Variant report

Variant	nsv818451
Chromosome Location	chr6:114597657-115471129
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2797)
CpG islands
(count:1708)
Chromatin interactive
region (count:81)
LncRNA
region (count:67)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:114719700-114720055	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:114697785-114698182	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:115069216-115069286	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:114622944-114623453	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:114664772-114664961	HepG2	liver:	n/a	n/a
6	ATF2	chr6:114684060-114684545	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr6:114742286-114742964	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr6:115310647-115311219	GM12878	blood:	n/a	n/a
9	ATF2	chr6:115036232-115036736	GM12878	blood:	n/a	n/a
10	ATF2	chr6:115036073-115036699	GM12878	blood:	n/a	n/a
11	ATF2	chr6:115034708-115035245	GM12878	blood:	n/a	n/a
12	ATF2	chr6:115310603-115311225	GM12878	blood:	n/a	n/a
13	ATF2	chr6:114662411-114662844	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr6:114725720-114726354	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr6:114742313-114742815	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr6:114740396-114740716	GM12878	blood:	n/a	n/a
17	ATF2	chr6:115318882-115319498	GM12878	blood:	n/a	n/a
18	ATF2	chr6:115034681-115035304	GM12878	blood:	n/a	n/a
19	ATF2	chr6:114740228-114740801	GM12878	blood:	n/a	n/a
20	ATF2	chr6:114684024-114684508	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr6:115318916-115319307	GM12878	blood:	n/a	n/a
22	ATF3	chr6:115104340-115104551	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr6:115370922-115371066	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr6:114682017-114682038	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr6:114648362-114648575	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr6:114663394-114664060	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr6:114664491-114665091	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr6:114648043-114648243	K562	blood:	n/a	n/a
29	BACH1	chr6:115104329-115104590	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr6:114684132-114684582	H1-hESC	embryonic stem cell:	n/a	n/a
31	BATF	chr6:115034743-115035142	GM12878	blood:	n/a	n/a
32	BATF	chr6:115310776-115311110	GM12878	blood:	n/a	n/a
33	BATF	chr6:115036267-115036600	GM12878	blood:	n/a	n/a
34	BATF	chr6:115318920-115319435	GM12878	blood:	n/a	n/a
35	BATF	chr6:114740282-114740635	GM12878	blood:	n/a	chr6:114740550-114740558
36	BATF	chr6:115322942-115323327	GM12878	blood:	n/a	chr6:115323148-115323159
37	BATF	chr6:115034676-115035181	GM12878	blood:	n/a	n/a
38	BATF	chr6:114634184-114634395	GM12878	blood:	n/a	n/a
39	BATF	chr6:115033324-115033673	GM12878	blood:	n/a	n/a
40	BATF	chr6:115322851-115323504	GM12878	blood:	n/a	chr6:115323148-115323159
41	BATF	chr6:114740453-114740646	GM12878	blood:	n/a	chr6:114740550-114740558
42	BATF	chr6:115036215-115036648	GM12878	blood:	n/a	n/a
43	BATF	chr6:115318922-115319346	GM12878	blood:	n/a	n/a
44	BCL11A	chr6:115036229-115036600	GM12878	blood:	n/a	chr6:115036446-115036455 chr6:115036259-115036266 chr6:115036468-115036477
45	BCL11A	chr6:115262342-115262520	H1-hESC	embryonic stem cell:	n/a	n/a
46	BCL11A	chr6:115385854-115386115	GM12878	blood:	n/a	n/a
47	BCL11A	chr6:115318968-115319208	GM12878	blood:	n/a	n/a
48	BCL11A	chr6:115310734-115311115	GM12878	blood:	n/a	n/a
49	BCL11A	chr6:115034824-115035197	GM12878	blood:	n/a	n/a
50	BCL11A	chr6:114740306-114740650	GM12878	blood:	n/a	chr6:114740537-114740546

(count:1708 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:115186624-115186674	CMK	blood:	n/a
2	chr6:114618460-114618510	NT2-D1	testis:	n/a
3	chr6:114891274-114891324	AG04450	lung:	fetal
4	chr6:115186908-115186958	SKMC	muscle:	n/a
5	chr6:114815726-114815776	SKMC	muscle:	n/a
6	chr6:114741679-114741729	ovcar-3	ovarian:	n/a
7	chr6:114664754-114664804	HIPEpiC	eye:	n/a
8	chr6:114844832-114844882	HMEC	breast:	n/a
9	chr6:114663139-114663189	AG04450	lung:	fetal
10	chr6:114707054-114707104	HRE	kidney:	n/a
11	chr6:115186908-115186958	SK-N-MC	brain:	n/a
12	chr6:115186624-115186674	HCM	heart:	n/a
13	chr6:114751873-114751923	MCF10A-Er-Src	breast:	n/a
14	chr6:114663139-114663189	HCT-116	colon:	n/a
15	chr6:114898257-114898307	HCPEpiC	choroid plexus:	n/a
16	chr6:114741679-114741729	GM12878	blood:	n/a
17	chr6:114751873-114751923	HCF	heart:	n/a
18	chr6:114662739-114662789	GM12878	blood:	n/a
19	chr6:115186624-115186674	AG10803	skin:	n/a
20	chr6:114697971-114698021	CMK	blood:	n/a
21	chr6:114661277-114661327	AG04449	skin:	fetal
22	chr6:114898257-114898307	ProgFib	skin:	n/a
23	chr6:114725242-114725292	HepG2	liver:	n/a
24	chr6:114663692-114663742	ProgFib	skin:	n/a
25	chr6:114751873-114751923	HL-60	blood:	n/a
26	chr6:114662458-114662508	NT2-D1	testis:	n/a
27	chr6:114663564-114663614	H1-hESC	embryonic stem cell:	embryo
28	chr6:114663139-114663189	HAEpiC	amniotic membrane:	n/a
29	chr6:114664754-114664804	HNPCEpiC	eye:	n/a
30	chr6:114644187-114644237	NH-A	brain:	n/a
31	chr6:114618460-114618510	SK-N-MC	brain:	n/a
32	chr6:114707054-114707104	HRCEpiC	kidney:	n/a
33	chr6:114891274-114891324	BE2_C	brain:	n/a
34	chr6:114663692-114663742	HL-60	blood:	n/a
35	chr6:114661277-114661327	HL-60	blood:	n/a
36	chr6:114650610-114650660	HMEC	breast:	n/a
37	chr6:114662458-114662508	HL-60	blood:	n/a
38	chr6:114663570-114663620	HUVEC	blood vessel:	n/a
39	chr6:114644187-114644237	H1-hESC	embryonic stem cell:	embryo
40	chr6:114662739-114662789	PFSK-1	brain:	n/a
41	chr6:114664843-114664893	AG09309	skin:	n/a
42	chr6:114751873-114751923	T-47D	breast:	n/a
43	chr6:114662697-114662747	AG09309	skin:	n/a
44	chr6:114891274-114891324	HepG2	liver:	n/a
45	chr6:114663564-114663614	HPAEpiC	pulmonary alveolar:	n/a
46	chr6:114741679-114741729	MCF10A-Er-Src	breast:	n/a
47	chr6:114665013-114665063	U87	brain:	n/a
48	chr6:114662739-114662789	HPAEpiC	pulmonary alveolar:	n/a
49	chr6:114898257-114898307	NHDF-neo	bronchial:	n/a
50	chr6:114844832-114844882	Jurkat	blood:	n/a

(count:81 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:115156152..115158864-chr6:115162515..115164962,2	K562	blood:
2	chr6:114662119..114667220-chr6:114669334..114673077,6	MCF-7	breast:
3	chr6:115464259..115466122-chr6:115467900..115470572,2	K562	blood:
4	chr6:114663102..114665559-chr6:115006169..115008333,2	MCF-7	breast:
5	chr6:114662992..114664998-chr6:114748035..114750370,2	MCF-7	breast:
6	chr20:52825165..52826866-chr6:115066329..115069326,2	MCF-7	breast:
7	chr6:115069108..115069650-chr6:116217423..116218405,2	MCF-7	breast:
8	chr6:114983151..114986089-chr6:114986914..114989213,2	K562	blood:
9	chr6:114919212..114921990-chr6:114922812..114925771,2	K562	blood:
10	chr6:114663101..114665339-chr6:114863866..114866852,2	MCF-7	breast:
11	chr6:114810855..114812867-chr6:114817060..114819585,2	K562	blood:
12	chr6:114662119..114667220-chr6:114669334..114673077,6	MCF-7	breast:
13	chr6:115140903..115143302-chr6:115155518..115157030,2	MCF-7	breast:
14	chr6:115022160..115024692-chr6:115025549..115027763,2	K562	blood:
15	chr6:114716541..114719212-chr6:114721790..114724337,2	MCF-7	breast:
16	chr6:114942645..114945445-chr6:114947272..114949668,2	K562	blood:
17	chr6:114649750..114652393-chr6:114660121..114661764,2	MCF-7	breast:
18	chr6:115024513..115027327-chr6:115031365..115032903,2	MCF-7	breast:
19	chr6:114655643..114657954-chr6:114659786..114662441,2	MCF-7	breast:
20	chr6:114684479..114687440-chr6:114692233..114694827,2	MCF-7	breast:
21	chr6:114417733..114418278-chr6:114664810..114665478,2	MCF-7	breast:
22	chr6:114699357..114700992-chr6:114703215..114705730,2	K562	blood:
23	chr6:114937519..114939920-chr6:114943171..114945017,2	MCF-7	breast:
24	chr6:115465579..115468359-chr6:115468931..115471034,2	MCF-7	breast:
25	chr6:115456456..115458664-chr6:115462718..115465273,2	K562	blood:
26	chr6:114716541..114719212-chr6:114721790..114724337,2	MCF-7	breast:
27	chr6:114942645..114945445-chr6:114947272..114949668,2	K562	blood:
28	chr6:115425618..115427321-chr6:115430585..115433351,2	K562	blood:
29	chr6:114886429..114888208-chr6:114888980..114890992,2	MCF-7	breast:
30	chr6:114983151..114986089-chr6:114986914..114989213,2	K562	blood:
31	chr6:114886429..114888208-chr6:114888980..114890992,2	MCF-7	breast:
32	chr6:114649750..114652393-chr6:114660121..114661764,2	MCF-7	breast:
33	chr6:115156152..115160135-chr6:115161236..115164962,3	K562	blood:
34	chr6:115022160..115024692-chr6:115025549..115027763,2	K562	blood:
35	chr6:114290761..114292353-chr6:114629817..114632002,2	MCF-7	breast:
36	chr6:114653028..114655061-chr6:114658099..114660721,2	MCF-7	breast:
37	chr6:114655643..114657954-chr6:114659786..114662441,2	MCF-7	breast:
38	chr6:115071084..115073311-chr6:115074657..115076338,2	K562	blood:
39	chr6:115156152..115160135-chr6:115161236..115164962,3	K562	blood:
40	chr2:35359597..35360193-chr6:115017299..115018148,2	MCF-7	breast:
41	chr6:115069181..115071252-chr6:115081748..115083641,2	MCF-7	breast:
42	chr6:115199965..115201575-chr6:115207287..115210260,2	MCF-7	breast:
43	chr6:115286566..115289253-chr6:115300966..115302746,2	K562	blood:
44	chr6:114653028..114655061-chr6:114658099..114660721,2	MCF-7	breast:
45	chr6:114290903..114293553-chr6:114664243..114666092,2	MCF-7	breast:
46	chr6:114937519..114939920-chr6:114943171..114945017,2	MCF-7	breast:
47	chr6:114490498..114491435-chr6:114625509..114626136,2	MCF-7	breast:
48	chr6:115071084..115073311-chr6:115074657..115076338,2	K562	blood:
49	chr6:114398386..114401210-chr6:114639151..114641476,2	MCF-7	breast:
50	chr6:115367123..115369698-chr6:115372430..115374297,2	K562	blood:

(count:67 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HS3ST5-2	chr6:114844615-114844856	XLOC_005813
2	lnc-NT5DC1-4	chr6:115322754-115323156	XLOC_005442
3	lnc-HS3ST5-1	chr6:114809752-114809845	XLOC_005812
4	lnc-MARCKS-5	chr6:114777021-114777853	NONHSAT114614
5	lnc-HS3ST5-1	chr6:114809752-114809916	XLOC_005812
6	lnc-HS3ST5-1	chr6:114798514-114798670	XLOC_005812
7	lnc-NT5DC1-4	chr6:115319220-115319583	NONHSAT114627
8	lnc-MARCKS-5	chr6:114661686-114661902	ENSG00000228624
9	lnc-MARCKS-19	chr6:114834500-114840824	l_3241_chr6:114823058-114843229_76bGuttman_hES
10	lnc-MARCKS-5	chr6:114789659-114789738	ENSG00000228624
11	lnc-HS3ST5-2	chr6:114864957-114865085	XLOC_005813
12	lnc-MARCKS-5	chr6:114790310-114790463	ENSG00000228624
13	lnc-MARCKS-5	chr6:114777021-114777798	ENSG00000228624
14	lnc-MARCKS-19	chr6:114823059-114823138	l_3241_chr6:114823058-114843229_76bGuttman_hES
15	lnc-HS3ST5-8	chr6:114916445-114916538	NONHSAT114622
16	lnc-HS3ST5-2	chr6:114844608-114844856	XLOC_005813
17	lnc-NT5DC1-4	chr6:115322753-115323447	NONHSAT114627
18	lnc-MARCKS-5	chr6:114792579-114792869	ENSG00000228624
19	lnc-HS3ST5-7	chr6:114744178-114745122	NONHSAT114610
20	lnc-HS3ST5-3	chr6:114670647-114671812	NONHSAT114609
21	lnc-MARCKS-5	chr6:114775079-114775243	XLOC_005441
22	lnc-MARCKS-5	chr6:114770131-114770195	ENSG00000228624
23	lnc-HS3ST5-9	chr6:114971650-114971778	l_3243_chr6:114951300-114973176_testes
24	lnc-MARCKS-5	chr6:114602976-114603172	ENSG00000228624
25	lnc-HS3ST5-2	chr6:114866408-114866452	NONHSAT114621
26	lnc-HS3ST5-9	chr6:114951301-114951426	l_3243_chr6:114951300-114973176_testes
27	lnc-MARCKS-5	chr6:114663487-114663628	NONHSAT114607
28	lnc-MARCKS-5	chr6:114770124-114770195	ENSG00000228624
29	lnc-HS3ST5-2	chr6:114856880-114857039	XLOC_005813
30	lnc-MARCKS-5	chr6:114770080-114770195	NONHSAT114614
31	lnc-MARCKS-5	chr6:114657998-114658203	NONHSAT114607
32	lnc-HS3ST5-2	chr6:114866408-114866483	XLOC_005813
33	lnc-MARCKS-5	chr6:114661686-114661779	ENSG00000228624
34	lnc-MARCKS-19	chr6:114840834-114843229	l_3241_chr6:114823058-114843229_76bGuttman_hES
35	lnc-HS3ST5-2	chr6:114866407-114866483	NONHSAT114618
36	lnc-MARCKS-5	chr6:114692756-114692850	NONHSAT114608
37	lnc-MARCKS-5	chr6:114770131-114770195	ENSG00000228624
38	lnc-HS3ST5-7	chr6:114776942-114777358	NONHSAT114610
39	lnc-HS3ST5-2	chr6:114866408-114866452	NONHSAT114617
40	lnc-HS3ST5-9	chr6:114951429-114951549	l_3243_chr6:114951300-114973176_testes
41	lnc-HS3ST5-8	chr6:114909282-114909902	NONHSAT114623
42	lnc-HS3ST5-9	chr6:114963573-114963732	NONHSAT114624
43	lnc-HS3ST5-7	chr6:114730053-114731474	NONHSAT114610
44	lnc-MARCKS-5	chr6:114759133-114759230	ENSG00000228624
45	lnc-HS3ST5-2	chr6:114844607-114844856	NONHSAT114618
46	lnc-MARCKS-5	chr6:114736744-114736776	XLOC_005441
47	lnc-HS3ST5-9	chr6:114951308-114951549	NONHSAT114624
48	lnc-MARCKS-5	chr6:114770131-114770195	XLOC_005441
49	lnc-MARCKS-5	chr6:114736766-114736776	XLOC_005441
50	lnc-MARCKS-5	chr6:114727807-114727832	ENSG00000228624

No data

Variant related genes	Relation type
ENSG00000228624	TF binding region
DNAJA1P4	TF binding region
RNU6-475P	TF binding region
ENSG00000232395	TF binding region
ENSG00000221599	TF binding region
HS3ST5	TF binding region
ENSG00000226079	TF binding region
ENSG00000228624	CpG island
DNAJA1P4	CpG island
RNU6-475P	CpG island
ENSG00000232395	CpG island
ENSG00000221599	CpG island
HS3ST5	CpG island
ENSG00000226079	CpG island
ENSG00000249853	chromatin interactions
ENSG00000218089	chromatin interactions
ENSG00000196591	chromatin interactions
ENSG00000228624	chromatin interactions
YARS2	miRNA target sites
THBS1	miRNA target sites
WWC2	miRNA target sites
HN1L	miRNA target sites
HMGN2	miRNA target sites
UBE2D3	miRNA target sites
NTRK3	miRNA target sites
AHNAK2	miRNA target sites
ZC3HAV1	miRNA target sites
MXI1	miRNA target sites
ARPP19	miRNA target sites
CHRAC1	miRNA target sites
TMEM41A	miRNA target sites
TP53	miRNA target sites
TLK1	miRNA target sites
ZNF638	miRNA target sites
MED28	miRNA target sites

Extended variants
information (count: 15370 )
Associated
traits (count: 128 )

Variant overlapped rSNPs/rCNVs (count:15370 , 50 per page) page: 1 2 3 4 5 6 7 ... 308

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs785126	chr6:114597657-114597658	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs575324883	chr6:114597687-114597688	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs545850921	chr6:114597700-114597701	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs557833193	chr6:114597712-114597713	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs201519609	chr6:114597775-114597776	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs145697582	chr6:114597782-114597783	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs397820873	chr6:114597786-114597787	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs377461441	chr6:114597787-114597788	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs572875404	chr6:114597840-114597841	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs188305270	chr6:114597885-114597886	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs191667803	chr6:114597921-114597922	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs575653492	chr6:114598001-114598002	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs72956220	chr6:114598058-114598059	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs370204367	chr6:114598064-114598065	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs529974772	chr6:114598073-114598074	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs117617085	chr6:114598091-114598092	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs564339369	chr6:114598103-114598104	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs17076012	chr6:114598114-114598115	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs552270922	chr6:114598178-114598179	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs183880759	chr6:114598189-114598190	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs116880770	chr6:114598210-114598211	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs541668811	chr6:114598306-114598307	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs796768	chr6:114598314-114598315	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs118094220	chr6:114598330-114598331	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs375990080	chr6:114598379-114598380	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs529236960	chr6:114598380-114598381	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs535812314	chr6:114598489-114598490	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs368347896	chr6:114598500-114598501	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs186910826	chr6:114598550-114598551	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs191377172	chr6:114598554-114598555	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs539667070	chr6:114598623-114598624	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs557798136	chr6:114598628-114598629	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs72956225	chr6:114598672-114598673	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs529434347	chr6:114598692-114598693	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs555527414	chr6:114598710-114598711	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs7453897	chr6:114598726-114598727	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs554972282	chr6:114598729-114598730	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs114484881	chr6:114598764-114598765	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs563349222	chr6:114598796-114598797	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs541721549	chr6:114598872-114598873	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs530541179	chr6:114598908-114598909	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs12665133	chr6:114598929-114598930	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs55789587	chr6:114598941-114598942	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs570334972	chr6:114598966-114598967	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs185836029	chr6:114598978-114598979	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs1337328	chr6:114598993-114598994	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs190361678	chr6:114599002-114599003	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs546565389	chr6:114599024-114599025	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs561485255	chr6:114599025-114599026	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs528884507	chr6:114599037-114599038	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:128)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Burkitt''s lymphoma	18698080	CNVD
Ovarian cancer	21720365	CNVD
Basal cell lymphoma	17170743	CNVD
Prostate cancer	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16461572	CNVD
Neurocytoma	17123091	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Chordoma	21602918	CNVD
Kartagener syndrome	16639409	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Systemic lupus erythematosus	19220326	CNVD
Cancer	17160897	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Acute lymphoblastic leukemia	17229543	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Follicular lymphoma	18703704	CNVD
Mental retardation	17621639	CNVD
Hypoplastic	20877625	CNVD
Hypotonia	20877625	CNVD
Mental retardation	20877625	CNVD
Microcephaly	20877625	CNVD
brachycephaly	20877625	CNVD
epicanthic folds	20877625	CNVD
micrognathia	20877625	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Salivary gland tumor	18059337	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Metastatic melanoma	18483359	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Acute myeloid leukemia	19651600	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Cancer	20164919	CNVD

Chromatin state (count:2057 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114577000-114603000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr6:114591400-114602600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:114594400-114598200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr6:114596200-114598000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr6:114596200-114608400	Weak transcription	HepG2	liver
6	chr6:114596800-114600200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr6:114598000-114598200	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr6:114598000-114599000	Enhancers	Hela-S3	cervix
9	chr6:114598000-114599200	Enhancers	Brain Angular Gyrus	brain
10	chr6:114598000-114600200	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr6:114598000-114600400	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr6:114598000-114600400	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr6:114598000-114600400	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr6:114598000-114605200	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr6:114598200-114599200	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr6:114598800-114599600	Enhancers	Brain Anterior Caudate	brain
17	chr6:114598800-114600000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr6:114599000-114599600	Enhancers	Brain Hippocampus Middle	brain
19	chr6:114599000-114600200	Enhancers	H1 Cell Line	embryonic stem cell
20	chr6:114599000-114600200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr6:114599200-114599600	Enhancers	H9 Cell Line	embryonic stem cell
22	chr6:114599200-114599600	Enhancers	Brain Inferior Temporal Lobe	brain
23	chr6:114599200-114599600	Enhancers	Brain Substantia Nigra	brain
24	chr6:114599200-114600200	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr6:114599200-114602400	Weak transcription	Brain Angular Gyrus	brain
26	chr6:114599600-114600000	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr6:114599600-114600000	Weak transcription	Brain Anterior Caudate	brain
28	chr6:114599600-114600000	Weak transcription	Brain Hippocampus Middle	brain
29	chr6:114599600-114600000	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr6:114599600-114600000	Weak transcription	Brain Substantia Nigra	brain
31	chr6:114599800-114600000	Enhancers	Brain Cingulate Gyrus	brain
32	chr6:114600000-114600200	Enhancers	H9 Cell Line	embryonic stem cell
33	chr6:114600000-114600200	Enhancers	Brain Anterior Caudate	brain
34	chr6:114600000-114600200	Enhancers	Brain Hippocampus Middle	brain
35	chr6:114600000-114600200	Enhancers	Brain Inferior Temporal Lobe	brain
36	chr6:114600000-114600200	Enhancers	Brain Substantia Nigra	brain
37	chr6:114600000-114600200	Enhancers	Fetal Lung	lung
38	chr6:114600000-114602200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr6:114600000-114603000	Enhancers	Fetal Brain Male	brain
40	chr6:114600200-114600400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
41	chr6:114600200-114600600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr6:114600200-114601400	Weak transcription	HUES6 Cell Line	embryonic stem cell
43	chr6:114600200-114601400	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr6:114600200-114601600	Weak transcription	H1 Cell Line	embryonic stem cell
45	chr6:114600200-114601800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr6:114600200-114602000	Weak transcription	Brain Anterior Caudate	brain
47	chr6:114600200-114602000	Weak transcription	Brain Hippocampus Middle	brain
48	chr6:114600200-114602400	Weak transcription	Brain Substantia Nigra	brain
49	chr6:114600200-114602600	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr6:114600200-114602600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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