Variant report

Variant nsv817336
Chromosome Location chr7:48238233-48563988
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:955 , 50 per page) page: 1 2 3 4 5 6 7 ... 20
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:48223200-48240400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr7:48230600-48246200 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr7:48240200-48240400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
4 chr7:48240200-48240800 Enhancers Fetal Intestine Large intestine
5 chr7:48240200-48240800 Enhancers Fetal Intestine Small intestine
6 chr7:48240200-48244200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr7:48240400-48241000 Active TSS iPS-15b Cell Line embryonic stem cell
8 chr7:48240400-48241200 Enhancers iPS-18 Cell Line embryonic stem cell
9 chr7:48240400-48241200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr7:48240400-48241400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr7:48240400-48241400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr7:48240400-48241800 Enhancers Stomach Mucosa stomach
13 chr7:48240600-48241200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr7:48240800-48241000 Active TSS Fetal Intestine Small intestine
15 chr7:48240800-48241200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr7:48240800-48241200 Flanking Active TSS Fetal Intestine Large intestine
17 chr7:48240800-48241200 Active TSS Rectal Mucosa Donor 29 rectum
18 chr7:48240800-48241200 Active TSS Rectal Smooth Muscle rectum
19 chr7:48240800-48241400 Active TSS Duodenum Mucosa Duodenum
20 chr7:48240800-48241600 Enhancers K562 blood
21 chr7:48240800-48241800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr7:48241000-48241200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
23 chr7:48241000-48241200 Flanking Active TSS Fetal Intestine Small intestine
24 chr7:48241200-48241600 Enhancers Fetal Intestine Large intestine
25 chr7:48241400-48243200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr7:48244200-48244600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr7:48246200-48247200 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr7:48246400-48247400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr7:48247200-48248600 Enhancers Primary neutrophils fromperipheralblood blood
30 chr7:48248600-48250600 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr7:48248600-48251200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr7:48250600-48251000 Enhancers Primary neutrophils fromperipheralblood blood
33 chr7:48251000-48252000 Genic enhancers Primary neutrophils fromperipheralblood blood
34 chr7:48251200-48252000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:48252000-48253000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr7:48252000-48253400 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr7:48253000-48253400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr7:48253000-48253400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr7:48253400-48278200 Strong transcription Primary neutrophils fromperipheralblood blood
40 chr7:48256800-48257200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr7:48257200-48257600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr7:48274000-48274200 Bivalent Enhancer Aorta Aorta
43 chr7:48275400-48278000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr7:48277600-48290400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr7:48278200-48278600 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr7:48278600-48279000 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr7:48278800-48279200 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr7:48279000-48279800 Genic enhancers Primary neutrophils fromperipheralblood blood
49 chr7:48279200-48279400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr7:48279400-48280400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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