No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs79534272 |
chr1:114444144-114444145 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs77831247 |
chr1:114444154-114444155 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs554274805 |
chr1:114444184-114444185 |
Weak transcription Strong transcription Enhancers Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs557191782 |
chr1:114444200-114444201 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs143683107 |
chr1:114444299-114444300 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs542693038 |
chr1:114444302-114444303 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs559212401 |
chr1:114444314-114444315 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs78563784 |
chr1:114444322-114444323 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs185948622 |
chr1:114444328-114444329 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs368146491 |
chr1:114444339-114444340 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs549396865 |
chr1:114444348-114444349 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs34751342 |
chr1:114444444-114444445 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs147043117 |
chr1:114444457-114444458 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs550100552 |
chr1:114444458-114444459 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs143769705 |
chr1:114444473-114444474 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs371683713 |
chr1:114444477-114444478 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs75117963 |
chr1:114444484-114444485 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs138880168 |
chr1:114444488-114444489 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs375975068 |
chr1:114444496-114444497 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs529490243 |
chr1:114444522-114444523 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs549574613 |
chr1:114444547-114444548 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs573648846 |
chr1:114444574-114444575 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs12079716 |
chr1:114444594-114444595 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
disease
|
24 |
rs377159938 |
chr1:114444598-114444599 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs551755388 |
chr1:114444615-114444616 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs369892580 |
chr1:114444640-114444641 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs74706689 |
chr1:114444656-114444657 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs189259390 |
chr1:114444682-114444683 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs557328961 |
chr1:114444724-114444725 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs573758056 |
chr1:114444754-114444755 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs536032288 |
chr1:114444761-114444762 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs553149311 |
chr1:114444770-114444771 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs112059103 |
chr1:114444773-114444774 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs544750052 |
chr1:114444840-114444841 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs564528571 |
chr1:114444867-114444868 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs574928114 |
chr1:114444895-114444896 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs543685230 |
chr1:114444909-114444910 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs112921678 |
chr1:114444914-114444915 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs374609197 |
chr1:114444948-114444949 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs77493246 |
chr1:114444975-114444976 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs376516195 |
chr1:114444997-114444998 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs563798493 |
chr1:114445004-114445005 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs529603033 |
chr1:114445030-114445031 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs549267856 |
chr1:114445056-114445057 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs182216995 |
chr1:114445098-114445099 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs528594952 |
chr1:114445119-114445120 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs551948046 |
chr1:114445145-114445146 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs187229500 |
chr1:114445201-114445202 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs368872641 |
chr1:114445236-114445237 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs537405509 |
chr1:114445237-114445238 |
Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|