Variant report

Variant	nsv614550
Chromosome Location	chr9:71574757-71843023
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:6226)
CpG islands
(count:3053)
Chromatin interactive
region (count:274)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:6226 , 50 per page) page: 1 2 3 4 5 6 7 ... 125

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:71651502-71651839	K562	blood:	n/a	n/a
2	ARID3A	chr9:71701730-71702036	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:71785862-71786328	K562	blood:	n/a	n/a
4	ARID3A	chr9:71614594-71614886	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:71746529-71747015	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:71795418-71795995	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:71785228-71785657	K562	blood:	n/a	n/a
8	ARID3A	chr9:71635426-71635919	K562	blood:	n/a	n/a
9	ARID3A	chr9:71650526-71650743	K562	blood:	n/a	n/a
10	ARID3A	chr9:71631852-71631872	K562	blood:	n/a	n/a
11	ARID3A	chr9:71822394-71822631	K562	blood:	n/a	n/a
12	ARID3A	chr9:71800451-71800521	K562	blood:	n/a	n/a
13	ARID3A	chr9:71598080-71598400	K562	blood:	n/a	n/a
14	ARID3A	chr9:71820008-71820023	K562	blood:	n/a	n/a
15	ARID3A	chr9:71768528-71769284	HepG2	liver:	n/a	n/a
16	ARID3A	chr9:71795383-71796025	K562	blood:	n/a	n/a
17	ARID3A	chr9:71801110-71801635	HepG2	liver:	n/a	n/a
18	ARID3A	chr9:71584469-71584970	HepG2	liver:	n/a	n/a
19	ARID3A	chr9:71584464-71585376	K562	blood:	n/a	n/a
20	ARID3A	chr9:71642563-71642873	K562	blood:	n/a	n/a
21	ARID3A	chr9:71830850-71831360	K562	blood:	n/a	n/a
22	ARID3A	chr9:71793431-71794296	HepG2	liver:	n/a	n/a
23	ARID3A	chr9:71788981-71788988	K562	blood:	n/a	n/a
24	ARID3A	chr9:71787032-71787270	HepG2	liver:	n/a	n/a
25	ARID3A	chr9:71735292-71735927	HepG2	liver:	n/a	n/a
26	ARID3A	chr9:71801237-71801527	K562	blood:	n/a	n/a
27	ARID3A	chr9:71719221-71720293	HepG2	liver:	n/a	chr9:71719768-71719784 chr9:71719315-71719331
28	ARID3A	chr9:71802085-71802622	K562	blood:	n/a	n/a
29	ARID3A	chr9:71819420-71819690	K562	blood:	n/a	n/a
30	ARID3A	chr9:71808074-71808402	HepG2	liver:	n/a	n/a
31	ARID3A	chr9:71803674-71804222	K562	blood:	n/a	n/a
32	ARID3A	chr9:71805069-71805695	HepG2	liver:	n/a	chr9:71805429-71805445 chr9:71805430-71805446
33	ARID3A	chr9:71783969-71784100	HepG2	liver:	n/a	n/a
34	ARID3A	chr9:71650444-71651128	HepG2	liver:	n/a	n/a
35	ARID3A	chr9:71808137-71808737	K562	blood:	n/a	n/a
36	ARID3A	chr9:71634748-71635103	K562	blood:	n/a	n/a
37	ARID3A	chr9:71821041-71821305	K562	blood:	n/a	n/a
38	ARID3A	chr9:71576402-71576900	K562	blood:	n/a	n/a
39	ATF1	chr9:71613777-71614153	K562	blood:	n/a	n/a
40	ATF1	chr9:71803941-71804270	K562	blood:	n/a	n/a
41	ATF1	chr9:71576511-71576777	K562	blood:	n/a	n/a
42	ATF1	chr9:71634756-71635094	K562	blood:	n/a	n/a
43	ATF1	chr9:71635543-71635967	K562	blood:	n/a	n/a
44	ATF1	chr9:71802159-71802633	K562	blood:	n/a	n/a
45	ATF1	chr9:71785927-71786382	K562	blood:	n/a	n/a
46	ATF1	chr9:71795567-71795986	K562	blood:	n/a	n/a
47	ATF1	chr9:71584518-71584727	K562	blood:	n/a	n/a
48	ATF1	chr9:71830870-71831226	K562	blood:	n/a	n/a
49	ATF1	chr9:71642591-71642873	K562	blood:	n/a	n/a
50	ATF1	chr9:71598096-71598406	K562	blood:	n/a	n/a

(count:3053 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:71837449-71837499	HEK293	kidney:	embryo
2	chr9:71736409-71736459	NT2-D1	testis:	n/a
3	chr9:71736999-71737049	SK-N-MC	brain:	n/a
4	chr9:71837449-71837499	HEK293	kidney:	embryo
5	chr9:71736409-71736459	NT2-D1	testis:	n/a
6	chr9:71736999-71737049	SK-N-MC	brain:	n/a
7	chr9:71623401-71623451	HRCEpiC	kidney:	n/a
8	chr9:71735666-71735716	ECC-1	luminal epithelium:	n/a
9	chr9:71661107-71661157	HRPEpiC	eye:	n/a
10	chr9:71736999-71737049	HCT-116	colon:	n/a
11	chr9:71802071-71802121	HCPEpiC	choroid plexus:	n/a
12	chr9:71737756-71737806	AoSMC	blood vessel:	n/a
13	chr9:71650719-71650769	U87	brain:	n/a
14	chr9:71735701-71735751	K562	blood:	n/a
15	chr9:71650237-71650287	GM12892	blood:	n/a
16	chr9:71737756-71737806	IMR90	lung:	fetal
17	chr9:71682302-71682352	SK-N-MC	brain:	n/a
18	chr9:71788759-71788809	AG10803	skin:	n/a
19	chr9:71650237-71650287	AoSMC	blood vessel:	n/a
20	chr9:71819910-71819960	HPAEpiC	pulmonary alveolar:	n/a
21	chr9:71819910-71819960	SK-N-MC	brain:	n/a
22	chr9:71628906-71628956	SAEC	small airway:	n/a
23	chr9:71802071-71802121	Jurkat	blood:	n/a
24	chr9:71652532-71652582	GM12892	blood:	n/a
25	chr9:71736999-71737049	HEK293	kidney:	embryo
26	chr9:71792936-71792986	SKMC	muscle:	n/a
27	chr9:71833386-71833436	GM12878	blood:	n/a
28	chr9:71627667-71627717	HRE	kidney:	n/a
29	chr9:71628906-71628956	HepG2	liver:	n/a
30	chr9:71737204-71737254	PANC-1	pancreas:	n/a
31	chr9:71792936-71792986	NHBE	bronchial:	n/a
32	chr9:71787000-71787050	ECC-1	luminal epithelium:	n/a
33	chr9:71837449-71837499	Jurkat	blood:	n/a
34	chr9:71685390-71685440	HNPCEpiC	eye:	n/a
35	chr9:71736999-71737049	MCF10A-Er-Src	breast:	n/a
36	chr9:71788748-71788798	HL-60	blood:	n/a
37	chr9:71628906-71628956	GM12878	blood:	n/a
38	chr9:71834813-71834863	HCM	heart:	n/a
39	chr9:71735648-71735698	HAEpiC	amniotic membrane:	n/a
40	chr9:71669714-71669764	SKMC	muscle:	n/a
41	chr9:71691305-71691355	HNPCEpiC	eye:	n/a
42	chr9:71652532-71652582	BE2_C	brain:	n/a
43	chr9:71833386-71833436	HEEpiC	esophagus:	n/a
44	chr9:71737204-71737254	U87	brain:	n/a
45	chr9:71736999-71737049	RPTEC	kidney:	n/a
46	chr9:71652532-71652582	HAEpiC	amniotic membrane:	n/a
47	chr9:71650331-71650381	GM06990	blood:	n/a
48	chr9:71691305-71691355	T-47D	breast:	n/a
49	chr9:71787000-71787050	GM12878	blood:	n/a
50	chr9:71652532-71652582	NHDF-neo	bronchial:	n/a

(count:274 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr9:71650082..71652083-chr9:71804483..71806988,2	K562	blood:
2	chr9:71573438..71576022-chr9:71576543..71579524,3	K562	blood:
3	chr9:71735247..71737414-chr9:71784064..71786040,3	MCF-7	breast:
4	chr9:71644052..71646200-chr9:71649443..71653055,3	MCF-7	breast:
5	chr9:71755797..71757532-chr9:71759956..71762001,2	MCF-7	breast:
6	chr9:71661053..71663941-chr9:71667266..71670111,2	K562	blood:
7	chr9:71772812..71775261-chr9:71795422..71797120,2	MCF-7	breast:
8	chr9:71649121..71652086-chr9:71654303..71656330,3	K562	blood:
9	chr9:71780838..71784047-chr9:71785849..71788919,3	MCF-7	breast:
10	chr9:71735373..71738833-chr9:71764136..71766985,4	MCF-7	breast:
11	chr9:71627843..71630592-chr9:71632071..71633725,3	K562	blood:
12	chr9:71699941..71701534-chr9:71703830..71705802,2	MCF-7	breast:
13	chr9:71734142..71739001-chr9:71788032..71795507,11	MCF-7	breast:
14	chr9:71199440..71199949-chr9:71642261..71643160,3	MCF-7	breast:
15	chr9:71679693..71682902-chr9:71734771..71738030,3	MCF-7	breast:
16	chr9:71696609..71699452-chr9:71736834..71738699,2	MCF-7	breast:
17	chr9:71612099..71614210-chr9:71616099..71618792,2	MCF-7	breast:
18	chr3:45017283..45018160-chr9:71735845..71736825,2	Hela-S3	cervix:
19	chr9:71784445..71787673-chr9:71788744..71791713,5	K562	blood:
20	chr9:71577956..71581283-chr9:71582183..71585440,6	K562	blood:
21	chr9:71807885..71810232-chr9:71825677..71828863,3	K562	blood:
22	chr9:71798131..71799806-chr9:71811511..71814165,2	MCF-7	breast:
23	chr13:48611578..48612294-chr9:71736012..71736825,2	Hela-S3	cervix:
24	chr9:71790152..71792261-chr9:71797735..71799818,2	MCF-7	breast:
25	chr3:49066502..49067181-chr9:71736337..71736850,2	Hela-S3	cervix:
26	chr9:71601422..71604412-chr9:71607352..71608900,2	MCF-7	breast:
27	chr9:71647332..71649670-chr9:71650617..71653266,2	K562	blood:
28	chr9:71590575..71592087-chr9:71593583..71595166,2	K562	blood:
29	chr9:71699941..71701534-chr9:71703830..71705802,2	MCF-7	breast:
30	chr9:71686014..71689293-chr9:71805643..71807349,3	K562	blood:
31	chr9:71751405..71753557-chr9:71754610..71757893,3	MCF-7	breast:
32	chr9:71655862..71658846-chr9:71661896..71664645,2	MCF-7	breast:
33	chr9:71577984..71579536-chr9:71582505..71585285,2	K562	blood:
34	chr9:71680760..71683108-chr9:71693749..71695954,2	K562	blood:
35	chr9:71600704..71602578-chr9:71603137..71605557,2	K562	blood:
36	chr9:71614377..71616166-chr9:71649558..71651998,2	MCF-7	breast:
37	chr9:71587881..71589909-chr9:71610346..71613287,2	K562	blood:
38	chr9:71794571..71798394-chr9:71798897..71802534,4	K562	blood:
39	chr9:71751405..71753557-chr9:71754610..71757893,3	MCF-7	breast:
40	chr9:71818288..71822682-chr9:71823295..71828458,5	K562	blood:
41	chr9:71621939..71625091-chr9:71631557..71634181,3	K562	blood:
42	chr9:71587881..71589909-chr9:71610346..71613287,2	K562	blood:
43	chr9:71755797..71757532-chr9:71759956..71762001,2	MCF-7	breast:
44	chr9:71572197..71575075-chr9:71576543..71579524,4	K562	blood:
45	chr9:71793727..71795446-chr9:71807376..71809123,2	MCF-7	breast:
46	chr9:71745094..71746594-chr9:71762879..71765148,2	MCF-7	breast:
47	chr9:71628740..71631389-chr9:71634679..71636239,2	K562	blood:
48	chr9:71745166..71747792-chr9:71751582..71754371,2	K562	blood:
49	chr9:71718282..71721853-chr9:71734600..71737822,4	MCF-7	breast:
50	chr9:71768614..71770999-chr9:71773509..71775018,2	K562	blood:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRKACG-1	chr9:71590580-71590757	ENSG00000249652
2	lnc-PRKACG-4	chr9:71625289-71625403	ucscGeneNc_uc004ahk_2
3	lnc-PRKACG-4	chr9:71624143-71625000	ucscGeneNc_uc004ahk_2
4	lnc-PRKACG-2	chr9:71785572-71785971	ENSG00000250944
5	lnc-PRKACG-2	chr9:71780235-71782388	ENSG00000250944
6	lnc-PRKACG-1	chr9:71590580-71590735	NONHSAT131759
7	lnc-TJP2-1	chr9:71736209-71736281	ENSG00000227410.1
8	lnc-TJP2-1	chr9:71736400-71737148	ENSG00000227410.1

No data

Variant related genes	Relation type
PRKACG	TF binding region
TJP2	TF binding region
FXN	TF binding region
ENSG00000270236	TF binding region
PRKACG	CpG island
TJP2	CpG island
FXN	CpG island
ENSG00000270236	CpG island
ENSG00000272434	chromatin interactions
ENSG00000124222	chromatin interactions
ENSG00000132849	chromatin interactions
ENSG00000165060	chromatin interactions
ENSG00000163812	chromatin interactions
ENSG00000001167	chromatin interactions
ENSG00000254995	chromatin interactions
ENSG00000126216	chromatin interactions
ENSG00000075914	chromatin interactions
ENSG00000178035	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000135063	chromatin interactions
ENSG00000270236	chromatin interactions
ENSG00000136159	chromatin interactions
ENSG00000119139	chromatin interactions
ENSG00000136143	chromatin interactions
ENSG00000187866	chromatin interactions
ENSG00000165059	chromatin interactions
APITD1	miRNA target sites
TRIP12	miRNA target sites
FLOT1	miRNA target sites

Extended variants
information (count: 10347 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:10347 , 50 per page) page: 1 2 3 4 5 6 7 ... 207

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10114872	chr9:71574757-71574758	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs571519613	chr9:71574861-71574862	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs539059127	chr9:71574917-71574918	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs547753442	chr9:71574920-71574921	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs566410496	chr9:71574927-71574928	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs145097222	chr9:71574997-71574998	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs556632962	chr9:71575034-71575035	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs576250299	chr9:71575050-71575051	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs536713163	chr9:71575108-71575109	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs147568772	chr9:71575115-71575116	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs73647048	chr9:71575174-71575175	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs11144523	chr9:71575180-71575181	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs34863414	chr9:71575186-71575187	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184150566	chr9:71575200-71575201	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574742017	chr9:71575225-71575226	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs560887840	chr9:71575269-71575270	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs576316898	chr9:71575325-71575326	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs141917946	chr9:71575348-71575349	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs199594199	chr9:71575357-71575358	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs187318570	chr9:71575398-71575399	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs191264651	chr9:71575428-71575429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs565407280	chr9:71575451-71575452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs142225549	chr9:71575452-71575453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs547811421	chr9:71575470-71575471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs565950204	chr9:71575471-71575472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs183781398	chr9:71575497-71575498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs548486143	chr9:71575537-71575538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs151232747	chr9:71575574-71575575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs189351336	chr9:71575602-71575603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs7038183	chr9:71575614-71575615	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs576908987	chr9:71575625-71575626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs7038200	chr9:71575645-71575646	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs7038312	chr9:71575675-71575676	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs548716959	chr9:71575724-71575725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs12349586	chr9:71575767-71575768	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs118129450	chr9:71575778-71575779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs575490387	chr9:71575802-71575803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs12237936	chr9:71575837-71575838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs565226659	chr9:71575855-71575856	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs545252874	chr9:71575864-71575865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs7020231	chr9:71575865-71575866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs541170757	chr9:71575898-71575899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs559663752	chr9:71575940-71575941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs530069157	chr9:71575942-71575943	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs559323341	chr9:71575950-71575951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs548449671	chr9:71575954-71575955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs570059414	chr9:71575995-71575996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs7032742	chr9:71575998-71575999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs552695707	chr9:71576010-71576011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371833893	chr9:71576067-71576068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	17899364	CNVD
Mantle cell lymphoma	19029149	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:7618 , 50 per page) page: 1 2 3 4 5 6 7 ... 153

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:71510400-71576200	Weak transcription	Stomach Mucosa	stomach
2	chr9:71557600-71578400	Weak transcription	HepG2	liver
3	chr9:71558200-71579200	Weak transcription	Colonic Mucosa	Colon
4	chr9:71562400-71578000	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr9:71562400-71579400	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr9:71563400-71578400	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr9:71565600-71587800	Weak transcription	Lung	lung
8	chr9:71565800-71576200	Weak transcription	Fetal Heart	heart
9	chr9:71567200-71574800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr9:71569000-71576600	Weak transcription	Small Intestine	intestine
11	chr9:71570200-71588600	Weak transcription	Right Ventricle	heart
12	chr9:71570400-71575400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr9:71570400-71582600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr9:71571200-71575200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr9:71571200-71589400	Weak transcription	Primary hematopoietic stem cells	blood
16	chr9:71571800-71581400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr9:71572200-71576600	Weak transcription	Duodenum Mucosa	Duodenum
18	chr9:71572200-71578400	Weak transcription	Primary B cells from peripheral blood	blood
19	chr9:71572400-71578000	Weak transcription	Primary B cells from cord blood	blood
20	chr9:71572400-71578000	Weak transcription	Left Ventricle	heart
21	chr9:71572400-71578400	Weak transcription	Fetal Intestine Small	intestine
22	chr9:71572400-71581200	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr9:71572400-71581400	Weak transcription	Primary monocytes fromperipheralblood	blood
24	chr9:71572400-71585600	Weak transcription	Aorta	Aorta
25	chr9:71572800-71574800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr9:71573200-71578000	Weak transcription	Fetal Intestine Large	intestine
27	chr9:71574800-71575200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr9:71574800-71575400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr9:71575200-71576400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr9:71575200-71581400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr9:71575400-71590600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr9:71576200-71578000	Enhancers	Fetal Heart	heart
33	chr9:71576200-71580000	Enhancers	Stomach Mucosa	stomach
34	chr9:71576400-71576600	Enhancers	Pancreas	Pancrea
35	chr9:71576400-71576800	Enhancers	Right Atrium	heart
36	chr9:71576400-71577000	Enhancers	K562	blood
37	chr9:71576400-71583000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr9:71576600-71577000	Enhancers	Small Intestine	intestine
39	chr9:71576600-71578200	Weak transcription	Pancreas	Pancrea
40	chr9:71576600-71580000	Enhancers	Duodenum Mucosa	Duodenum
41	chr9:71576800-71577000	Enhancers	Psoas Muscle	Psoas
42	chr9:71577000-71578400	Weak transcription	K562	blood
43	chr9:71577000-71579400	Weak transcription	Small Intestine	intestine
44	chr9:71577000-71581000	Weak transcription	Psoas Muscle	Psoas
45	chr9:71577800-71580600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr9:71578000-71578400	Weak transcription	Fetal Heart	heart
47	chr9:71578000-71578400	Enhancers	Left Ventricle	heart
48	chr9:71578000-71579600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr9:71578000-71580000	Enhancers	Fetal Intestine Large	intestine
50	chr9:71578000-71580200	Enhancers	Rectal Mucosa Donor 31	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links