No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs1128446 |
chr12:104680842-104680843 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs569352081 |
chr12:104680867-104680868 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs546233353 |
chr12:104680878-104680879 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs536721926 |
chr12:104680879-104680880 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs112116484 |
chr12:104680888-104680889 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs562906326 |
chr12:104680920-104680921 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs200695049 |
chr12:104680945-104680946 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs531820550 |
chr12:104680947-104680948 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs181563220 |
chr12:104680950-104680951 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs376539514 |
chr12:104681007-104681008 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
20 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs568633006 |
chr12:104681028-104681029 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs77686585 |
chr12:104681038-104681039 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs202241198 |
chr12:104681082-104681083 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs374853838 |
chr12:104681087-104681088 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs185759255 |
chr12:104681099-104681100 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs372675671 |
chr12:104681137-104681138 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs200466846 |
chr12:104681144-104681145 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs190960236 |
chr12:104681147-104681148 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs397850471 |
chr12:104681159-104681160 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
19 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs539013722 |
chr12:104681178-104681179 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs555715762 |
chr12:104681192-104681193 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs183187189 |
chr12:104681209-104681210 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs535166458 |
chr12:104681210-104681211 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
18 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs567003350 |
chr12:104681259-104681260 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
17 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs186062313 |
chr12:104681300-104681301 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs372621666 |
chr12:104681352-104681353 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs149861298 |
chr12:104681366-104681367 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs540889046 |
chr12:104681372-104681373 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs534161650 |
chr12:104681415-104681416 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs7962942 |
chr12:104681428-104681429 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs577985994 |
chr12:104681440-104681441 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs543768958 |
chr12:104681496-104681497 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs562868063 |
chr12:104681556-104681557 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs576547781 |
chr12:104681577-104681578 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs577057188 |
chr12:104681621-104681622 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs542303195 |
chr12:104681634-104681635 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs562047703 |
chr12:104681659-104681660 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs527860442 |
chr12:104681676-104681677 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs547690932 |
chr12:104681712-104681713 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs537758940 |
chr12:104681742-104681743 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs191012591 |
chr12:104681751-104681752 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs377124456 |
chr12:104681759-104681760 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs533441022 |
chr12:104681763-104681764 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs574569790 |
chr12:104681764-104681765 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs569266264 |
chr12:104681772-104681773 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs535084892 |
chr12:104681887-104681888 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs549034571 |
chr12:104681931-104681932 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs183170885 |
chr12:104682018-104682019 |
Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs191456681 |
chr12:104682022-104682023 |
Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs12302458 |
chr12:104682041-104682042 |
Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|