Variant report

Variant	nsv6925
Chromosome Location	chrX:58263801-58308657
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 698 )
Associated
traits (count: 38 )

Variant overlapped rSNPs/rCNVs (count:698 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181920565	chrX:58276785-58276786	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs185922379	chrX:58276790-58276791	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs377158585	chrX:58276792-58276793	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs56060365	chrX:58276973-58276974	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs376484097	chrX:58276987-58276988	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs539211938	chrX:58277013-58277014	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs146026989	chrX:58277047-58277048	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs190782642	chrX:58277063-58277064	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs183025865	chrX:58277138-58277139	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs187934917	chrX:58277457-58277458	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs557946703	chrX:58277460-58277461	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs370927480	chrX:58277576-58277577	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs191552684	chrX:58277698-58277699	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs73627812	chrX:58277877-58277878	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs73627813	chrX:58277883-58277884	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs182963593	chrX:58277884-58277885	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs151175703	chrX:58277962-58277963	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs534818530	chrX:58277972-58277973	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs201131644	chrX:58278188-58278189	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs5947427	chrX:58278219-58278220	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs5947428	chrX:58278341-58278342	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs187598542	chrX:58278427-58278428	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs374147513	chrX:58278433-58278434	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs5947429	chrX:58278462-58278463	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs192414345	chrX:58278517-58278518	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs113578926	chrX:58278543-58278544	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs149901516	chrX:58278547-58278548	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs183404074	chrX:58278720-58278721	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs374454651	chrX:58278737-58278738	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs144907915	chrX:58278742-58278743	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs72621749	chrX:58278832-58278833	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs566201905	chrX:58278883-58278884	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs141957846	chrX:58278903-58278904	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs539920951	chrX:58278955-58278956	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs558167958	chrX:58278965-58278966	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs576350332	chrX:58279013-58279014	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs146915570	chrX:58279048-58279049	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs147946352	chrX:58279073-58279074	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs141772642	chrX:58279104-58279105	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs371158286	chrX:58279182-58279183	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs143744673	chrX:58279187-58279188	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs187692355	chrX:58279307-58279308	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs148135918	chrX:58279308-58279309	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs192306706	chrX:58279342-58279343	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs573961264	chrX:58279410-58279411	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs141906492	chrX:58279469-58279470	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs150217662	chrX:58279515-58279516	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs541249007	chrX:58279543-58279544	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs184649582	chrX:58279589-58279590	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs189477484	chrX:58279690-58279691	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:38)

Disease	PMID	Source
Cancer	21637783	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Cancer	16751803	CNVD
Intellectual disability	23615299	CNVD
Neuroblastoma	18923191	CNVD
Burkitt''s lymphoma	20823134	CNVD
Astrocytoma	17387387	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	21979893	CNVD
Schizophrenia	23904455	CNVD
Olfactory neuroblastoma	18408657	CNVD
infertile	22614455	CNVD
Acute myeloid leukemia	20729466	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	22286061	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	21251322	CNVD
Cancer	20581869	CNVD
Multiple myeloma	20724749	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Cancer	20164919	CNVD
Thyroid cancer	19087340	CNVD
lymphocytic leukemia	21291569	CNVD
Cervical cancer	21062161	CNVD
Follicular lymphoma	20505157	CNVD
primary effusion lymphomas	17116491	CNVD
Testicular germ cell tumor	18059402	CNVD
Testicular cancer	18059402	CNVD
Seminomas	18059402	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:58276600-58280000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
2	chrX:58279400-58280200	Enhancers	Brain Hippocampus Middle	brain
3	chrX:58280200-58313600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chrX:58282400-58296600	ZNF genes & repeats	Fetal Stomach	stomach
5	chrX:58290800-58292200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
6	chrX:58295000-58298000	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
7	chrX:58307400-58313200	ZNF genes & repeats	Fetal Stomach	stomach

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