Variant report

Variant	nsv820610
Chromosome Location	chr4:7483641-7484611
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 83 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:83 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11937662	chr4:7483656-7483657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs550096680	chr4:7483657-7483658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs565229851	chr4:7483664-7483665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs56062331	chr4:7483676-7483677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs532812366	chr4:7483680-7483681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs13140888	chr4:7483703-7483704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs550965691	chr4:7483710-7483711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs55923357	chr4:7483715-7483716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs56377216	chr4:7483731-7483732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs566428694	chr4:7483736-7483737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs56365226	chr4:7483771-7483772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs55764518	chr4:7483775-7483776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs56033134	chr4:7483796-7483797	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs13146480	chr4:7483798-7483799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs571688692	chr4:7483834-7483835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs112160956	chr4:7483836-7483837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs567382561	chr4:7483838-7483839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs113111023	chr4:7483843-7483844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs13114578	chr4:7483851-7483852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs55714722	chr4:7483873-7483874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs556542751	chr4:7483878-7483879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs369822116	chr4:7483891-7483892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs369974516	chr4:7483914-7483915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs374084655	chr4:7483930-7483931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs28590384	chr4:7483951-7483952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs376135658	chr4:7483969-7483970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs28550525	chr4:7483971-7483972	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs28754368	chr4:7483990-7483991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs28484928	chr4:7483992-7483993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs573974825	chr4:7484007-7484008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs55715164	chr4:7484010-7484011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374988499	chr4:7484029-7484030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs369365176	chr4:7484031-7484032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs75448282	chr4:7484069-7484070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs62277653	chr4:7484082-7484083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs78499466	chr4:7484089-7484090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185511075	chr4:7484090-7484091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs62277654	chr4:7484110-7484111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs554873098	chr4:7484113-7484114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs55820330	chr4:7484157-7484158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs201419041	chr4:7484165-7484166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs55937156	chr4:7484189-7484190	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs553897463	chr4:7484193-7484194	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs377614342	chr4:7484207-7484208	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190668685	chr4:7484231-7484232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs377515107	chr4:7484244-7484245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs558534506	chr4:7484245-7484246	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs369550806	chr4:7484265-7484266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs374276613	chr4:7484269-7484270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs576718626	chr4:7484282-7484283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Melanoma	20688739	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:7483600-7486400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:7484000-7486800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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