Variant report

Variant nsv821263
Chromosome Location chr6:58773370-58780132
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:391 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:58769800-58773600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:58770000-58773400 Weak transcription Aorta Aorta
3 chr6:58770800-58773400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:58771000-58773400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr6:58771000-58773400 Weak transcription Liver Liver
6 chr6:58771200-58773400 Weak transcription Adipose Nuclei Adipose
7 chr6:58773400-58773600 Active TSS Aorta Aorta
8 chr6:58773400-58773600 Active TSS Ovary ovary
9 chr6:58773400-58773600 Active TSS Psoas Muscle Psoas
10 chr6:58773400-58774000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
11 chr6:58773400-58774000 Flanking Bivalent TSS/Enh Hela-S3 cervix
12 chr6:58773400-58774800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:58773400-58774800 ZNF genes & repeats Brain Hippocampus Middle brain
14 chr6:58773400-58774800 ZNF genes & repeats Colon Smooth Muscle Colon
15 chr6:58773400-58774800 ZNF genes & repeats Duodenum Mucosa Duodenum
16 chr6:58773400-58774800 ZNF genes & repeats Fetal Lung lung
17 chr6:58773400-58774800 ZNF genes & repeats Rectal Smooth Muscle rectum
18 chr6:58773400-58774800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
19 chr6:58773400-58774800 ZNF genes & repeats Stomach Smooth Muscle stomach
20 chr6:58773400-58774800 ZNF genes & repeats GM12878-XiMat blood
21 chr6:58773400-58774800 ZNF genes & repeats HUVEC blood vessel
22 chr6:58773400-58775000 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
23 chr6:58773400-58775000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:58773400-58775000 ZNF genes & repeats Brain Anterior Caudate brain
25 chr6:58773400-58775000 ZNF genes & repeats Brain Cingulate Gyrus brain
26 chr6:58773400-58775000 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
27 chr6:58773400-58775000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
28 chr6:58773400-58775000 ZNF genes & repeats Dnd41 blood
29 chr6:58773400-58775200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr6:58773400-58775200 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:58773400-58775200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
32 chr6:58773400-58775400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
33 chr6:58773400-58775400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
34 chr6:58773400-58775600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
35 chr6:58773400-58775600 ZNF genes & repeats Liver Liver
36 chr6:58773400-58775800 ZNF genes & repeats HMEC breast
37 chr6:58773400-58776000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:58773400-58776000 ZNF genes & repeats NH-A brain
39 chr6:58773400-58776200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr6:58773400-58776200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
41 chr6:58773400-58776400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:58773400-58776400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
43 chr6:58773400-58776600 ZNF genes & repeats H1 Cell Line embryonic stem cell
44 chr6:58773400-58776600 ZNF genes & repeats Primary hematopoietic stem cells blood
45 chr6:58773400-58776600 ZNF genes & repeats Gastric stomach
46 chr6:58773400-58776600 ZNF genes & repeats Small Intestine intestine
47 chr6:58773400-58779400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
48 chr6:58773400-58779400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:58773400-58779400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr6:58773400-58779400 ZNF genes & repeats H9 Cell Line embryonic stem cell

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