Variant report
Variant | nsv615778 |
---|---|
Chromosome Location | chr9:136877402-136879241 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs373719939 | chr9:136877405-136877406 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs77646328 | chr9:136877426-136877427 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs377606346 | chr9:136877441-136877442 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs369090415 | chr9:136877453-136877454 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs372694107 | chr9:136877465-136877466 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs377443554 | chr9:136877474-136877475 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs144664552 | chr9:136877477-136877478 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs576569440 | chr9:136877478-136877479 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs543982794 | chr9:136877482-136877483 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs368343923 | chr9:136877489-136877490 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs200524879 | chr9:136877497-136877498 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs372996298 | chr9:136877501-136877502 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs562378495 | chr9:136877502-136877503 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs376243316 | chr9:136877508-136877509 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs55880010 | chr9:136877525-136877526 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs541781179 | chr9:136877527-136877528 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs374001690 | chr9:136877549-136877550 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs138132811 | chr9:136877556-136877557 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs370345104 | chr9:136877561-136877562 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs373725765 | chr9:136877573-136877574 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs201683468 | chr9:136877578-136877579 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs372752851 | chr9:136877585-136877586 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs376980166 | chr9:136877594-136877595 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs182272614 | chr9:136877602-136877603 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs74407687 | chr9:136877609-136877610 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs376808213 | chr9:136877616-136877617 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs112767122 | chr9:136877621-136877622 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs111592248 | chr9:136877626-136877627 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs55798455 | chr9:136877628-136877629 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs75425045 | chr9:136877633-136877634 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs76291471 | chr9:136877642-136877643 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs369974681 | chr9:136877645-136877646 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs111419571 | chr9:136877650-136877651 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs79487821 | chr9:136877657-136877658 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs573772972 | chr9:136877660-136877661 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs78970998 | chr9:136877681-136877682 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs373230781 | chr9:136877690-136877691 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs372566109 | chr9:136877693-136877694 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs112595658 | chr9:136877698-136877699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs370560701 | chr9:136877705-136877706 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs375209629 | chr9:136877708-136877709 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs533632381 | chr9:136877722-136877723 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs367741719 | chr9:136877729-136877730 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs370468136 | chr9:136877732-136877733 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs529492357 | chr9:136877738-136877739 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs376039799 | chr9:136877741-136877742 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs368629133 | chr9:136877756-136877757 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs372282661 | chr9:136877765-136877766 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs375613006 | chr9:136877780-136877781 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs565824029 | chr9:136877789-136877790 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Chordoma | 21602918 | CNVD |
Renal cell carcinoma | 18592004 | CNVD |
Developmental delay | 19490664 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
Medulloblastoma | 21979893 | CNVD |
microdeletion syndrome | 16199537 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 16751803 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Leukemia | 17361228 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Glioblastoma | 16823260 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Brain cancer | 20823417 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Astrocytoma | 17387387 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Heart disease | 21282601 | CNVD |
Lung cancer | 18438408 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 17603634 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cardiac fibroma | 18329553 | CNVD |
Lung cancer | 19147751 | CNVD |
Melanoma | 18172304 | CNVD |
Cervical cancer | 16585170 | CNVD |
Ependymoma | 19289631 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Cervical cancer | 17311676 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Breast cancer | 16608533 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Chordoma | 18071362 | CNVD |
small cell lung cancer | 20016488 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Kleefstra Syndrome | 21538692 | CNVD |
Disorders of sex development | 22290220 | CNVD |
Cancer | 21183584 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Abnormal phenotypes | 18644119 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Tuberous sclerosis | 19566914 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20581869 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Bladder cancer | 21909424 | CNVD |
Cancer | 17160897 | CNVD |
Ependymoma | 20639864 | CNVD |
Breast cancer | 20932292 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Idiopathic chronic pancreatitis | 21572526 | CNVD |
Kleefstra syndrome | 22670141 | CNVD |
Schizophrenia | 22241247 | CNVD |
9q deletion syndrome | 16826528 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Non-syndromic sensorineural hearing loss | 19293338 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:136876200-136889800 | Weak transcription | Right Atrium | heart |