No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs77104735 |
chr1:146643346-146643347 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs138431757 |
chr1:146643365-146643366 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs587635080 |
chr1:146643477-146643478 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs72708505 |
chr1:146643495-146643496 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs587625608 |
chr1:146643502-146643503 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs1348316 |
chr1:146643555-146643556 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
7 |
rs200528120 |
chr1:146643571-146643572 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs34838459 |
chr1:146643580-146643581 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
9 |
rs587670454 |
chr1:146643612-146643613 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs587721866 |
chr1:146643628-146643629 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs34612362 |
chr1:146643633-146643634 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs587635949 |
chr1:146643642-146643643 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs587669301 |
chr1:146643655-146643656 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs369329867 |
chr1:146643672-146643673 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs587748890 |
chr1:146643697-146643698 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs377515798 |
chr1:146643754-146643755 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs149416365 |
chr1:146643789-146643790 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs587700287 |
chr1:146643823-146643824 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs112202593 |
chr1:146643833-146643834 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs587733229 |
chr1:146643851-146643852 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs375121064 |
chr1:146643863-146643864 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs12724706 |
chr1:146643882-146643883 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
9 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs587623092 |
chr1:146643924-146643925 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs188569139 |
chr1:146643935-146643936 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs587748690 |
chr1:146643957-146643958 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs587652270 |
chr1:146643984-146643985 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs587705217 |
chr1:146643991-146643992 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs72708506 |
chr1:146644053-146644054 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs181405788 |
chr1:146644093-146644094 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs587737837 |
chr1:146644161-146644162 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs587594294 |
chr1:146644171-146644172 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs115179956 |
chr1:146644199-146644200 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
33 |
rs373168792 |
chr1:146644228-146644229 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs587714736 |
chr1:146644261-146644262 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs376686976 |
chr1:146644262-146644263 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs587607173 |
chr1:146644267-146644268 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs587669153 |
chr1:146644330-146644331 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs587747275 |
chr1:146644337-146644338 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs587603270 |
chr1:146644379-146644380 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs57247303 |
chr1:146644421-146644422 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
41 |
rs74119889 |
chr1:146644480-146644481 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs12088857 |
chr1:146644481-146644482 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
13 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
43 |
rs587693194 |
chr1:146644504-146644505 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs371377214 |
chr1:146644510-146644511 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs587731157 |
chr1:146644512-146644513 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs111517497 |
chr1:146644517-146644518 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs587703267 |
chr1:146644519-146644520 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs185935537 |
chr1:146644525-146644526 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs587656198 |
chr1:146644599-146644600 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs587692194 |
chr1:146644604-146644605 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|