The 2.0 version of rSNPBase

Variant report

Variant nsv819514
Chromosome Location chr1:220142005-220142128
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220129200-220145800 Weak transcription HepG2 liver
2 chr1:220132200-220144200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:220132400-220143200 Weak transcription Colonic Mucosa Colon
4 chr1:220132800-220177000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:220133600-220142200 Weak transcription Small Intestine intestine
6 chr1:220137200-220145800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:220137600-220142200 Weak transcription Primary B cells from cord blood blood
8 chr1:220138600-220143000 Weak transcription Ovary ovary
9 chr1:220139200-220145400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:220139400-220143600 Weak transcription NHEK skin
11 chr1:220139400-220146000 Weak transcription Colon Smooth Muscle Colon
12 chr1:220139400-220154000 Weak transcription Fetal Lung lung
13 chr1:220139600-220143600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:220139600-220144600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:220139800-220143600 Weak transcription Fetal Brain Female brain
16 chr1:220140000-220144400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:220140000-220146000 Weak transcription Psoas Muscle Psoas
18 chr1:220140000-220167400 Weak transcription Gastric stomach
19 chr1:220140200-220143200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr1:220140200-220151800 Weak transcription NHLF lung
21 chr1:220140200-220157600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:220140200-220160000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr1:220140400-220144200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:220140400-220146000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:220140400-220154200 Weak transcription Esophagus oesophagus
26 chr1:220140600-220142200 Weak transcription Hela-S3 cervix
27 chr1:220140600-220143400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:220140600-220143600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:220140600-220144600 Weak transcription A549 lung
30 chr1:220140600-220146000 Weak transcription Brain Angular Gyrus brain
31 chr1:220140600-220146200 Weak transcription Spleen Spleen
32 chr1:220140600-220162400 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr1:220140600-220162400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr1:220140600-220163000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:220140800-220142800 Strong transcription Primary hematopoietic stem cells blood
36 chr1:220140800-220142800 Strong transcription HSMMtube muscle
37 chr1:220140800-220143800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:220140800-220144000 Strong transcription Lung lung
39 chr1:220140800-220144200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:220140800-220144200 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:220140800-220144200 Strong transcription Fetal Muscle Trunk muscle
42 chr1:220140800-220144200 Strong transcription Fetal Stomach stomach
43 chr1:220140800-220144400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:220140800-220146800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:220140800-220146800 Weak transcription Fetal Heart heart
46 chr1:220140800-220147000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:220140800-220150000 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr1:220140800-220150800 Strong transcription Left Ventricle heart
49 chr1:220140800-220161800 Strong transcription Fetal Thymus thymus
50 chr1:220140800-220162400 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015