Variant report

Variant	nsv614917
Chromosome Location	chr9:97343620-97369149
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr9:97365592-97365942	K562	blood:	n/a	n/a
2	ATF2	chr9:97365573-97365886	GM12878	blood:	n/a	n/a
3	ATF2	chr9:97365417-97366071	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr9:97365430-97365973	H1-hESC	embryonic stem cell:	n/a	n/a
5	BHLHE40	chr9:97365162-97365186	K562	blood:	n/a	n/a
6	BHLHE40	chr9:97365832-97365985	A549	lung:	n/a	n/a
7	BHLHE40	chr9:97365574-97365903	GM12878	blood:	n/a	n/a
8	BHLHE40	chr9:97347680-97347880	GM12878	blood:	n/a	n/a
9	BHLHE40	chr9:97346995-97347431	GM12878	blood:	n/a	n/a
10	BRCA1	chr9:97365633-97365938	Hela-S3	cervix:	n/a	n/a
11	BRCA1	chr9:97361802-97361813	HepG2	liver:	n/a	n/a
12	CEBPB	chr9:97348558-97348637	HepG2	liver:	n/a	n/a
13	CEBPB	chr9:97357229-97357599	A549	lung:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
14	CEBPB	chr9:97357335-97357593	ECC-1	luminal epithelium:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
15	CEBPB	chr9:97357338-97357550	ECC-1	luminal epithelium:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
16	CEBPB	chr9:97365697-97366038	H1-hESC	embryonic stem cell:	n/a	chr9:97365896-97365909
17	CEBPB	chr9:97357266-97357578	Hela-S3	cervix:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
18	CEBPB	chr9:97357338-97357547	K562	blood:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
19	CEBPB	chr9:97365658-97366057	K562	blood:	n/a	chr9:97365896-97365909
20	CEBPB	chr9:97365669-97366085	Hela-S3	cervix:	n/a	chr9:97365896-97365909
21	CEBPB	chr9:97357254-97357599	H1-hESC	embryonic stem cell:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
22	CEBPB	chr9:97357223-97357608	K562	blood:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
23	CEBPB	chr9:97357330-97357627	MCF-7	breast:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
24	CEBPB	chr9:97365718-97365988	A549	lung:	n/a	chr9:97365896-97365909
25	CEBPB	chr9:97365702-97366038	HepG2	liver:	n/a	chr9:97365896-97365909
26	CEBPB	chr9:97357244-97357599	IMR90	lung:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
27	CEBPB	chr9:97357315-97357702	A549	lung:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
28	CEBPB	chr9:97357229-97357674	K562	blood:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
29	CEBPB	chr9:97365714-97366032	IMR90	lung:	n/a	chr9:97365896-97365909
30	CEBPB	chr9:97357221-97357614	HepG2	liver:	n/a	chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357405-97357418 chr9:97357407-97357416 chr9:97357407-97357416 chr9:97357406-97357417
31	CHD2	chr9:97365546-97365907	H1-hESC	embryonic stem cell:	n/a	n/a
32	CREB1	chr9:97365533-97365926	A549	lung:	n/a	n/a
33	CREB1	chr9:97365373-97366090	H1-hESC	embryonic stem cell:	n/a	n/a
34	CREB1	chr9:97365558-97365997	K562	blood:	n/a	n/a
35	CREB1	chr9:97365448-97365991	HepG2	liver:	n/a	n/a
36	CREB1	chr9:97365428-97366071	K562	blood:	n/a	n/a
37	CREB1	chr9:97365600-97365937	A549	lung:	n/a	n/a
38	CREB1	chr9:97365440-97366076	H1-hESC	embryonic stem cell:	n/a	n/a
39	CREB1	chr9:97365577-97366035	HepG2	liver:	n/a	n/a
40	CTCF	chr9:97365635-97365867	GM10248	blood:	n/a	n/a
41	CTCF	chr9:97365680-97365830	HAc	cerebellar:	n/a	n/a
42	CTCF	chr9:97365227-97366730	A549	lung:	n/a	n/a
43	CTCF	chr9:97349500-97349650	AG09309	skin:	n/a	chr9:97349544-97349562 chr9:97349539-97349560
44	CTCF	chr9:97365680-97365830	GM12865	blood:	n/a	n/a
45	CTCF	chr9:97365514-97365906	K562	blood:	n/a	n/a
46	CTCF	chr9:97365586-97365901	Fibrobl	skin:	n/a	n/a
47	CTCF	chr9:97365680-97365830	HFF-Myc	foreskin:	n/a	n/a
48	CTCF	chr9:97365461-97365969	HepG2	liver:	n/a	n/a
49	CTCF	chr9:97365660-97365810	HUVEC	blood vessel:	n/a	n/a
50	CTCF	chr9:97365700-97365850	MCF-7	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:97355941-97355991	PFSK-1	brain:	n/a
2	chr9:97355941-97355991	PFSK-1	brain:	n/a
3	chr9:97355941-97355991	Hela-S3	cervix:	n/a
4	chr9:97356092-97356142	GM19239	blood:	n/a
5	chr9:97346942-97346992	NT2-D1	testis:	n/a
6	chr9:97349564-97349614	ECC-1	luminal epithelium:	n/a
7	chr9:97356092-97356142	HEEpiC	esophagus:	n/a
8	chr9:97365869-97365919	HRCEpiC	kidney:	n/a
9	chr9:97365869-97365919	HCPEpiC	choroid plexus:	n/a
10	chr9:97349564-97349614	IMR90	lung:	fetal
11	chr9:97355941-97355991	MCF10A-Er-Src	breast:	n/a
12	chr9:97355941-97355991	HRPEpiC	eye:	n/a
13	chr9:97349564-97349614	ProgFib	skin:	n/a
14	chr9:97355941-97355991	HCM	heart:	n/a
15	chr9:97349564-97349614	U87	brain:	n/a
16	chr9:97356092-97356142	HL-60	blood:	n/a
17	chr9:97365869-97365919	HRPEpiC	eye:	n/a
18	chr9:97356092-97356142	T-47D	breast:	n/a
19	chr9:97356092-97356142	AG10803	skin:	n/a
20	chr9:97356092-97356142	K562	blood:	n/a
21	chr9:97346942-97346992	BE2_C	brain:	n/a
22	chr9:97349564-97349614	PANC-1	pancreas:	n/a
23	chr9:97346942-97346992	ovcar-3	ovarian:	n/a
24	chr9:97346942-97346992	ProgFib	skin:	n/a
25	chr9:97346942-97346992	Hepatocyte	liver:	n/a
26	chr9:97365869-97365919	HL-60	blood:	n/a
27	chr9:97349564-97349614	K562	blood:	n/a
28	chr9:97349564-97349614	HIPEpiC	eye:	n/a
29	chr9:97365869-97365919	ECC-1	luminal epithelium:	n/a
30	chr9:97346942-97346992	PrEC	prostate:	n/a
31	chr9:97355941-97355991	ovcar-3	ovarian:	n/a
32	chr9:97346942-97346992	AG09319	gingival:	n/a
33	chr9:97349564-97349614	HL-60	blood:	n/a
34	chr9:97365869-97365919	U87	brain:	n/a
35	chr9:97365869-97365919	NHDF-neo	bronchial:	n/a
36	chr9:97356092-97356142	H1-hESC	embryonic stem cell:	embryo
37	chr9:97346942-97346992	A549	lung:	n/a
38	chr9:97356092-97356142	HPAEpiC	pulmonary alveolar:	n/a
39	chr9:97349564-97349614	HCF	heart:	n/a
40	chr9:97356092-97356142	A549	lung:	n/a
41	chr9:97365869-97365919	ProgFib	skin:	n/a
42	chr9:97355941-97355991	PrEC	prostate:	n/a
43	chr9:97365869-97365919	RPTEC	kidney:	n/a
44	chr9:97346942-97346992	NH-A	brain:	n/a
45	chr9:97355941-97355991	A549	lung:	n/a
46	chr9:97365869-97365919	AG09309	skin:	n/a
47	chr9:97346942-97346992	HRE	kidney:	n/a
48	chr9:97355941-97355991	HAEpiC	amniotic membrane:	n/a
49	chr9:97356092-97356142	GM06990	blood:	n/a
50	chr9:97349564-97349614	MCF-7	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:97315606..97319704-chr9:97363491..97367544,5	MCF-7	breast:
2	chr9:97346870..97349447-chr9:97350199..97352748,2	K562	blood:
3	chr9:97363454..97366255-chr9:97375188..97377706,2	K562	blood:
4	chr9:97316090..97317268-chr9:97365275..97366675,11	MCF-7	breast:
5	chr9:97346870..97349447-chr9:97350199..97352748,2	K562	blood:
6	chr9:97314619..97316650-chr9:97365797..97368541,2	K562	blood:
7	chr9:97315259..97318533-chr9:97363918..97367292,6	MCF-7	breast:
8	chr9:97343362..97346038-chr9:97364705..97367422,2	MCF-7	breast:
9	chr9:97365715..97366434-chr9:97385051..97385749,2	MCF-7	breast:
10	chr9:97314930..97317600-chr9:97349142..97351046,2	K562	blood:
11	chr9:97333743..97336722-chr9:97359939..97362910,2	MCF-7	breast:
12	chr9:97365760..97367307-chr9:97368033..97370545,2	MCF-7	breast:
13	chr9:97343362..97346038-chr9:97364705..97367422,2	MCF-7	breast:
14	chr9:97315728..97317499-chr9:97347623..97350500,3	MCF-7	breast:
15	chr9:97368431..97370242-chr9:97374099..97376854,2	MCF-7	breast:
16	chr9:97363139..97364825-chr9:97366128..97368386,2	K562	blood:
17	chr9:97368983..97370788-chr9:97391157..97393414,2	MCF-7	breast:
18	chr9:97365733..97367940-chr9:97370951..97372481,2	MCF-7	breast:
19	chr9:97316341..97317245-chr9:97365199..97365958,5	K562	blood:
20	chr9:97360979..97363553-chr9:97393005..97395544,2	MCF-7	breast:
21	chr9:97363139..97364825-chr9:97366128..97368386,2	K562	blood:
22	chr9:97368168..97369719-chr9:97371244..97374121,2	MCF-7	breast:
23	chr9:97366331..97367935-chr9:97380870..97383175,2	MCF-7	breast:
24	chr9:97364234..97367313-chr9:97400419..97403811,3	MCF-7	breast:
25	chr9:97315954..97317385-chr9:97365147..97366042,4	MCF-7	breast:
26	chr9:97332451..97335013-chr9:97342428..97345241,2	MCF-7	breast:
27	chr9:97365760..97367307-chr9:97368033..97370545,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HIATL1-14	chr9:97352637-97352847	l_3810_chr9:97352636-97355182_testes
2	lnc-HIATL1-14	chr9:97355041-97355182	l_3810_chr9:97352636-97355182_testes

Variant related genes	Relation type
FBP2	TF binding region
FBP2	CpG island
ENSG00000165140	chromatin interactions
ENSG00000231806	chromatin interactions

Extended variants
information (count: 1177 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:1177 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7870433	chr9:97343620-97343621	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs11792211	chr9:97343629-97343630	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs77205540	chr9:97343640-97343641	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs530792950	chr9:97343672-97343673	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs376098881	chr9:97343686-97343687	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs552188130	chr9:97343767-97343768	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs151184695	chr9:97343807-97343808	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs540480616	chr9:97343828-97343829	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs560347774	chr9:97343876-97343877	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs188424020	chr9:97343886-97343887	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs663385	chr9:97343939-97343940	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs10993253	chr9:97343959-97343960	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs79973396	chr9:97344011-97344012	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs551478375	chr9:97344024-97344025	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs575879618	chr9:97344025-97344026	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs539403229	chr9:97344089-97344090	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs557806106	chr9:97344177-97344178	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs374079621	chr9:97344190-97344191	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs111386237	chr9:97344204-97344205	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs540338215	chr9:97344205-97344206	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs555211147	chr9:97344207-97344208	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs374277338	chr9:97344252-97344253	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs78359117	chr9:97344295-97344296	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs544103748	chr9:97344300-97344301	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs562787009	chr9:97344331-97344332	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs549200012	chr9:97344338-97344339	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs533073678	chr9:97344429-97344430	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs545766109	chr9:97344498-97344499	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs138592246	chr9:97344620-97344621	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs62578750	chr9:97344633-97344634	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs201852372	chr9:97344634-97344635	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs113090863	chr9:97344635-97344636	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs201660314	chr9:97344637-97344638	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200253665	chr9:97344639-97344640	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs71366248	chr9:97344662-97344663	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs71498667	chr9:97344758-97344759	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs35999121	chr9:97344829-97344830	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs537709433	chr9:97344830-97344831	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs76433584	chr9:97344848-97344849	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs35662608	chr9:97344853-97344854	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs528526377	chr9:97344865-97344866	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs534857176	chr9:97344878-97344879	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs193022253	chr9:97344883-97344884	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs568510149	chr9:97344887-97344888	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs184164001	chr9:97344893-97344894	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs553637352	chr9:97344907-97344908	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs529471111	chr9:97344956-97344957	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs539030996	chr9:97344974-97344975	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs571838072	chr9:97344977-97344978	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs368883857	chr9:97344986-97344987	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Microcephaly	18830227	CNVD
overgrowth syndrome	16570072	CNVD
Effusion lymphoma	18079361	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:363 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:97317200-97354000	Weak transcription	Gastric	stomach
2	chr9:97335000-97349600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr9:97340000-97349000	Weak transcription	Fetal Stomach	stomach
4	chr9:97340600-97346400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr9:97342400-97347400	Strong transcription	Skeletal Muscle Female	skeletal muscle
6	chr9:97342800-97347600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr9:97343200-97343800	Enhancers	Duodenum Mucosa	Duodenum
8	chr9:97343400-97344600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr9:97343600-97344400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr9:97343600-97344400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr9:97343600-97344600	Enhancers	NHEK	skin
12	chr9:97343800-97344400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr9:97343800-97344400	Enhancers	HMEC	breast
14	chr9:97343800-97348800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr9:97344000-97344400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr9:97344400-97348800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr9:97346200-97347800	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr9:97346200-97351600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr9:97346400-97347400	Genic enhancers	Skeletal Muscle Male	skeletal muscle
20	chr9:97346600-97347200	Enhancers	Primary T cells fromperipheralblood	blood
21	chr9:97346600-97347400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
22	chr9:97346600-97347400	Enhancers	Primary T killer memory cells from peripheral blood	blood
23	chr9:97346600-97347400	Enhancers	Fetal Thymus	thymus
24	chr9:97346600-97347600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
25	chr9:97346600-97347600	Enhancers	Primary T helper cells fromperipheralblood	blood
26	chr9:97346600-97347600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
27	chr9:97346600-97347800	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr9:97346600-97347800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
29	chr9:97346600-97347800	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr9:97346600-97348000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
31	chr9:97346800-97347600	Bivalent Enhancer	Primary T cells from cord blood	blood
32	chr9:97347000-97347600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr9:97347000-97347800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
34	chr9:97347000-97348200	Enhancers	GM12878-XiMat	blood
35	chr9:97347200-97347800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr9:97347200-97347800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
37	chr9:97347400-97348800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
38	chr9:97347400-97351200	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr9:97347400-97353800	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr9:97347600-97347800	Enhancers	Sigmoid Colon	Sigmoid Colon
41	chr9:97347600-97374000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
42	chr9:97347800-97348800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
43	chr9:97347800-97348800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
44	chr9:97347800-97348800	Weak transcription	Fetal Muscle Leg	muscle
45	chr9:97347800-97349000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr9:97347800-97349200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr9:97348200-97348800	Weak transcription	GM12878-XiMat	blood
48	chr9:97348400-97349000	Active TSS	Placenta	Placenta
49	chr9:97348600-97348800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr9:97348600-97348800	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links