No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs6006029 |
chr22:29540297-29540298 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs552351982 |
chr22:29540303-29540304 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs570634758 |
chr22:29540346-29540347 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs565433044 |
chr22:29540349-29540350 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs59762117 |
chr22:29540366-29540367 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs149693993 |
chr22:29540453-29540454 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs8141093 |
chr22:29540456-29540457 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs114710335 |
chr22:29540491-29540492 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs142508839 |
chr22:29540517-29540518 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs574948309 |
chr22:29540524-29540525 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs545504528 |
chr22:29540550-29540551 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs549353374 |
chr22:29540570-29540571 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs558695160 |
chr22:29540573-29540574 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs114127861 |
chr22:29540582-29540583 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs16987164 |
chr22:29540588-29540589 |
Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
16 |
rs376883591 |
chr22:29540638-29540639 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs371534321 |
chr22:29540647-29540648 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs5763004 |
chr22:29540649-29540650 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs545465916 |
chr22:29540703-29540704 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs530029817 |
chr22:29540704-29540705 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs144475295 |
chr22:29540708-29540709 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs563674110 |
chr22:29540731-29540732 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs17451302 |
chr22:29540742-29540743 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs552428396 |
chr22:29540744-29540745 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs114199238 |
chr22:29540759-29540760 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs373563943 |
chr22:29540760-29540761 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs528316511 |
chr22:29540900-29540901 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs546569263 |
chr22:29540917-29540918 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs132280 |
chr22:29540920-29540921 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
30 |
rs142508263 |
chr22:29540929-29540930 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs151123228 |
chr22:29540954-29540955 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs183097548 |
chr22:29540960-29540961 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs539121825 |
chr22:29540984-29540985 |
Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs115384160 |
chr22:29541043-29541044 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs577353298 |
chr22:29541074-29541075 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs111677053 |
chr22:29541105-29541106 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs553385852 |
chr22:29541106-29541107 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs16987166 |
chr22:29541134-29541135 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs542546244 |
chr22:29541143-29541144 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs547985188 |
chr22:29541239-29541240 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs563639866 |
chr22:29541256-29541257 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs530950330 |
chr22:29541268-29541269 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs186616475 |
chr22:29541298-29541299 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs564637975 |
chr22:29541361-29541362 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs78293984 |
chr22:29541378-29541379 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs546729127 |
chr22:29541396-29541397 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs527606493 |
chr22:29541425-29541426 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs5844838 |
chr22:29541426-29541427 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs568170848 |
chr22:29541429-29541430 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs529118647 |
chr22:29541441-29541442 |
Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|