No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs5940372 |
chrX:154737376-154737377 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs185683009 |
chrX:154737426-154737427 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs146839237 |
chrX:154737440-154737441 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs370020879 |
chrX:154737519-154737520 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs190642126 |
chrX:154737799-154737800 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs139776043 |
chrX:154737833-154737834 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs182881574 |
chrX:154738054-154738055 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs144493076 |
chrX:154738176-154738177 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs187951530 |
chrX:154738254-154738255 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs144914944 |
chrX:154738301-154738302 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs193044865 |
chrX:154738376-154738377 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs149032698 |
chrX:154738378-154738379 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs142036772 |
chrX:154738401-154738402 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs35317427 |
chrX:154738410-154738411 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs151171578 |
chrX:154738453-154738454 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs377320148 |
chrX:154738721-154738722 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs183971306 |
chrX:154738819-154738820 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs141192145 |
chrX:154738898-154738899 |
Weak transcription Strong transcription Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs187715182 |
chrX:154739002-154739003 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs192692173 |
chrX:154739028-154739029 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs989711 |
chrX:154739500-154739501 |
Weak transcription Strong transcription ZNF genes & repeats
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
22 |
rs184155727 |
chrX:154739719-154739720 |
Weak transcription Strong transcription ZNF genes & repeats
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs376124147 |
chrX:154739757-154739758 |
Weak transcription Strong transcription ZNF genes & repeats
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs188369069 |
chrX:154739791-154739792 |
Weak transcription Strong transcription ZNF genes & repeats
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs372008648 |
chrX:154739880-154739881 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs370981833 |
chrX:154739893-154739894 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs376914267 |
chrX:154739894-154739895 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs5940459 |
chrX:154739926-154739927 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs200117820 |
chrX:154739929-154739930 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs79920288 |
chrX:154740179-154740180 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
mRNA abundance
|
31 |
rs76536573 |
chrX:154740180-154740181 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs373222538 |
chrX:154740245-154740246 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs12928758 |
chrX:154740309-154740310 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs12378859 |
chrX:154740363-154740364 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs10007922 |
chrX:154740372-154740373 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs7055784 |
chrX:154740386-154740387 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs5940460 |
chrX:154740429-154740430 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs112972622 |
chrX:154740480-154740481 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs5940461 |
chrX:154740552-154740553 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs373813291 |
chrX:154740596-154740597 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs367623112 |
chrX:154740612-154740613 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs113785662 |
chrX:154740663-154740664 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs112229096 |
chrX:154740678-154740679 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs150163698 |
chrX:154740682-154740683 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs190732390 |
chrX:154740804-154740805 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs182239784 |
chrX:154740868-154740869 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs187337890 |
chrX:154740942-154740943 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs138177678 |
chrX:154740953-154740954 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs189349813 |
chrX:154740980-154740981 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs367747960 |
chrX:154740984-154740985 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|