Variant report

Variant	nsv7890
Chromosome Location	chr6:35692021-35701911
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1516)
CpG islands
(count:855)
Chromatin interactive
region (count:66)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1516 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:35694119-35694935	K562	blood:	n/a	n/a
2	ARID3A	chr6:35699601-35700327	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:35699620-35699948	K562	blood:	n/a	n/a
4	ARID3A	chr6:35694393-35694795	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:35698851-35699010	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:35697549-35697744	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:35695709-35695741	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:35699249-35699300	HepG2	liver:	n/a	n/a
9	ATF1	chr6:35694083-35694453	K562	blood:	n/a	n/a
10	ATF2	chr6:35699176-35700546	GM12878	blood:	n/a	n/a
11	ATF2	chr6:35699216-35700066	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr6:35695755-35696312	GM12878	blood:	n/a	n/a
13	ATF2	chr6:35698603-35699142	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr6:35699716-35700320	GM12878	blood:	n/a	n/a
15	ATF3	chr6:35694049-35694492	K562	blood:	n/a	n/a
16	ATF3	chr6:35695192-35695720	K562	blood:	n/a	chr6:35695437-35695457 chr6:35695448-35695457 chr6:35695448-35695468
17	BACH1	chr6:35699238-35700401	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:35695034-35696350	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr6:35695379-35696448	K562	blood:	n/a	n/a
20	BATF	chr6:35695819-35696167	GM12878	blood:	n/a	n/a
21	BATF	chr6:35699644-35699870	GM12878	blood:	n/a	n/a
22	BCL11A	chr6:35699595-35700162	GM12878	blood:	n/a	chr6:35699902-35699911
23	BCL11A	chr6:35695914-35696188	GM12878	blood:	n/a	n/a
24	BCL11A	chr6:35699613-35699893	GM12878	blood:	n/a	n/a
25	BCL3	chr6:35699573-35700247	A549	lung:	n/a	chr6:35699902-35699911
26	BCL3	chr6:35695784-35696176	GM12878	blood:	n/a	chr6:35695862-35695875
27	BCL3	chr6:35699144-35700217	GM12878	blood:	n/a	chr6:35699385-35699398 chr6:35699170-35699183 chr6:35699166-35699179 chr6:35699902-35699911
28	BCLAF1	chr6:35695468-35696231	GM12878	blood:	n/a	chr6:35695862-35695875 chr6:35695717-35695730
29	BCLAF1	chr6:35699206-35700237	GM12878	blood:	n/a	chr6:35699385-35699398 chr6:35699902-35699911
30	BCLAF1	chr6:35699180-35700356	GM12878	blood:	n/a	chr6:35699385-35699398 chr6:35699902-35699911
31	BCLAF1	chr6:35695561-35696352	GM12878	blood:	n/a	chr6:35695862-35695875 chr6:35695717-35695730
32	BHLHE40	chr6:35695280-35696166	HepG2	liver:	n/a	chr6:35695448-35695457 chr6:35695446-35695459 chr6:35695449-35695458 chr6:35695442-35695463 chr6:35695447-35695456 chr6:35695448-35695457
33	BHLHE40	chr6:35693986-35696469	K562	blood:	n/a	chr6:35695448-35695457 chr6:35695446-35695459 chr6:35695449-35695458 chr6:35695442-35695463 chr6:35695447-35695456 chr6:35696177-35696193 chr6:35695448-35695457
34	BHLHE40	chr6:35699027-35700341	GM12878	blood:	n/a	n/a
35	BHLHE40	chr6:35699403-35700412	K562	blood:	n/a	n/a
36	BHLHE40	chr6:35695151-35696267	GM12878	blood:	n/a	chr6:35695448-35695457 chr6:35695446-35695459 chr6:35695449-35695458 chr6:35695442-35695463 chr6:35695447-35695456 chr6:35696177-35696193 chr6:35695448-35695457
37	BHLHE40	chr6:35699950-35700280	A549	lung:	n/a	n/a
38	BHLHE40	chr6:35699322-35700512	HepG2	liver:	n/a	n/a
39	BHLHE40	chr6:35699934-35700221	HepG2	liver:	n/a	n/a
40	BHLHE40	chr6:35697721-35697726	K562	blood:	n/a	n/a
41	BRCA1	chr6:35699892-35699897	HepG2	liver:	n/a	n/a
42	BRCA1	chr6:35700035-35700232	Hela-S3	cervix:	n/a	n/a
43	BRCA1	chr6:35695445-35695590	HepG2	liver:	n/a	n/a
44	BRCA1	chr6:35699769-35700180	GM12878	blood:	n/a	n/a
45	BRCA1	chr6:35695545-35695563	H1-hESC	embryonic stem cell:	n/a	n/a
46	BRCA1	chr6:35696177-35696330	H1-hESC	embryonic stem cell:	n/a	n/a
47	BRCA1	chr6:35696007-35696238	GM12878	blood:	n/a	n/a
48	BRCA1	chr6:35699691-35700178	H1-hESC	embryonic stem cell:	n/a	n/a
49	BRCA1	chr6:35695384-35695641	Hela-S3	cervix:	n/a	n/a
50	BRCA1	chr6:35696017-35696280	Hela-S3	cervix:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:35699499-35699549	GM19239	blood:	n/a
2	chr6:35699499-35699549	GM19239	blood:	n/a
3	chr6:35700382-35700432	AG09309	skin:	n/a
4	chr6:35699952-35700002	HRCEpiC	kidney:	n/a
5	chr6:35695489-35695539	PFSK-1	brain:	n/a
6	chr6:35695489-35695539	AG09319	gingival:	n/a
7	chr6:35699952-35700002	HEEpiC	esophagus:	n/a
8	chr6:35695859-35695909	AG10803	skin:	n/a
9	chr6:35699425-35699475	Caco-2	colon:	n/a
10	chr6:35696870-35696920	SKMC	muscle:	n/a
11	chr6:35697759-35697809	HepG2	liver:	n/a
12	chr6:35695934-35695984	PANC-1	pancreas:	n/a
13	chr6:35696061-35696111	ECC-1	luminal epithelium:	n/a
14	chr6:35697185-35697235	HCF	heart:	n/a
15	chr6:35696300-35696350	T-47D	breast:	n/a
16	chr6:35699499-35699549	BE2_C	brain:	n/a
17	chr6:35699425-35699475	GM06990	blood:	n/a
18	chr6:35700382-35700432	HUVEC	blood vessel:	n/a
19	chr6:35697759-35697809	T-47D	breast:	n/a
20	chr6:35695489-35695539	NHBE	bronchial:	n/a
21	chr6:35695859-35695909	BJ	skin:	n/a
22	chr6:35694245-35694295	Hepatocyte	liver:	n/a
23	chr6:35695489-35695539	NT2-D1	testis:	n/a
24	chr6:35699425-35699475	SAEC	small airway:	n/a
25	chr6:35700382-35700432	SK-N-SH	brain:	n/a
26	chr6:35699952-35700002	HL-60	blood:	n/a
27	chr6:35694245-35694295	AG04449	skin:	fetal
28	chr6:35693573-35693623	GM06990	blood:	n/a
29	chr6:35696300-35696350	HAEpiC	amniotic membrane:	n/a
30	chr6:35697185-35697235	PrEC	prostate:	n/a
31	chr6:35697759-35697809	GM19239	blood:	n/a
32	chr6:35699425-35699475	HCT-116	colon:	n/a
33	chr6:35697759-35697809	RPTEC	kidney:	n/a
34	chr6:35693573-35693623	GM19239	blood:	n/a
35	chr6:35697759-35697809	PFSK-1	brain:	n/a
36	chr6:35695489-35695539	NB4	blood:	n/a
37	chr6:35695934-35695984	SK-N-SH_RA	brain:	n/a
38	chr6:35699499-35699549	Hela-S3	cervix:	n/a
39	chr6:35694245-35694295	HEEpiC	esophagus:	n/a
40	chr6:35697185-35697235	SK-N-SH	brain:	n/a
41	chr6:35695859-35695909	HIPEpiC	eye:	n/a
42	chr6:35695934-35695984	AG04449	skin:	fetal
43	chr6:35696870-35696920	GM06990	blood:	n/a
44	chr6:35693573-35693623	HepG2	liver:	n/a
45	chr6:35696300-35696350	Jurkat	blood:	n/a
46	chr6:35696300-35696350	RPTEC	kidney:	n/a
47	chr6:35695489-35695539	T-47D	breast:	n/a
48	chr6:35695859-35695909	HPAEpiC	pulmonary alveolar:	n/a
49	chr6:35696870-35696920	HPAEpiC	pulmonary alveolar:	n/a
50	chr6:35696870-35696920	IMR90	lung:	fetal

(count:66 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:35690475..35697423-chr6:35697728..35703210,15	MCF-7	breast:
2	chr15:78729827..78730345-chr6:35699757..35700557,2	Hela-S3	cervix:
3	chr6:35653875..35657933-chr6:35692950..35698749,12	MCF-7	breast:
4	chr6:35669147..35672136-chr6:35698137..35700263,2	K562	blood:
5	chr6:35655704..35659364-chr6:35691947..35694201,3	MCF-7	breast:
6	chr6:35631949..35633553-chr6:35698713..35700323,2	K562	blood:
7	chr6:35463387..35465037-chr6:35698292..35700559,2	K562	blood:
8	chr6:35689928..35692023-chr6:35693949..35695467,2	MCF-7	breast:
9	chr6:35662464..35663986-chr6:35697042..35699803,2	K562	blood:
10	chr1:155197092..155197880-chr6:35699266..35699994,2	NB4	blood:
11	chr6:35462442..35464169-chr6:35698121..35700196,2	MCF-7	breast:
12	chr6:35551325..35552296-chr6:35696466..35697031,2	MCF-7	breast:
13	chr6:35463864..35467437-chr6:35691991..35696071,4	K562	blood:
14	chr6:35632201..35634939-chr6:35692167..35695081,2	K562	blood:
15	chr6:35678386..35681633-chr6:35693027..35696348,6	K562	blood:
16	chr6:35465223..35467694-chr6:35696445..35698937,2	K562	blood:
17	chr6:35697087..35699165-chr6:35888086..35890561,2	K562	blood:
18	chr6:35632044..35634360-chr6:35695498..35697741,2	K562	blood:
19	chr6:35435945..35437939-chr6:35694170..35698146,4	MCF-7	breast:
20	chr6:35265561..35267595-chr6:35699405..35701573,2	K562	blood:
21	chr6:35646147..35649006-chr6:35694213..35696052,2	K562	blood:
22	chr6:35695422..35695996-chrX:85302095..85302896,2	Hela-S3	cervix:
23	chr1:28975092..28975663-chr6:35695502..35696163,2	Hela-S3	cervix:
24	chr6:35699062..35702705-chr6:35703417..35705875,6	MCF-7	breast:
25	chr6:35500888..35503131-chr6:35698327..35701052,2	MCF-7	breast:
26	chr6:35692072..35693972-chr6:35694350..35696021,2	MCF-7	breast:
27	chr6:35551672..35552216-chr6:35699614..35700365,2	K562	blood:
28	chr6:35436180..35438178-chr6:35699810..35702665,3	K562	blood:
29	chr6:35686847..35689699-chr6:35698939..35701035,2	MCF-7	breast:
30	chr6:35434857..35438603-chr6:35692996..35696802,4	K562	blood:
31	chr6:35436116..35438091-chr6:35698017..35699620,2	K562	blood:
32	chr6:35697883..35699613-chr6:35708229..35709821,2	K562	blood:
33	chr6:35464241..35466956-chr6:35695881..35700309,4	MCF-7	breast:
34	chr6:35449349..35451831-chr6:35697672..35699376,2	K562	blood:
35	chr6:35692072..35693972-chr6:35694350..35696021,2	MCF-7	breast:
36	chr6:35668653..35671140-chr6:35695541..35697338,2	K562	blood:
37	chr6:35699523..35701571-chr6:35711571..35714050,2	K562	blood:
38	chr6:35654560..35658324-chr6:35694292..35699560,11	MCF-7	breast:
39	chr6:35537206..35539251-chr6:35700274..35702012,2	K562	blood:
40	chr6:35605150..35607855-chr6:35700616..35702117,2	K562	blood:
41	chr20:45985754..45987597-chr6:35699080..35701646,2	MCF-7	breast:
42	chr6:35434775..35437842-chr6:35701549..35705876,5	MCF-7	breast:
43	chr6:35464733..35466429-chr6:35694489..35696071,2	K562	blood:
44	chr6:35474347..35477035-chr6:35697866..35700088,2	K562	blood:
45	chr6:35436055..35438159-chr6:35694441..35696005,2	K562	blood:
46	chr6:35699802..35701633-chr6:35743003..35745229,3	MCF-7	breast:
47	chr10:74925555..74927727-chr6:35696116..35698997,2	K562	blood:
48	chr6:35655179..35657311-chr6:35699143..35705251,6	MCF-7	breast:
49	chr6:35465082..35466862-chr6:35699908..35701462,2	MCF-7	breast:
50	chr6:35633645..35638870-chr6:35697400..35700718,4	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FKBP5-1	chr6:35699269-35699346	NONHSAT112190
2	lnc-FKBP5-1	chr6:35695982-35696037	NONHSAT112190
3	lnc-FKBP5-1	chr6:35694539-35694910	NONHSAT112190
4	lnc-FKBP5-1	chr6:35694540-35694910	NONHSAT112191
5	lnc-FKBP5-1	chr6:35696285-35696397	NONHSAT112190
6	lnc-FKBP5-1	chr6:35701644-35701804	ENSG00000232909.1
7	lnc-FKBP5-1	chr6:35697099-35697283	NONHSAT112190
8	lnc-FKBP5-1	chr6:35701620-35701804	NONHSAT112190
9	lnc-FKBP5-1	chr6:35699970-35700204	NONHSAT112190

No data

Variant related genes	Relation type
FKBP5	TF binding region
ARMC12	TF binding region
FKBP5	CpG island
ARMC12	CpG island
ENSG00000223063	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000122882	chromatin interactions
ENSG00000265527	chromatin interactions
ENSG00000232909	chromatin interactions
ENSG00000188419	chromatin interactions
ENSG00000160766	chromatin interactions
ENSG00000096063	chromatin interactions
ENSG00000112078	chromatin interactions
ENSG00000157343	chromatin interactions
ENSG00000160194	chromatin interactions
ENSG00000196748	chromatin interactions
ENSG00000179165	chromatin interactions
ENSG00000096060	chromatin interactions
ENSG00000023892	chromatin interactions
ENSG00000007866	chromatin interactions

Extended variants
information (count: 368 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:368 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528874245	chr6:35692096-35692097	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs116697869	chr6:35692148-35692149	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs562536956	chr6:35692184-35692185	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs191629931	chr6:35692185-35692186	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs369787144	chr6:35692191-35692192	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs368691226	chr6:35692244-35692245	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs571019815	chr6:35692251-35692252	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs74913227	chr6:35692266-35692267	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs547255756	chr6:35692316-35692317	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs568142432	chr6:35692333-35692334	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs9462105	chr6:35692335-35692336	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs372107528	chr6:35692418-35692419	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs149880928	chr6:35692427-35692428	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs76252997	chr6:35692534-35692535	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs78711722	chr6:35692536-35692537	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs550675351	chr6:35692551-35692552	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs139366300	chr6:35692602-35692603	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs370779274	chr6:35692619-35692620	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs9462106	chr6:35692642-35692643	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs539623071	chr6:35692706-35692707	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs557709053	chr6:35692768-35692769	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs572978651	chr6:35692830-35692831	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs533873187	chr6:35692837-35692838	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs12203716	chr6:35692928-35692929	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs573697155	chr6:35692945-35692946	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs544188570	chr6:35692993-35692994	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs13192477	chr6:35692998-35692999	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs13192481	chr6:35693003-35693004	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs13192279	chr6:35693028-35693029	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs577713934	chr6:35693029-35693030	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs13192290	chr6:35693053-35693054	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs13192176	chr6:35693064-35693065	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs556140856	chr6:35693095-35693096	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs545075839	chr6:35693150-35693151	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs181946161	chr6:35693155-35693156	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs528662006	chr6:35693157-35693158	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs113007122	chr6:35693163-35693164	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs148703011	chr6:35693188-35693189	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs186319613	chr6:35693247-35693248	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs529257937	chr6:35693363-35693364	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs73419740	chr6:35693481-35693482	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs144506485	chr6:35693563-35693564	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs539582942	chr6:35693564-35693565	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs551831691	chr6:35693590-35693591	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs79163804	chr6:35693618-35693619	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs533954671	chr6:35693625-35693626	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs34236644	chr6:35693643-35693644	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs555711747	chr6:35693651-35693652	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs573936875	chr6:35693673-35693674	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs538939137	chr6:35693697-35693698	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Lung cancer	19153074	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1377 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35687600-35692200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:35687600-35694000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr6:35688400-35692200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr6:35688400-35693600	Weak transcription	Osteobl	bone
5	chr6:35688400-35693800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr6:35688400-35695000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr6:35688400-35695000	Enhancers	Right Ventricle	heart
8	chr6:35688600-35692200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr6:35688600-35692800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:35688600-35693000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr6:35688600-35693000	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr6:35688600-35693000	Weak transcription	Rectal Smooth Muscle	rectum
13	chr6:35688600-35693200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr6:35688600-35693200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr6:35688600-35693200	Weak transcription	Fetal Kidney	kidney
16	chr6:35688600-35693200	Weak transcription	HSMMtube	muscle
17	chr6:35688600-35693400	Weak transcription	Fetal Lung	lung
18	chr6:35688600-35693600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:35688600-35693600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr6:35688600-35693600	Weak transcription	NHDF-Ad	bronchial
21	chr6:35688600-35693800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr6:35688600-35694400	Weak transcription	Fetal Brain Female	brain
23	chr6:35688600-35694800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr6:35688600-35695200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr6:35688800-35692200	Weak transcription	Primary T cells from cord blood	blood
26	chr6:35688800-35692600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr6:35688800-35692600	Weak transcription	HSMM	muscle
28	chr6:35688800-35692800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr6:35688800-35693000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr6:35688800-35693000	Weak transcription	NHEK	skin
31	chr6:35688800-35693200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr6:35688800-35693200	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr6:35688800-35693200	Weak transcription	Fetal Heart	heart
34	chr6:35688800-35693200	Enhancers	Fetal Thymus	thymus
35	chr6:35688800-35693400	Weak transcription	HUVEC	blood vessel
36	chr6:35688800-35694000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr6:35689000-35692600	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr6:35689000-35693000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr6:35689200-35693200	Weak transcription	GM12878-XiMat	blood
40	chr6:35689200-35694800	Enhancers	Sigmoid Colon	Sigmoid Colon
41	chr6:35689400-35693200	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr6:35689600-35693200	Enhancers	Rectal Mucosa Donor 31	rectum
43	chr6:35689600-35693400	Enhancers	Rectal Mucosa Donor 29	rectum
44	chr6:35689600-35693600	Enhancers	Liver	Liver
45	chr6:35689600-35695000	Enhancers	Pancreas	Pancrea
46	chr6:35689800-35693200	Enhancers	Duodenum Mucosa	Duodenum
47	chr6:35689800-35693400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr6:35689800-35693800	Enhancers	Brain Angular Gyrus	brain
49	chr6:35689800-35695000	Enhancers	Left Ventricle	heart
50	chr6:35689800-35695000	Enhancers	Right Atrium	heart

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