Variant report
Variant | nsv820697 |
---|---|
Chromosome Location | chr22:16884806-17041753 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:915)
- CpG islands (count:427)
- Chromatin interactive region (count:1)
- LncRNA region (count:17)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:16887810-16887889 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:16912144-16912145 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr22:16953138-16953239 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr22:16950758-16950943 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr22:16924216-16924217 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr22:17035973-17035982 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr22:16950592-16951044 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr22:17031177-17031349 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr22:16951987-16952028 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr22:16916895-16916925 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr22:16953162-16953167 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr22:16994923-16995006 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr22:16998935-16998936 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr22:16952471-16952703 | K562 | blood: | n/a | n/a |
15 | BACH1 | chr22:16910458-16910647 | K562 | blood: | n/a | n/a |
16 | BACH1 | chr22:16950675-16950910 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr22:16910900-16910911 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr22:16946713-16946719 | K562 | blood: | n/a | n/a |
19 | BACH1 | chr22:16989810-16989921 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr22:16900527-16900640 | K562 | blood: | n/a | n/a |
21 | BATF | chr22:16989884-16990164 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:16991252-16991651 | GM12878 | blood: | n/a | chr22:16991415-16991426 |
23 | BATF | chr22:16921743-16922080 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:17031970-17032165 | GM12878 | blood: | n/a | chr22:17032079-17032090 |
25 | BATF | chr22:16905672-16905908 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:17004917-17005105 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:17036184-17036425 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr22:17029707-17029955 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr22:16985972-16986133 | GM12878 | blood: | n/a | chr22:16986065-16986073 |
30 | BCL11A | chr22:17000349-17000532 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr22:17037907-17038098 | GM12878 | blood: | n/a | chr22:17037910-17037923 |
32 | BCL11A | chr22:17036170-17036467 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:16988062-16988269 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:16921779-16921976 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:17004850-17005088 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr22:16940606-16940822 | GM12878 | blood: | n/a | n/a |
37 | BHLHE40 | chr22:16885451-16885761 | K562 | blood: | n/a | n/a |
38 | BHLHE40 | chr22:16904403-16904804 | K562 | blood: | n/a | chr22:16904588-16904601 chr22:16904590-16904599 chr22:16904590-16904599 chr22:16904591-16904600 chr22:16904534-16904550 |
39 | BHLHE40 | chr22:16924598-16924707 | K562 | blood: | n/a | n/a |
40 | BHLHE40 | chr22:16913871-16914129 | HepG2 | liver: | n/a | n/a |
41 | BHLHE40 | chr22:16885131-16885151 | K562 | blood: | n/a | n/a |
42 | BHLHE40 | chr22:16944334-16944518 | K562 | blood: | n/a | n/a |
43 | BHLHE40 | chr22:17000940-17001134 | K562 | blood: | n/a | chr22:17001052-17001061 chr22:17001052-17001061 chr22:17001051-17001060 |
44 | CBX3 | chr22:17034003-17034282 | K562 | blood: | n/a | n/a |
45 | CBX3 | chr22:17035726-17036879 | K562 | blood: | n/a | n/a |
46 | CBX3 | chr22:17035713-17036855 | K562 | blood: | n/a | n/a |
47 | CBX3 | chr22:17034389-17034720 | K562 | blood: | n/a | n/a |
48 | CCNT2 | chr22:17040556-17041065 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr22:16921715-16922219 | K562 | blood: | n/a | chr22:16921974-16921991 chr22:16921975-16921988 |
50 | CEBPB | chr22:17015317-17015517 | HepG2 | liver: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:16998752-16998802 | H1-hESC | embryonic stem cell: | embryo |
2 | chr22:17002291-17002341 | NB4 | blood: | n/a |
3 | chr22:17002291-17002341 | MCF-7 | breast: | n/a |
4 | chr22:17001266-17001316 | AG10803 | skin: | n/a |
5 | chr22:17001515-17001565 | RPTEC | kidney: | n/a |
6 | chr22:17002291-17002341 | PrEC | prostate: | n/a |
7 | chr22:17002291-17002341 | HPAEpiC | pulmonary alveolar: | n/a |
8 | chr22:17001515-17001565 | PANC-1 | pancreas: | n/a |
9 | chr22:16998752-16998802 | Hepatocyte | liver: | n/a |
10 | chr22:17001266-17001316 | PANC-1 | pancreas: | n/a |
11 | chr22:17002014-17002064 | GM19239 | blood: | n/a |
12 | chr22:17002014-17002064 | PANC-1 | pancreas: | n/a |
13 | chr22:17002014-17002064 | HRE | kidney: | n/a |
14 | chr22:17000596-17000646 | MCF10A-Er-Src | breast: | n/a |
15 | chr22:16998752-16998802 | HEK293 | kidney: | embryo |
16 | chr22:17002014-17002064 | HEK293 | kidney: | embryo |
17 | chr22:17002014-17002064 | AG09309 | skin: | n/a |
18 | chr22:17001515-17001565 | NB4 | blood: | n/a |
19 | chr22:17001515-17001565 | HepG2 | liver: | n/a |
20 | chr22:17002043-17002093 | SKMC | muscle: | n/a |
21 | chr22:16998752-16998802 | HCT-116 | colon: | n/a |
22 | chr22:17000596-17000646 | HL-60 | blood: | n/a |
23 | chr22:17001515-17001565 | SAEC | small airway: | n/a |
24 | chr22:17000596-17000646 | RPTEC | kidney: | n/a |
25 | chr22:17002291-17002341 | HCT-116 | colon: | n/a |
26 | chr22:17001515-17001565 | BJ | skin: | n/a |
27 | chr22:17001515-17001565 | PrEC | prostate: | n/a |
28 | chr22:17002291-17002341 | GM12878 | blood: | n/a |
29 | chr22:16998752-16998802 | NT2-D1 | testis: | n/a |
30 | chr22:17001266-17001316 | HEK293 | kidney: | embryo |
31 | chr22:17002043-17002093 | ECC-1 | luminal epithelium: | n/a |
32 | chr22:17000596-17000646 | HIPEpiC | eye: | n/a |
33 | chr22:17001515-17001565 | HRE | kidney: | n/a |
34 | chr22:17001266-17001316 | GM12891 | blood: | n/a |
35 | chr22:17002291-17002341 | LNCaP | prostate: | n/a |
36 | chr22:17002014-17002064 | ovcar-3 | ovarian: | n/a |
37 | chr22:17001266-17001316 | SK-N-SH_RA | brain: | n/a |
38 | chr22:17001266-17001316 | HAEpiC | amniotic membrane: | n/a |
39 | chr22:17001266-17001316 | RPTEC | kidney: | n/a |
40 | chr22:17001266-17001316 | SK-N-MC | brain: | n/a |
41 | chr22:17002291-17002341 | HRCEpiC | kidney: | n/a |
42 | chr22:17000596-17000646 | H1-hESC | embryonic stem cell: | embryo |
43 | chr22:17001515-17001565 | K562 | blood: | n/a |
44 | chr22:17001266-17001316 | GM19239 | blood: | n/a |
45 | chr22:16998752-16998802 | HCPEpiC | choroid plexus: | n/a |
46 | chr22:17000596-17000646 | NH-A | brain: | n/a |
47 | chr22:17001515-17001565 | ovcar-3 | ovarian: | n/a |
48 | chr22:17001266-17001316 | AG09309 | skin: | n/a |
49 | chr22:17001266-17001316 | NHBE | bronchial: | n/a |
50 | chr22:16998752-16998802 | RPTEC | kidney: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:17040660..17041327-chr7:128392491..128392991,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-IL17RA-22 | chr22:16905970-16906213 | NONHSAT083122 |
2 | lnc-CCT8L2-5 | chr22:16919027-16919177 | NONHSAT083123 |
3 | lnc-IL17RA-21 | chr22:16956377-16956672 | expReg_chr22_183_+ |
4 | lnc-IL17RA-22 | chr22:16906243-16906756 | NONHSAT083122 |
5 | lnc-IL17RA-22 | chr22:16905250-16905937 | NONHSAT083122 |
6 | lnc-CCT8L2-3 | chr22:17040420-17040475 | NONHSAT083125 |
7 | lnc-CCT8L2-5 | chr22:16909690-16909904 | NONHSAT083123 |
8 | lnc-CCT8L2-5 | chr22:16940672-16940846 | NONHSAT083123 |
9 | lnc-CCT8L2-5 | chr22:16920053-16920131 | NONHSAT083123 |
10 | lnc-IL17RA-22 | chr22:16904668-16904833 | NONHSAT083122 |
11 | lnc-CCT8L2-5 | chr22:16957442-16957613 | NONHSAT083123 |
12 | lnc-CCT8L2-5 | chr22:16953593-16953719 | NONHSAT083123 |
13 | lnc-CCT8L2-5 | chr22:16914068-16914203 | NONHSAT083123 |
14 | lnc-IL17RA-23 | chr22:16892151-16892320 | NONHSAT083121 |
15 | lnc-CCT8L2-5 | chr22:16954829-16954970 | NONHSAT083123 |
16 | lnc-CCT8L2-5 | chr22:16915106-16915196 | NONHSAT083123 |
17 | lnc-IL17RA-23 | chr22:16898526-16900734 | NONHSAT083121 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CHEK2P4 | TF binding region |
SLC9B1P4 | TF binding region |
PABPC1P9 | TF binding region |
ACTR3BP6 | TF binding region |
ENSG00000273362 | TF binding region |
ENSG00000226160 | TF binding region |
CHEK2P4 | CpG island |
SLC9B1P4 | CpG island |
PABPC1P9 | CpG island |
ACTR3BP6 | CpG island |
ENSG00000273362 | CpG island |
ENSG00000226160 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs12152180 | chr22:16884830-16884831 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs5993971 | chr22:16884842-16884843 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
3 | rs77357665 | chr22:16884856-16884857 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs572532877 | chr22:16884861-16884862 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs5993973 | chr22:16884869-16884870 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs564272040 | chr22:16884883-16884884 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs73387985 | chr22:16884913-16884914 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs531665934 | chr22:16884942-16884943 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs543689408 | chr22:16884961-16884962 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs111451220 | chr22:16884971-16884972 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs199668438 | chr22:16884972-16884973 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs368095931 | chr22:16884975-16884976 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs529445853 | chr22:16884978-16884979 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs551300940 | chr22:16884979-16884980 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs200643107 | chr22:16884980-16884981 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs5748584 | chr22:16884985-16884986 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs561801646 | chr22:16885000-16885001 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs117977527 | chr22:16885002-16885003 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs116685093 | chr22:16885012-16885013 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs369261425 | chr22:16885022-16885023 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs201449391 | chr22:16885037-16885038 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs547034969 | chr22:16885054-16885055 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs559592983 | chr22:16885097-16885098 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs375989848 | chr22:16885115-16885116 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs200645818 | chr22:16885116-16885117 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs112190006 | chr22:16885123-16885124 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs374874375 | chr22:16885163-16885164 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs538019988 | chr22:16885384-16885385 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs186597123 | chr22:16885389-16885390 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs111748332 | chr22:16885409-16885410 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs568613244 | chr22:16885412-16885413 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs73387987 | chr22:16885462-16885463 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs79341485 | chr22:16885470-16885471 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs535850101 | chr22:16885473-16885474 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs554199492 | chr22:16885474-16885475 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs78335153 | chr22:16885502-16885503 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs572619373 | chr22:16885513-16885514 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs539920804 | chr22:16885545-16885546 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs558019197 | chr22:16885558-16885559 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs576202660 | chr22:16885565-16885566 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs79468124 | chr22:16885589-16885590 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs543227214 | chr22:16885609-16885610 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs80172102 | chr22:16885612-16885613 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs5746882 | chr22:16885620-16885621 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
45 | rs573842135 | chr22:16885627-16885628 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs565395960 | chr22:16885630-16885631 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs191009094 | chr22:16885631-16885632 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs115387931 | chr22:16885634-16885635 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs9617907 | chr22:16885676-16885677 | Inactive region | TF binding region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
50 | rs140136915 | chr22:16885685-16885686 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Epilepsy | 20923578 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 17142309 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Non-syndromic sensorineural hearing loss | 18496225 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Adenoid cystic carcinoma | 18332873 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Gastric cancer | 22591714 | CNVD |
Autism | 22958593 | CNVD |
Digeorge syndrome | 16199537 | CNVD |
Schizophrenia | 22958593 | CNVD |
Schizophrenia | 21285140 | CNVD |
Schizophrenia | 22241247 | CNVD |
Autism | 22241247 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Schizophrenia | 21399695 | CNVD |
22q11.21 microdeletion syndrome | 19193630 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Schizophrenia | 19197363 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Schizophrenia | 20388499 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Intellectual disability | 21811512 | CNVD |
Breast cancer | 22522925 | CNVD |
Wilms tumour | 21544195 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:16904200-16904600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
2 | chr22:16904200-16904600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr22:16904200-16904600 | ZNF genes & repeats | Right Atrium | heart |
4 | chr22:16959000-16959200 | Flanking Bivalent TSS/Enh | Primary T helper memory cells from peripheral blood 2 | blood |
5 | chr22:16959000-16959200 | ZNF genes & repeats | Primary T helper 17 cells PMA-I stimulated | -- |
6 | chr22:16959000-16959200 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
7 | chr22:16959000-16959200 | ZNF genes & repeats | Primary T regulatory cells fromperipheralblood | blood |
8 | chr22:16959000-16959200 | Flanking Bivalent TSS/Enh | Primary T killer memory cells from peripheral blood | blood |
9 | chr22:16959000-16959200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
10 | chr22:16959000-16959200 | ZNF genes & repeats | Muscle Satellite Cultured Cells | -- |
11 | chr22:16959000-16959200 | ZNF genes & repeats | Colon Smooth Muscle | Colon |
12 | chr22:16959000-16959200 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
13 | chr22:16959000-16959200 | ZNF genes & repeats | Esophagus | oesophagus |
14 | chr22:16959000-16959200 | ZNF genes & repeats | Gastric | stomach |
15 | chr22:16959000-16959200 | Enhancers | Left Ventricle | heart |
16 | chr22:16959000-16959200 | ZNF genes & repeats | Rectal Mucosa Donor 29 | rectum |
17 | chr22:16959000-16959200 | ZNF genes & repeats | Rectal Mucosa Donor 31 | rectum |
18 | chr22:16959000-16959200 | ZNF genes & repeats | Skeletal Muscle Male | skeletal muscle |
19 | chr22:16959000-16959200 | ZNF genes & repeats | Skeletal Muscle Female | skeletal muscle |
20 | chr22:16959000-16959200 | Enhancers | Thymus | Thymus |
21 | chr22:16959200-16959600 | Weak transcription | Gastric | stomach |
22 | chr22:16994800-16995000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
23 | chr22:17000600-17001600 | Enhancers | Placenta | Placenta |
24 | chr22:17001000-17001200 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
25 | chr22:17001000-17001200 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
26 | chr22:17001000-17001200 | Enhancers | Adipose Nuclei | Adipose |
27 | chr22:17001000-17001400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
28 | chr22:17001000-17001400 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
29 | chr22:17001000-17001600 | Active TSS | Fetal Brain Female | brain |
30 | chr22:17001000-17001800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
31 | chr22:17001000-17001800 | ZNF genes & repeats | Right Atrium | heart |
32 | chr22:17001200-17001400 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
33 | chr22:17001200-17001400 | Bivalent/Poised TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
34 | chr22:17001400-17001600 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
35 | chr22:17001400-17001600 | Flanking Bivalent TSS/Enh | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
36 | chr22:17001600-17001800 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
37 | chr22:17001600-17001800 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
38 | chr22:17001600-17002000 | Flanking Active TSS | Placenta | Placenta |
39 | chr22:17001800-17002000 | Strong transcription | Right Atrium | heart |
40 | chr22:17002000-17039200 | Weak transcription | Right Atrium | heart |
41 | chr22:17007800-17008800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
42 | chr22:17012600-17013200 | Enhancers | Spleen | Spleen |
43 | chr22:17023600-17025000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
44 | chr22:17024000-17024600 | Enhancers | K562 | blood |
45 | chr22:17024600-17025000 | Bivalent Enhancer | K562 | blood |
46 | chr22:17030600-17031000 | Enhancers | K562 | blood |
47 | chr22:17038200-17038800 | Enhancers | K562 | blood |
48 | chr22:17038200-17042600 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
49 | chr22:17038800-17042000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
50 | chr22:17039000-17039800 | Enhancers | Placenta | Placenta |