17	chr9:1459862..1460804-chr9:1527712..1529112,4	MCF-7	breast:
18	chr9:1474110..1476318-chr9:1485269..1488138,2	MCF-7	breast:
19	chr9:1100954..1101519-chr9:1619985..1620571,2	MCF-7	breast:
20	chr9:1605194..1607051-chr9:1607421..1609783,2	MCF-7	breast:
21	chr9:1454281..1457237-chr9:1457484..1459959,2	MCF-7	breast:
22	chr9:1604812..1606126-chr9:1619456..1620358,3	MCF-7	breast:
23	chr9:1414222..1417184-chr9:1419869..1422079,2	K562	blood:
24	chr9:1459863..1460905-chr9:1619604..1620748,6	MCF-7	breast:
25	chr9:1492000..1494748-chr9:1498884..1501267,2	MCF-7	breast:
26	chr9:1017910..1018696-chr9:1429132..1429802,2	MCF-7	breast:
27	chr9:1459863..1460538-chr9:1837555..1838175,2	MCF-7	breast:
28	chr9:1376504..1378788-chr9:1379688..1382512,2	MCF-7	breast:
29	chr9:1459777..1461278-chr9:1604683..1605512,7	MCF-7	breast:
30	chr9:1100633..1101579-chr9:1428962..1429946,8	MCF-7	breast:
31	chr9:1459729..1460626-chr9:1605062..1605562,2	MCF-7	breast:
32	chr9:1100638..1101499-chr9:1337048..1337780,3	MCF-7	breast:
33	chr9:1454281..1457237-chr9:1457484..1459959,2	MCF-7	breast:
34	chr9:1017828..1018465-chr9:1337011..1337699,2	MCF-7	breast:
35	chr9:1414222..1417184-chr9:1419869..1422079,2	K562	blood:
36	chr9:1315772..1318545-chr9:1320375..1322632,2	K562	blood:
37	chr9:1100620..1101481-chr9:1337009..1337893,4	MCF-7	breast:
38	chr9:1444036..1446024-chr9:1452969..1455867,2	MCF-7	breast:
39	chr9:1049884..1051008-chr9:1336243..1337579,9	MCF-7	breast:
40	chr9:1463195..1465097-chr9:1468058..1470697,2	MCF-7	breast:
41	chr9:1433839..1434724-chr9:1619824..1620539,2	MCF-7	breast:
42	chr9:1017972..1018656-chr9:1527877..1528623,2	MCF-7	breast:
43	chr9:1433839..1434724-chr9:1619824..1620539,2	MCF-7	breast:
44	chr9:1459729..1460626-chr9:1605062..1605562,2	MCF-7	breast:
45	chr9:1100898..1101474-chr9:1619645..1620185,2	MCF-7	breast:
46	chr9:1315772..1318545-chr9:1320375..1322632,2	K562	blood:
47	chr9:1453549..1456481-chr9:1457480..1459717,2	K562	blood:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DMRT2-2	chr9:1312841-1312899	XLOC_007263
2	lnc-DMRT2-2	chr9:1321456-1321494	NONHSAT129967
3	lnc-DMRT2-2	chr9:1327074-1327173	XLOC_007263
4	lnc-DMRT2-2	chr9:1327074-1327173	XLOC_007263
5	lnc-DMRT2-2	chr9:1328425-1328435	XLOC_007263
6	lnc-DMRT2-5	chr9:1328664-1328987	NONHSAT129974
7	lnc-DMRT2-2	chr9:1312841-1312897	XLOC_007263
8	lnc-DMRT2-2	chr9:1312840-1312899	NONHSAT129967
9	lnc-DMRT2-6	chr9:1354235-1354272	NONHSAT129976
10	lnc-SMARCA2-2	chr9:1633518-1633545	XLOC_007264
11	lnc-DMRT2-2	chr9:1327073-1327173	NONHSAT129967
12	lnc-DMRT2-4	chr9:1318425-1318584	l_3725_chr9:1288276-1302899_breast
13	lnc-DMRT2-2	chr9:1328425-1328584	XLOC_007263
14	lnc-DMRT2-2	chr9:1321457-1321494	XLOC_007263
15	lnc-DMRT2-4	chr9:1317074-1317173	l_3725_chr9:1288276-1302899_breast
16	lnc-DMRT2-2	chr9:1328424-1328584	NONHSAT129967
17	lnc-DMRT2-6	chr9:1368147-1368400	NONHSAT129976
18	lnc-DMRT2-2	chr9:1321457-1321494	XLOC_007263

No data

Variant related genes	Relation type
ENSG00000233575	TF binding region
RNA5SP279	TF binding region
ENSG00000173253	chromatin interactions
AP3D1	miRNA target sites

Extended variants
information (count: 13974 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:13974 , 50 per page) page: 1 2 3 4 5 6 7 ... 280

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs16927344	chr9:1311310-1311311	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs141687067	chr9:1311330-1311331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs559094746	chr9:1311339-1311340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs573005357	chr9:1311408-1311409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs570032414	chr9:1311413-1311414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541910306	chr9:1311435-1311436	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs75587525	chr9:1311440-1311441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs188432580	chr9:1311441-1311442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs78473237	chr9:1311470-1311471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs551024660	chr9:1311484-1311485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs547780414	chr9:1311505-1311506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs564814367	chr9:1311514-1311515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs549946994	chr9:1311518-1311519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs145336194	chr9:1311519-1311520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs138440989	chr9:1311531-1311532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs142934439	chr9:1311532-1311533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs10960884	chr9:1311552-1311553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs548305842	chr9:1311594-1311595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs180941580	chr9:1311605-1311606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs537037548	chr9:1311628-1311629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556649294	chr9:1311637-1311638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs541679790	chr9:1311644-1311645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs114978096	chr9:1311662-1311663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs140003355	chr9:1311688-1311689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs149419966	chr9:1311698-1311699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs572697053	chr9:1311706-1311707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs541947228	chr9:1311731-1311732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs562196365	chr9:1311732-1311733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs575612667	chr9:1311819-1311820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs556392333	chr9:1311871-1311872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs36050867	chr9:1311877-1311878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs144681098	chr9:1311884-1311885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs533675110	chr9:1311892-1311893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112432055	chr9:1311897-1311898	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs115779712	chr9:1311900-1311901	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529491445	chr9:1311931-1311932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185018427	chr9:1312002-1312003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs145493591	chr9:1312029-1312030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs536719677	chr9:1312033-1312034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs550554476	chr9:1312050-1312051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs570314165	chr9:1312090-1312091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs141773609	chr9:1312146-1312147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs539393725	chr9:1312147-1312148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs398113145	chr9:1312158-1312159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs552824309	chr9:1312240-1312241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs527453442	chr9:1312274-1312275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs16927352	chr9:1312284-1312285	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs4440679	chr9:1312312-1312313	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs570850022	chr9:1312319-1312320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs374504834	chr9:1312333-1312334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Esophageal cancer	21851588	CNVD
Breast cancer	22522925	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Renal cell carcinoma	21215367	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:285 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:1302800-1318400	Weak transcription	Adipose Nuclei	Adipose
2	chr9:1318200-1321600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr9:1318400-1321600	Enhancers	Adipose Nuclei	Adipose
4	chr9:1318600-1321200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:1318600-1321400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr9:1318800-1321400	Enhancers	Fetal Stomach	stomach
7	chr9:1318800-1321600	Enhancers	Fetal Muscle Leg	muscle
8	chr9:1320000-1321600	Enhancers	Fetal Lung	lung
9	chr9:1320600-1320800	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
10	chr9:1321000-1321400	Enhancers	Colon Smooth Muscle	Colon
11	chr9:1321000-1321400	Enhancers	Fetal Muscle Trunk	muscle
12	chr9:1321200-1321800	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr9:1321600-1332200	Weak transcription	Adipose Nuclei	Adipose
14	chr9:1323400-1323600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr9:1325600-1326000	Enhancers	Fetal Brain Male	brain
16	chr9:1326000-1331600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr9:1327200-1328800	Enhancers	Fetal Lung	lung
18	chr9:1327400-1327600	Enhancers	Fetal Stomach	stomach
19	chr9:1328400-1328800	Enhancers	Gastric	stomach
20	chr9:1328800-1340400	Weak transcription	Fetal Lung	lung
21	chr9:1331000-1331800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr9:1331400-1332800	Enhancers	Fetal Stomach	stomach
23	chr9:1331600-1332400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr9:1332000-1332600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr9:1332200-1332600	Enhancers	Adipose Nuclei	Adipose
26	chr9:1332400-1332800	Enhancers	Colon Smooth Muscle	Colon
27	chr9:1332600-1340200	Weak transcription	Adipose Nuclei	Adipose
28	chr9:1337200-1337600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr9:1337400-1337800	Enhancers	Liver	Liver
30	chr9:1339000-1339400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr9:1340000-1341000	Enhancers	Fetal Stomach	stomach
32	chr9:1340200-1340800	Enhancers	Adipose Nuclei	Adipose
33	chr9:1340400-1340600	Enhancers	Fetal Lung	lung
34	chr9:1349200-1349800	Enhancers	Adipose Nuclei	Adipose
35	chr9:1349800-1354600	Weak transcription	Adipose Nuclei	Adipose
36	chr9:1354200-1354600	Enhancers	Muscle Satellite Cultured Cells	--
37	chr9:1354400-1356800	Enhancers	HSMMtube	muscle
38	chr9:1354600-1355200	Enhancers	HSMM	muscle
39	chr9:1354600-1356000	Enhancers	Adipose Nuclei	Adipose
40	chr9:1354800-1356000	Enhancers	Fetal Muscle Leg	muscle
41	chr9:1356000-1362800	Weak transcription	Adipose Nuclei	Adipose
42	chr9:1362400-1363000	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr9:1362800-1363200	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr9:1362800-1363200	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr9:1362800-1363200	Enhancers	Adipose Nuclei	Adipose
46	chr9:1364400-1367000	Enhancers	Primary T killer memory cells from peripheral blood	blood
47	chr9:1365000-1367400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
48	chr9:1365600-1366400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
49	chr9:1366600-1367400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
50	chr9:1373400-1373600	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links