No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs188051396 |
chr22:29998516-29998517 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs572480137 |
chr22:29998639-29998640 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs542775628 |
chr22:29998667-29998668 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs571330743 |
chr22:29998711-29998712 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs148459689 |
chr22:29998820-29998821 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs60091951 |
chr22:29998830-29998831 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs142608565 |
chr22:29998833-29998834 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs565169860 |
chr22:29998852-29998853 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs532484321 |
chr22:29998863-29998864 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs185174462 |
chr22:29998865-29998866 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs565761453 |
chr22:29998870-29998871 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs190365260 |
chr22:29998891-29998892 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs533201506 |
chr22:29998913-29998914 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs569264303 |
chr22:29998926-29998927 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs536644603 |
chr22:29998956-29998957 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs113869485 |
chr22:29998965-29998966 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs182551418 |
chr22:29998972-29998973 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs577898203 |
chr22:29998975-29998976 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs554057011 |
chr22:29998977-29998978 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs111546722 |
chr22:29998983-29998984 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs186575833 |
chr22:29998998-29998999 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs368745480 |
chr22:29999057-29999058 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs147596838 |
chr22:29999066-29999067 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs549757204 |
chr22:29999074-29999075 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs9625839 |
chr22:29999088-29999089 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs9614001 |
chr22:29999108-29999109 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs543067023 |
chr22:29999188-29999189 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs142062896 |
chr22:29999206-29999207 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs1800538 |
chr22:29999236-29999237 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
30 |
rs144246747 |
chr22:29999242-29999243 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs11090574 |
chr22:29999309-29999310 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs59243127 |
chr22:29999340-29999341 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs559560319 |
chr22:29999344-29999345 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs397832686 |
chr22:29999345-29999346 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs541678066 |
chr22:29999349-29999350 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs57056994 |
chr22:29999350-29999351 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs112049943 |
chr22:29999358-29999359 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs559461077 |
chr22:29999387-29999388 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs140062784 |
chr22:29999413-29999414 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs529863911 |
chr22:29999428-29999429 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs552077586 |
chr22:29999458-29999459 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs569400926 |
chr22:29999493-29999494 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs530551700 |
chr22:29999499-29999500 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs112995186 |
chr22:29999518-29999519 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs551731219 |
chr22:29999523-29999524 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs570135699 |
chr22:29999584-29999585 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs539283977 |
chr22:29999599-29999600 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs571842282 |
chr22:29999647-29999648 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs554177413 |
chr22:29999658-29999659 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs56733822 |
chr22:29999742-29999743 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|