Variant report

Variant	nsv614549
Chromosome Location	chr9:71506459-71659280
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2459)
CpG islands
(count:977)
Chromatin interactive
region (count:102)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2459 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:71576402-71576900	K562	blood:	n/a	n/a
2	ARID3A	chr9:71631852-71631872	K562	blood:	n/a	n/a
3	ARID3A	chr9:71642563-71642873	K562	blood:	n/a	n/a
4	ARID3A	chr9:71634748-71635103	K562	blood:	n/a	n/a
5	ARID3A	chr9:71584464-71585376	K562	blood:	n/a	n/a
6	ARID3A	chr9:71598080-71598400	K562	blood:	n/a	n/a
7	ARID3A	chr9:71614594-71614886	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:71542080-71542315	K562	blood:	n/a	n/a
9	ARID3A	chr9:71650444-71651128	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:71651502-71651839	K562	blood:	n/a	n/a
11	ARID3A	chr9:71584469-71584970	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:71650526-71650743	K562	blood:	n/a	n/a
13	ARID3A	chr9:71635426-71635919	K562	blood:	n/a	n/a
14	ATF1	chr9:71642591-71642873	K562	blood:	n/a	n/a
15	ATF1	chr9:71584518-71584727	K562	blood:	n/a	n/a
16	ATF1	chr9:71576511-71576777	K562	blood:	n/a	n/a
17	ATF1	chr9:71635543-71635967	K562	blood:	n/a	n/a
18	ATF1	chr9:71598096-71598406	K562	blood:	n/a	n/a
19	ATF1	chr9:71542195-71542403	K562	blood:	n/a	n/a
20	ATF1	chr9:71613777-71614153	K562	blood:	n/a	n/a
21	ATF1	chr9:71590616-71590989	K562	blood:	n/a	n/a
22	ATF1	chr9:71634756-71635094	K562	blood:	n/a	n/a
23	ATF2	chr9:71566854-71567581	GM12878	blood:	n/a	n/a
24	ATF2	chr9:71590432-71591070	GM12878	blood:	n/a	n/a
25	ATF2	chr9:71590514-71590994	GM12878	blood:	n/a	n/a
26	ATF2	chr9:71532395-71533134	GM12878	blood:	n/a	n/a
27	ATF2	chr9:71589185-71589864	GM12878	blood:	n/a	n/a
28	ATF2	chr9:71561786-71562440	H1-hESC	embryonic stem cell:	n/a	n/a
29	ATF2	chr9:71581505-71582024	GM12878	blood:	n/a	n/a
30	ATF2	chr9:71581453-71582017	GM12878	blood:	n/a	n/a
31	ATF2	chr9:71596689-71597229	GM12878	blood:	n/a	n/a
32	ATF2	chr9:71589241-71589855	GM12878	blood:	n/a	n/a
33	ATF2	chr9:71548216-71549106	GM12878	blood:	n/a	n/a
34	ATF2	chr9:71562782-71563303	GM12878	blood:	n/a	n/a
35	ATF2	chr9:71532495-71533061	GM12878	blood:	n/a	n/a
36	ATF2	chr9:71548349-71548993	GM12878	blood:	n/a	n/a
37	ATF2	chr9:71650325-71650801	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF2	chr9:71650422-71650822	H1-hESC	embryonic stem cell:	n/a	n/a
39	ATF2	chr9:71510851-71511392	GM12878	blood:	n/a	n/a
40	ATF3	chr9:71650292-71651027	A549	lung:	n/a	n/a
41	BACH1	chr9:71650535-71650996	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr9:71565650-71565999	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr9:71634639-71634975	K562	blood:	n/a	n/a
44	BATF	chr9:71589267-71589756	GM12878	blood:	n/a	n/a
45	BATF	chr9:71562819-71563155	GM12878	blood:	n/a	chr9:71563078-71563091
46	BATF	chr9:71532570-71532996	GM12878	blood:	n/a	n/a
47	BATF	chr9:71548377-71548631	GM12878	blood:	n/a	n/a
48	BATF	chr9:71567800-71567984	GM12878	blood:	n/a	n/a
49	BATF	chr9:71567183-71567487	GM12878	blood:	n/a	n/a
50	BATF	chr9:71596762-71597136	GM12878	blood:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:71651175-71651225	SAEC	small airway:	n/a
2	chr9:71651175-71651225	SAEC	small airway:	n/a
3	chr9:71628906-71628956	SK-N-SH	brain:	n/a
4	chr9:71627667-71627717	AG09309	skin:	n/a
5	chr9:71654823-71654873	ovcar-3	ovarian:	n/a
6	chr9:71650237-71650287	BE2_C	brain:	n/a
7	chr9:71652532-71652582	HRCEpiC	kidney:	n/a
8	chr9:71651175-71651225	NB4	blood:	n/a
9	chr9:71627524-71627574	SK-N-MC	brain:	n/a
10	chr9:71649195-71649245	GM12892	blood:	n/a
11	chr9:71650237-71650287	GM12878	blood:	n/a
12	chr9:71589563-71589613	PANC-1	pancreas:	n/a
13	chr9:71651331-71651381	AG09309	skin:	n/a
14	chr9:71651331-71651381	HRE	kidney:	n/a
15	chr9:71650237-71650287	A549	lung:	n/a
16	chr9:71649195-71649245	NT2-D1	testis:	n/a
17	chr9:71651175-71651225	GM12878	blood:	n/a
18	chr9:71654823-71654873	Caco-2	colon:	n/a
19	chr9:71627524-71627574	AoSMC	blood vessel:	n/a
20	chr9:71649195-71649245	SAEC	small airway:	n/a
21	chr9:71650237-71650287	ProgFib	skin:	n/a
22	chr9:71650719-71650769	U87	brain:	n/a
23	chr9:71650237-71650287	AG04450	lung:	fetal
24	chr9:71650331-71650381	HEEpiC	esophagus:	n/a
25	chr9:71589563-71589613	SKMC	muscle:	n/a
26	chr9:71651331-71651381	BE2_C	brain:	n/a
27	chr9:71629130-71629180	AG09309	skin:	n/a
28	chr9:71627524-71627574	NB4	blood:	n/a
29	chr9:71589563-71589613	AG04450	lung:	fetal
30	chr9:71628906-71628956	ProgFib	skin:	n/a
31	chr9:71652532-71652582	Hela-S3	cervix:	n/a
32	chr9:71651331-71651381	SK-N-SH_RA	brain:	n/a
33	chr9:71650719-71650769	GM06990	blood:	n/a
34	chr9:71628906-71628956	A549	lung:	n/a
35	chr9:71650237-71650287	AG09319	gingival:	n/a
36	chr9:71631514-71631564	HUVEC	blood vessel:	n/a
37	chr9:71623401-71623451	HMEC	breast:	n/a
38	chr9:71652532-71652582	ECC-1	luminal epithelium:	n/a
39	chr9:71627524-71627574	HEEpiC	esophagus:	n/a
40	chr9:71627524-71627574	AG10803	skin:	n/a
41	chr9:71654823-71654873	AoSMC	blood vessel:	n/a
42	chr9:71650237-71650287	H1-hESC	embryonic stem cell:	embryo
43	chr9:71650237-71650287	HCM	heart:	n/a
44	chr9:71651175-71651225	GM19239	blood:	n/a
45	chr9:71652532-71652582	NHDF-neo	bronchial:	n/a
46	chr9:71629130-71629180	HRCEpiC	kidney:	n/a
47	chr9:71627524-71627574	HRPEpiC	eye:	n/a
48	chr9:71650719-71650769	GM12892	blood:	n/a
49	chr9:71589563-71589613	LNCaP	prostate:	n/a
50	chr9:71623401-71623451	RPTEC	kidney:	n/a

(count:102 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:71459672..71460600-chr9:71642433..71642935,2	K562	blood:
2	chr9:71598980..71601285-chr9:71602200..71604374,2	K562	blood:
3	chr9:71199034..71199992-chr9:71614240..71615302,11	MCF-7	breast:
4	chr9:71644052..71646200-chr9:71649443..71653055,3	MCF-7	breast:
5	chr9:71647332..71649670-chr9:71650617..71653266,2	K562	blood:
6	chr9:71199122..71199719-chr9:71614348..71615097,4	MCF-7	breast:
7	chr9:71506243..71507747-chr9:71513717..71515425,2	MCF-7	breast:
8	chr9:71590575..71592087-chr9:71593583..71595166,2	K562	blood:
9	chr9:71642108..71644566-chr9:71646491..71648725,2	K562	blood:
10	chr9:71634014..71636921-chr9:71638059..71641027,2	K562	blood:
11	chr9:71589348..71591998-chr9:71596121..71599178,3	K562	blood:
12	chr9:71642108..71644566-chr9:71646491..71648725,2	K562	blood:
13	chr9:71199440..71199949-chr9:71642261..71643160,3	MCF-7	breast:
14	chr9:71545273..71547947-chr9:71556049..71558568,2	MCF-7	breast:
15	chr9:71576569..71578561-chr9:71582492..71584226,2	MCF-7	breast:
16	chr9:71600704..71602578-chr9:71603137..71605557,2	K562	blood:
17	chr9:71650420..71652084-chr9:71654261..71655791,2	MCF-7	breast:
18	chr9:71590575..71592087-chr9:71593583..71595166,2	K562	blood:
19	chr9:71627843..71630592-chr9:71632071..71633725,3	K562	blood:
20	chr9:71601422..71604412-chr9:71607352..71608900,2	MCF-7	breast:
21	chr9:71614613..71617089-chr9:71618925..71621633,2	K562	blood:
22	chr9:71576569..71578561-chr9:71582492..71584226,2	MCF-7	breast:
23	chr9:71513862..71516503-chr9:71520061..71522924,2	MCF-7	breast:
24	chr9:71199122..71199964-chr9:71614246..71615122,3	K562	blood:
25	chr9:71628740..71631389-chr9:71634679..71636239,2	K562	blood:
26	chr9:71634014..71636921-chr9:71638059..71641027,2	K562	blood:
27	chr9:71573438..71576022-chr9:71576543..71579524,3	K562	blood:
28	chr9:71568407..71571024-chr9:71572381..71575201,2	K562	blood:
29	chr9:71577956..71581283-chr9:71582183..71585440,6	K562	blood:
30	chr9:71393142..71395397-chr9:71613352..71615098,2	K562	blood:
31	chr9:71658862..71661009-chr9:71818957..71821038,2	K562	blood:
32	chr9:71594449..71596709-chr9:71598735..71600800,2	K562	blood:
33	chr9:71598980..71601285-chr9:71602200..71604374,2	K562	blood:
34	chr9:71506243..71507747-chr9:71513717..71515425,2	MCF-7	breast:
35	chr9:71319203..71320145-chr9:71614622..71615180,2	MCF-7	breast:
36	chr9:71634014..71636230-chr9:71638337..71641027,2	K562	blood:
37	chr9:71573438..71576022-chr9:71576543..71579524,3	K562	blood:
38	chr9:71577984..71579536-chr9:71582505..71585285,2	K562	blood:
39	chr9:71612099..71614210-chr9:71616099..71618792,2	MCF-7	breast:
40	chr9:71568914..71571612-chr9:71576098..71578241,2	K562	blood:
41	chr9:71459669..71460505-chr9:71614463..71615113,2	MCF-7	breast:
42	chr9:71612570..71616113-chr9:71618356..71621633,3	K562	blood:
43	chr9:71639276..71640998-chr9:71649555..71652246,2	MCF-7	breast:
44	chr9:71651712..71654573-chr9:71656499..71659593,3	K562	blood:
45	chr9:71614377..71616166-chr9:71649558..71651998,2	MCF-7	breast:
46	chr9:71637586..71639711-chr9:71650641..71653127,2	K562	blood:
47	chr9:71653020..71654541-chr9:71659472..71661333,2	K562	blood:
48	chr9:71646520..71648758-chr9:71649618..71651156,2	MCF-7	breast:
49	chr9:71392487..71395427-chr9:71649569..71651600,2	K562	blood:
50	chr9:71649121..71652086-chr9:71654303..71656330,3	K562	blood:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRKACG-1	chr9:71590580-71590757	ENSG00000249652
2	lnc-PRKACG-4	chr9:71624143-71625000	ucscGeneNc_uc004ahk_2
3	lnc-PRKACG-1	chr9:71568004-71569861	ENSG00000249652
4	lnc-PRKACG-1	chr9:71570856-71572127	NONHSAT131759
5	lnc-PRKACG-1	chr9:71571942-71572127	ENSG00000249652
6	lnc-PRKACG-5	chr9:71563250-71563521	expReg_chr9_3063_-
7	lnc-PRKACG-1	chr9:71590580-71590735	NONHSAT131759
8	lnc-PRKACG-4	chr9:71625289-71625403	ucscGeneNc_uc004ahk_2

No data

Variant related genes	Relation type
PRKACG	TF binding region
FXN	TF binding region
RNU6-820P	TF binding region
PRKACG	CpG island
FXN	CpG island
RNU6-820P	CpG island
ENSG00000165059	chromatin interactions
ENSG00000119139	chromatin interactions
ENSG00000187866	chromatin interactions
ENSG00000165060	chromatin interactions
SMAD7	miRNA target sites
NFIB	miRNA target sites
TRIP12	miRNA target sites

Extended variants
information (count: 5548 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:5548 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4237270	chr9:71506459-71506460	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs553419859	chr9:71506481-71506482	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs566126618	chr9:71506532-71506533	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs140924779	chr9:71506586-71506587	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs536152718	chr9:71506632-71506633	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs78767459	chr9:71506651-71506652	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs528981944	chr9:71506653-71506654	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs144782796	chr9:71506661-71506662	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs545575624	chr9:71506674-71506675	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs557457429	chr9:71506682-71506683	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs572486611	chr9:71506724-71506725	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs555280519	chr9:71506727-71506728	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs191428482	chr9:71506743-71506744	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs376034410	chr9:71506748-71506749	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs561367743	chr9:71506768-71506769	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs11144162	chr9:71506809-71506810	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs544503121	chr9:71506826-71506827	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs11144163	chr9:71506846-71506847	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs538836043	chr9:71506861-71506862	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs533182770	chr9:71506915-71506916	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs552375663	chr9:71506928-71506929	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs183171559	chr9:71506968-71506969	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs112265284	chr9:71506985-71506986	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs528619194	chr9:71506995-71506996	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs537998979	chr9:71507037-71507038	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs111436351	chr9:71507160-71507161	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs568476413	chr9:71507204-71507205	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs12338533	chr9:71507239-71507240	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs557684888	chr9:71507268-71507269	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs569328471	chr9:71507270-71507271	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs571559464	chr9:71507277-71507278	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs541511858	chr9:71507421-71507422	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs540057753	chr9:71507632-71507633	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs189246678	chr9:71507644-71507645	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs572572562	chr9:71507647-71507648	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs139607660	chr9:71507672-71507673	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs7048262	chr9:71507683-71507684	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs573621058	chr9:71507769-71507770	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs544157430	chr9:71507784-71507785	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542856717	chr9:71507846-71507847	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs372705611	chr9:71507847-71507848	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs554238168	chr9:71507854-71507855	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs149898792	chr9:71507855-71507856	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs536761156	chr9:71507901-71507902	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs545196203	chr9:71507915-71507916	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560394777	chr9:71507921-71507922	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs7048566	chr9:71507938-71507939	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs562034597	chr9:71507972-71507973	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs547158723	chr9:71507994-71507995	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs201081679	chr9:71507998-71507999	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	17899364	CNVD
Mantle cell lymphoma	19029149	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:2769 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:71459000-71519200	Weak transcription	Colonic Mucosa	Colon
2	chr9:71460800-71517000	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr9:71487400-71510400	Weak transcription	Gastric	stomach
4	chr9:71491800-71509200	Weak transcription	Fetal Heart	heart
5	chr9:71492400-71509400	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr9:71492400-71515000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr9:71493400-71509200	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr9:71495800-71510800	Weak transcription	Aorta	Aorta
9	chr9:71496600-71515200	Weak transcription	HepG2	liver
10	chr9:71496800-71509200	Weak transcription	Duodenum Mucosa	Duodenum
11	chr9:71496800-71509200	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr9:71498400-71510000	Weak transcription	Left Ventricle	heart
13	chr9:71500200-71512000	Weak transcription	Placenta	Placenta
14	chr9:71502000-71510400	Weak transcription	Right Ventricle	heart
15	chr9:71502200-71509400	Weak transcription	GM12878-XiMat	blood
16	chr9:71502600-71516600	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr9:71502800-71509600	Weak transcription	Primary hematopoietic stem cells	blood
18	chr9:71503400-71509400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr9:71503600-71509000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr9:71503800-71508800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr9:71503800-71508800	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr9:71503800-71508800	Weak transcription	Primary T helper cells fromperipheralblood	blood
23	chr9:71504200-71507200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr9:71504200-71509400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr9:71504400-71508800	Weak transcription	Primary T cells from cord blood	blood
26	chr9:71505400-71509200	Weak transcription	Primary B cells from cord blood	blood
27	chr9:71505400-71509800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr9:71505400-71509800	Weak transcription	Primary B cells from peripheral blood	blood
29	chr9:71505400-71512000	Weak transcription	Primary neutrophils fromperipheralblood	blood
30	chr9:71506200-71511400	Weak transcription	Fetal Intestine Small	intestine
31	chr9:71506400-71510400	Weak transcription	Fetal Intestine Large	intestine
32	chr9:71507200-71509400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr9:71507800-71509200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr9:71507800-71509600	Weak transcription	Primary T cells fromperipheralblood	blood
35	chr9:71508600-71509400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
36	chr9:71508800-71509000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr9:71508800-71509000	Enhancers	Brain Substantia Nigra	brain
38	chr9:71508800-71509200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
39	chr9:71508800-71509200	Enhancers	Primary T helper cells fromperipheralblood	blood
40	chr9:71508800-71509400	Enhancers	Primary T cells from cord blood	blood
41	chr9:71508800-71509400	Enhancers	Primary T helper cells PMA-I stimulated	--
42	chr9:71508800-71509400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr9:71508800-71512600	Enhancers	Primary T killer memory cells from peripheral blood	blood
44	chr9:71508800-71515200	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr9:71509000-71509200	Enhancers	Fetal Lung	lung
46	chr9:71509000-71509600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
47	chr9:71509000-71510000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr9:71509000-71511200	Enhancers	Primary T helper naive cells from peripheral blood	blood
49	chr9:71509000-71512200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
50	chr9:71509200-71509400	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links