Variant report

Variant nsv68
Chromosome Location chr1:152549956-152608472
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152543000-152552600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:152547000-152552400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:152549400-152550800 Enhancers Muscle Satellite Cultured Cells --
4 chr1:152549400-152551400 Enhancers HSMMtube muscle
5 chr1:152549400-152551600 Enhancers HSMM muscle
6 chr1:152549800-152551400 Weak transcription GM12878-XiMat blood
7 chr1:152550800-152555200 Weak transcription Muscle Satellite Cultured Cells --
8 chr1:152551400-152552600 Enhancers GM12878-XiMat blood
9 chr1:152551600-152552800 Weak transcription HSMM muscle
10 chr1:152552400-152553200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:152552400-152553400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:152552600-152553200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:152552600-152553200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:152552600-152553400 Enhancers HMEC breast
15 chr1:152552800-152553200 Enhancers HSMM muscle
16 chr1:152552800-152553400 Enhancers NHEK skin
17 chr1:152553400-152555000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:152553400-152555000 Weak transcription HMEC breast
19 chr1:152553400-152555200 Weak transcription NHEK skin
20 chr1:152555000-152555600 Flanking Active TSS A549 lung
21 chr1:152555000-152555600 Enhancers HMEC breast
22 chr1:152555000-152555800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:152555200-152555600 Enhancers NHEK skin
24 chr1:152555400-152555600 Enhancers Muscle Satellite Cultured Cells --
25 chr1:152555400-152555800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:152569600-152570200 Enhancers Liver Liver
27 chr1:152591000-152592600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:152591000-152592600 ZNF genes & repeats Adipose Nuclei Adipose
29 chr1:152592600-152594600 Weak transcription Adipose Nuclei Adipose
30 chr1:152592600-152595200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:152594400-152595000 Enhancers HSMM muscle
32 chr1:152594600-152595400 Enhancers Adipose Nuclei Adipose
33 chr1:152594600-152595600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:152594600-152596200 Enhancers Ovary ovary
35 chr1:152594800-152595600 Enhancers Muscle Satellite Cultured Cells --
36 chr1:152595000-152596400 Enhancers Liver Liver
37 chr1:152595000-152596400 Flanking Active TSS HSMM muscle
38 chr1:152595000-152596400 Enhancers HSMMtube muscle
39 chr1:152595200-152596000 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr1:152595200-152596600 Enhancers Monocytes-CD14+_RO01746 blood
41 chr1:152595400-152595600 Flanking Active TSS Adipose Nuclei Adipose
42 chr1:152595400-152596000 Enhancers Thymus Thymus
43 chr1:152595600-152595800 Enhancers Adipose Nuclei Adipose
44 chr1:152595600-152596000 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:152595600-152596000 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr1:152595600-152596200 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr1:152595600-152596200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:152595600-152596200 Active TSS Brain Anterior Caudate brain
49 chr1:152595600-152596200 Enhancers Esophagus oesophagus
50 chr1:152595600-152596400 Enhancers Primary monocytes fromperipheralblood blood

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