Variant report

Variant	nsv817819
Chromosome Location	chr19:19009470-19022204
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:427)
CpG islands
(count:61)
Chromatin interactive
region (count:21)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr19:19016178-19016557	K562	blood:	n/a	n/a
2	BHLHE40	chr19:19008984-19009760	K562	blood:	n/a	n/a
3	BRCA1	chr19:19009826-19009852	HepG2	liver:	n/a	n/a
4	CBX3	chr19:19012165-19012544	K562	blood:	n/a	n/a
5	CCNT2	chr19:19018221-19018397	K562	blood:	n/a	n/a
6	CCNT2	chr19:19008993-19009788	K562	blood:	n/a	chr19:19009465-19009474
7	CEBPD	chr19:19009297-19009827	K562	blood:	n/a	n/a
8	CEBPD	chr19:19009301-19009848	K562	blood:	n/a	n/a
9	CTCF	chr19:19014024-19014137	Hela-S3	cervix:	n/a	n/a
10	CTCF	chr19:19014017-19014165	H1-hESC	embryonic stem cell:	n/a	n/a
11	CTCF	chr19:19009880-19010030	K562	blood:	n/a	chr19:19010007-19010016
12	CTCF	chr19:19010581-19010651	GM19240	blood:	n/a	chr19:19010636-19010646
13	CTCF	chr19:19014020-19014170	Hela-S3	cervix:	n/a	n/a
14	CTCF	chr19:19010337-19010563	T-47D	breast:	n/a	n/a
15	CTCF	chr19:19014056-19014125	MCF-7	breast:	n/a	n/a
16	CTCF	chr19:19010586-19010656	GM12878	blood:	n/a	chr19:19010636-19010646
17	CTCF	chr19:19010597-19010645	GM12892	blood:	n/a	n/a
18	CTCF	chr19:19014000-19014150	WERI-Rb-1	eye:	n/a	n/a
19	CTCF	chr19:19010572-19010714	H1-hESC	embryonic stem cell:	n/a	chr19:19010636-19010646
20	CTCF	chr19:19010600-19010750	GM12865	blood:	n/a	chr19:19010636-19010646
21	CTCF	chr19:19010567-19010688	MCF-7	breast:	n/a	chr19:19010636-19010646
22	CTCF	chr19:19010592-19010661	MCF-7	breast:	n/a	chr19:19010636-19010646
23	CTCF	chr19:19010640-19010680	GM12891	blood:	n/a	n/a
24	CTCF	chr19:19013960-19014110	SK-N-SH_RA	brain:	n/a	n/a
25	CTCF	chr19:19014000-19014150	AG04449	skin:	n/a	n/a
26	CTCF	chr19:19010540-19010690	WERI-Rb-1	eye:	n/a	chr19:19010636-19010646
27	CTCF	chr19:19010489-19010707	HepG2	liver:	n/a	chr19:19010636-19010646
28	CTCF	chr19:19010580-19010707	K562	blood:	n/a	chr19:19010636-19010646
29	CTCF	chr19:19014020-19014170	GM12874	blood:	n/a	n/a
30	CTCF	chr19:19010567-19010681	GM19239	blood:	n/a	chr19:19010636-19010646
31	CTCF	chr19:19010588-19010672	K562	blood:	n/a	chr19:19010636-19010646
32	CTCF	chr19:19010640-19010790	HEK293	kidney:	n/a	n/a
33	CTCF	chr19:19010553-19010716	MCF-7	breast:	n/a	chr19:19010636-19010646
34	CTCF	chr19:19010000-19010150	HEK293	kidney:	n/a	chr19:19010007-19010016
35	CTCF	chr19:19010579-19010674	Hela-S3	cervix:	n/a	chr19:19010636-19010646
36	CTCF	chr19:19013940-19014090	HBMEC	blood vessel:	n/a	n/a
37	CTCF	chr19:19010682-19010685	GM19239	blood:	n/a	n/a
38	CTCF	chr19:19017718-19017954	T-47D	breast:	n/a	n/a
39	CTCFL	chr19:19013981-19014179	K562	blood:	n/a	n/a
40	CTCFL	chr19:19014022-19014213	K562	blood:	n/a	n/a
41	EGR1	chr19:19016317-19016560	K562	blood:	n/a	chr19:19016450-19016463 chr19:19016449-19016464 chr19:19016450-19016463
42	EGR1	chr19:19016377-19016530	K562	blood:	n/a	chr19:19016450-19016463 chr19:19016449-19016464 chr19:19016450-19016463
43	ELF1	chr19:19013955-19014197	K562	blood:	n/a	n/a
44	EP300	chr19:19009456-19009745	HepG2	liver:	n/a	n/a
45	EP300	chr19:19009110-19009679	K562	blood:	n/a	n/a
46	GATA1	chr19:19008888-19009932	K562	blood:	n/a	chr19:19009565-19009582 chr19:19009574-19009583 chr19:19009558-19009565 chr19:19009558-19009567 chr19:19009558-19009565 chr19:19009558-19009565 chr19:19009576-19009586
47	GATA2	chr19:19020632-19020910	HUVEC	blood vessel:	n/a	chr19:19020823-19020830
48	GATA2	chr19:19009033-19009774	SH-SY5Y	brain:	n/a	chr19:19009565-19009582 chr19:19009574-19009583 chr19:19009558-19009565 chr19:19009558-19009567 chr19:19009558-19009565 chr19:19009558-19009565 chr19:19009576-19009586
49	HDAC2	chr19:19009425-19009735	HepG2	liver:	n/a	chr19:19009575-19009584
50	HDAC2	chr19:19009519-19009728	K562	blood:	n/a	chr19:19009575-19009584

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:19011222-19011272	Jurkat	blood:	n/a
2	chr19:19011222-19011272	H1-hESC	embryonic stem cell:	embryo
3	chr19:19011222-19011272	HepG2	liver:	n/a
4	chr19:19011222-19011272	NH-A	brain:	n/a
5	chr19:19011222-19011272	PANC-1	pancreas:	n/a
6	chr19:19011222-19011272	PFSK-1	brain:	n/a
7	chr19:19011222-19011272	GM12891	blood:	n/a
8	chr19:19011222-19011272	HRE	kidney:	n/a
9	chr19:19011222-19011272	SAEC	small airway:	n/a
10	chr19:19011222-19011272	HMEC	breast:	n/a
11	chr19:19011222-19011272	HPAEpiC	pulmonary alveolar:	n/a
12	chr19:19011222-19011272	BJ	skin:	n/a
13	chr19:19011222-19011272	ovcar-3	ovarian:	n/a
14	chr19:19011222-19011272	HIPEpiC	eye:	n/a
15	chr19:19011222-19011272	U87	brain:	n/a
16	chr19:19011222-19011272	LNCaP	prostate:	n/a
17	chr19:19011222-19011272	SK-N-MC	brain:	n/a
18	chr19:19011222-19011272	RPTEC	kidney:	n/a
19	chr19:19011222-19011272	K562	blood:	n/a
20	chr19:19011222-19011272	NHBE	bronchial:	n/a
21	chr19:19011222-19011272	ProgFib	skin:	n/a
22	chr19:19011222-19011272	SKMC	muscle:	n/a
23	chr19:19011222-19011272	GM19239	blood:	n/a
24	chr19:19011222-19011272	T-47D	breast:	n/a
25	chr19:19011222-19011272	NHDF-neo	bronchial:	n/a
26	chr19:19011222-19011272	MCF-7	breast:	n/a
27	chr19:19011222-19011272	HCPEpiC	choroid plexus:	n/a
28	chr19:19011222-19011272	IMR90	lung:	fetal
29	chr19:19011222-19011272	HUVEC	blood vessel:	n/a
30	chr19:19011222-19011272	BE2_C	brain:	n/a
31	chr19:19011222-19011272	GM12878	blood:	n/a
32	chr19:19011222-19011272	GM12892	blood:	n/a
33	chr19:19011222-19011272	AG04449	skin:	fetal
34	chr19:19011222-19011272	GM06990	blood:	n/a
35	chr19:19011222-19011272	Hepatocyte	liver:	n/a
36	chr19:19011222-19011272	AG10803	skin:	n/a
37	chr19:19011222-19011272	Hela-S3	cervix:	n/a
38	chr19:19011222-19011272	AG09309	skin:	n/a
39	chr19:19011222-19011272	HAEpiC	amniotic membrane:	n/a
40	chr19:19011222-19011272	HCM	heart:	n/a
41	chr19:19011222-19011272	A549	lung:	n/a
42	chr19:19011222-19011272	SK-N-SH	brain:	n/a
43	chr19:19011222-19011272	AG04450	lung:	fetal
44	chr19:19011222-19011272	AG09319	gingival:	n/a
45	chr19:19011222-19011272	HRCEpiC	kidney:	n/a
46	chr19:19011222-19011272	SK-N-SH_RA	brain:	n/a
47	chr19:19011222-19011272	HL-60	blood:	n/a
48	chr19:19011222-19011272	PrEC	prostate:	n/a
49	chr19:19011222-19011272	AoSMC	blood vessel:	n/a
50	chr19:19011222-19011272	MCF10A-Er-Src	breast:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:19017910..19020342-chr19:19048888..19050940,2	K562	blood:
2	chr19:19010164..19011980-chr19:19023732..19025454,3	MCF-7	breast:
3	chr19:19019766..19023523-chr19:19026658..19029850,3	K562	blood:
4	chr19:19008286..19009845-chr19:19027692..19029739,2	MCF-7	breast:
5	chr19:19020015..19022471-chr19:19027336..19031152,4	MCF-7	breast:
6	chr19:19005474..19008347-chr19:19018316..19020974,2	MCF-7	breast:
7	chr19:19020576..19023237-chr19:19030624..19034150,4	K562	blood:
8	chr19:19014514..19025012-chr19:19028545..19031608,12	MCF-7	breast:
9	chr19:19014193..19017050-chr19:19024661..19026819,2	K562	blood:
10	chr19:19003756..19013137-chr19:19015458..19020402,12	K562	blood:
11	chr19:19010887..19011711-chr6:30711759..30712351,2	Hela-S3	cervix:
12	chr19:19010579..19012422-chr19:19029682..19031277,2	K562	blood:
13	chr19:19019957..19022431-chr19:19024206..19026688,2	MCF-7	breast:
14	chr19:19008851..19010420-chr19:19035551..19037561,2	K562	blood:
15	chr19:19017449..19020202-chr19:19023767..19026462,3	K562	blood:
16	chr19:19014068..19015687-chr19:19028311..19030250,2	K562	blood:
17	chr19:19008209..19011706-chr19:19016535..19019797,4	MCF-7	breast:
18	chr19:19015729..19017809-chr19:19036062..19038418,2	K562	blood:
19	chr19:19017980..19019625-chr19:19028606..19030328,2	K562	blood:
20	chr19:18993425..18995899-chr19:19009767..19011976,2	K562	blood:
21	chr19:19009093..19010811-chr19:19050023..19052149,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-COPE-1	chr19:19010682-19010746	NONHSAT063001
2	lnc-COPE-1	chr19:19010323-19010518	NONHSAT063001
3	lnc-DDX49-1	chr19:19017011-19018999	ENSG00000248819
4	lnc-DDX49-1	chr19:19019595-19020282	ENSG00000248819

No data

Variant related genes	Relation type
GDF1	TF binding region
COPE	TF binding region
CERS1	TF binding region
GDF1	CpG island
COPE	CpG island
CERS1	CpG island
ENSG00000105669	chromatin interactions
ENSG00000051128	chromatin interactions
ENSG00000105671	chromatin interactions
ENSG00000223802	chromatin interactions
ENSG00000269019	chromatin interactions
ENSG00000137331	chromatin interactions
ENSG00000130283	chromatin interactions

Extended variants
information (count: 578 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:578 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs886853	chr19:19009470-19009471	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs186341547	chr19:19009475-19009476	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs190843591	chr19:19009477-19009478	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs527980722	chr19:19009507-19009508	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs116178996	chr19:19009553-19009554	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs567636751	chr19:19009601-19009602	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs183564911	chr19:19009608-19009609	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs188656462	chr19:19009627-19009628	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs549637104	chr19:19009651-19009652	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs569762042	chr19:19009673-19009674	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs571421003	chr19:19009723-19009724	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs191354212	chr19:19009739-19009740	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs544355405	chr19:19009772-19009773	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs113626487	chr19:19009776-19009777	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs565854141	chr19:19009798-19009799	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs3761084	chr19:19009825-19009826	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs554834387	chr19:19009827-19009828	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs573978793	chr19:19009837-19009838	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs536648626	chr19:19009851-19009852	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs556423794	chr19:19009861-19009862	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs183300990	chr19:19009899-19009900	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs377128360	chr19:19009911-19009912	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs545051171	chr19:19009930-19009931	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs569832646	chr19:19009941-19009942	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs565158800	chr19:19009956-19009957	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs572270122	chr19:19009976-19009977	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs59896304	chr19:19009986-19009987	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs541393104	chr19:19010014-19010015	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs561602579	chr19:19010033-19010034	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs536917305	chr19:19010037-19010038	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs55689008	chr19:19010045-19010046	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs111588960	chr19:19010082-19010083	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs558731805	chr19:19010083-19010084	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs549738447	chr19:19010111-19010112	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs369536223	chr19:19010145-19010146	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs201345544	chr19:19010180-19010181	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs563229923	chr19:19010230-19010231	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs532268797	chr19:19010285-19010286	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs559852624	chr19:19010289-19010290	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs566186549	chr19:19010293-19010294	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs186985911	chr19:19010299-19010300	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs565918834	chr19:19010339-19010340	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
43	rs534794917	chr19:19010361-19010362	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
44	rs561587835	chr19:19010378-19010379	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
45	rs1044823	chr19:19010394-19010395	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs376801368	chr19:19010446-19010447	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
47	rs370888761	chr19:19010462-19010463	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
48	rs149854108	chr19:19010494-19010495	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
49	rs377486646	chr19:19010503-19010504	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
50	rs199731661	chr19:19010541-19010542	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Follicular lymphoma	20505157	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	20179077	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Mycobacterial infection	18421352	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Liver carcinoma	19366792	CNVD
Colorectal cancer	19455253	CNVD
Lujan-Fryns syndrom	21521776	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Ependymoma	20639864	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:527 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:19006400-19011000	Weak transcription	Fetal Lung	lung
2	chr19:19006600-19010000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr19:19006600-19010000	Weak transcription	Gastric	stomach
4	chr19:19006600-19016000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr19:19006600-19027800	Weak transcription	NHDF-Ad	bronchial
6	chr19:19006600-19029000	Weak transcription	Fetal Kidney	kidney
7	chr19:19006800-19010000	Weak transcription	Left Ventricle	heart
8	chr19:19006800-19011200	Weak transcription	Primary B cells from cord blood	blood
9	chr19:19006800-19017800	Weak transcription	HUVEC	blood vessel
10	chr19:19007000-19010000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr19:19007000-19010000	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr19:19007000-19029000	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr19:19007400-19009600	Weak transcription	Liver	Liver
14	chr19:19007400-19025400	Weak transcription	NH-A	brain
15	chr19:19007400-19026000	Weak transcription	A549	lung
16	chr19:19007400-19027800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr19:19007600-19009600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr19:19007600-19009600	Enhancers	Fetal Muscle Leg	muscle
19	chr19:19007600-19009600	Weak transcription	Lung	lung
20	chr19:19007600-19009600	Weak transcription	GM12878-XiMat	blood
21	chr19:19007600-19009800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr19:19007600-19009800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr19:19007600-19009800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr19:19007600-19009800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr19:19007600-19010000	Weak transcription	Pancreas	Pancrea
26	chr19:19007600-19010400	Weak transcription	Ovary	ovary
27	chr19:19007600-19010800	Weak transcription	Primary hematopoietic stem cells	blood
28	chr19:19007600-19015400	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr19:19007600-19017000	Weak transcription	Brain Angular Gyrus	brain
30	chr19:19007600-19018200	Weak transcription	HSMM	muscle
31	chr19:19007600-19018600	Weak transcription	HMEC	breast
32	chr19:19007600-19028600	Weak transcription	Right Atrium	heart
33	chr19:19007800-19009600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr19:19007800-19009800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr19:19007800-19010200	Weak transcription	Brain Substantia Nigra	brain
36	chr19:19007800-19010200	Weak transcription	Osteobl	bone
37	chr19:19008000-19009600	Weak transcription	Fetal Brain Female	brain
38	chr19:19008000-19009800	Weak transcription	Primary T helper cells fromperipheralblood	blood
39	chr19:19008000-19009800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
40	chr19:19008000-19009800	Weak transcription	Dnd41	blood
41	chr19:19008000-19010000	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr19:19008000-19010000	Enhancers	Fetal Intestine Large	intestine
43	chr19:19008000-19010200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr19:19008000-19010600	Weak transcription	Brain Anterior Caudate	brain
45	chr19:19008000-19012400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr19:19008200-19009600	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr19:19008200-19009600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr19:19008200-19009600	Weak transcription	Brain Inferior Temporal Lobe	brain
49	chr19:19008200-19009600	Weak transcription	Esophagus	oesophagus
50	chr19:19008200-19009600	Enhancers	Fetal Muscle Trunk	muscle

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