Variant report

Variant	nsv822090
Chromosome Location	chr3:52292814-52311153
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:202)
CpG islands
(count:427)
Chromatin interactive
region (count:41)
LncRNA
region (count:1)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:202 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr3:52293307-52293402	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr3:52305032-52305765	GM12878	blood:	n/a	n/a
3	BRCA1	chr3:52301228-52301232	GM12878	blood:	n/a	n/a
4	CEBPB	chr3:52299353-52299698	ECC-1	luminal epithelium:	n/a	n/a
5	CEBPB	chr3:52299341-52299730	MCF-7	breast:	n/a	n/a
6	CHD1	chr3:52310531-52313715	IMR90	lung:	n/a	n/a
7	CHD1	chr3:52310453-52310532	GM12878	blood:	n/a	n/a
8	CTCF	chr3:52305739-52305899	HepG2	liver:	n/a	n/a
9	CTCF	chr3:52305740-52305890	HBMEC	blood vessel:	n/a	n/a
10	CTCF	chr3:52305700-52305850	GM12864	blood:	n/a	n/a
11	CTCF	chr3:52310585-52310653	GM12878	blood:	n/a	n/a
12	CTCF	chr3:52305700-52305850	GM12878	blood:	n/a	n/a
13	CTCF	chr3:52299640-52299790	SAEC	small airway:	n/a	n/a
14	CTCF	chr3:52299611-52299765	LNCaP	prostate:	n/a	n/a
15	CTCF	chr3:52299560-52299710	HCT-116	colon:	n/a	n/a
16	CTCF	chr3:52299620-52299770	HCT-116	colon:	n/a	n/a
17	CTCF	chr3:52299616-52299718	NHEK	skin:	n/a	n/a
18	CTCF	chr3:52305740-52305890	GM12865	blood:	n/a	n/a
19	CTCF	chr3:52305706-52305901	H1-hESC	embryonic stem cell:	n/a	n/a
20	CTCF	chr3:52299600-52299750	NB4	blood:	n/a	n/a
21	CTCF	chr3:52305700-52305850	A549	lung:	n/a	n/a
22	CTCF	chr3:52299591-52299727	MCF-7	breast:	n/a	n/a
23	CTCF	chr3:52305720-52305870	HMF	breast:	n/a	n/a
24	CTCF	chr3:52299640-52299790	GM12864	blood:	n/a	n/a
25	CTCF	chr3:52299540-52299690	GM12871	blood:	n/a	n/a
26	CTCF	chr3:52299680-52299830	HEEpiC	esophagus:	n/a	n/a
27	CTCF	chr3:52305720-52305870	RPTEC	kidney:	n/a	n/a
28	CTCF	chr3:52299620-52299708	Hela-S3	cervix:	n/a	n/a
29	CTCF	chr3:52299360-52299510	HCT-116	colon:	n/a	n/a
30	CTCF	chr3:52304960-52305110	HUVEC	blood vessel:	n/a	chr3:52305029-52305036
31	CTCF	chr3:52299576-52299739	MCF-7	breast:	n/a	n/a
32	CTCF	chr3:52299579-52299733	A549	lung:	n/a	n/a
33	CTCF	chr3:52299582-52299730	H1-hESC	embryonic stem cell:	n/a	n/a
34	CTCF	chr3:52305740-52305890	GM12873	blood:	n/a	n/a
35	CTCF	chr3:52299780-52299930	GM12872	blood:	n/a	n/a
36	CTCF	chr3:52299660-52299810	GM06990	blood:	n/a	n/a
37	CTCF	chr3:52299560-52299710	GM12872	blood:	n/a	n/a
38	CTCF	chr3:52305700-52305850	GM12875	blood:	n/a	n/a
39	CTCF	chr3:52299613-52299720	GM19240	blood:	n/a	n/a
40	CTCF	chr3:52305660-52305810	GM12870	blood:	n/a	n/a
41	CTCF	chr3:52299564-52299767	MCF-7	breast:	n/a	n/a
42	CTCF	chr3:52305828-52305849	Kidney_OC	kidney:	n/a	n/a
43	CTCF	chr3:52299545-52299700	K562	blood:	n/a	n/a
44	CTCF	chr3:52305760-52305910	HCPEpiC	choroid plexus:	n/a	n/a
45	CTCF	chr3:52299608-52299738	Gliobla	brain:	n/a	n/a
46	CTCF	chr3:52299492-52299718	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTCF	chr3:52305720-52305870	AG04450	lung:	n/a	n/a
48	CTCF	chr3:52299520-52299670	Caco-2	colon:	n/a	n/a
49	CTCF	chr3:52299580-52299730	SK-N-SH_RA	brain:	n/a	n/a
50	CTCF	chr3:52305660-52305810	HCPEpiC	choroid plexus:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:52294457-52294507	K562	blood:	n/a
2	chr3:52303511-52303561	NB4	blood:	n/a
3	chr3:52310724-52310774	H1-hESC	embryonic stem cell:	embryo
4	chr3:52303212-52303262	PANC-1	pancreas:	n/a
5	chr3:52310724-52310774	Jurkat	blood:	n/a
6	chr3:52303511-52303561	AG09319	gingival:	n/a
7	chr3:52310724-52310774	AG09309	skin:	n/a
8	chr3:52310724-52310774	SK-N-SH_RA	brain:	n/a
9	chr3:52310724-52310774	HAEpiC	amniotic membrane:	n/a
10	chr3:52302150-52302200	GM19239	blood:	n/a
11	chr3:52302150-52302200	HCM	heart:	n/a
12	chr3:52310724-52310774	AoSMC	blood vessel:	n/a
13	chr3:52302252-52302302	HRPEpiC	eye:	n/a
14	chr3:52303212-52303262	Caco-2	colon:	n/a
15	chr3:52303511-52303561	NH-A	brain:	n/a
16	chr3:52303212-52303262	NT2-D1	testis:	n/a
17	chr3:52310724-52310774	HRPEpiC	eye:	n/a
18	chr3:52303511-52303561	GM19239	blood:	n/a
19	chr3:52294457-52294507	SK-N-SH	brain:	n/a
20	chr3:52310724-52310774	HL-60	blood:	n/a
21	chr3:52310724-52310774	RPTEC	kidney:	n/a
22	chr3:52310724-52310774	SKMC	muscle:	n/a
23	chr3:52302252-52302302	Jurkat	blood:	n/a
24	chr3:52302150-52302200	BJ	skin:	n/a
25	chr3:52303212-52303262	HL-60	blood:	n/a
26	chr3:52302252-52302302	HL-60	blood:	n/a
27	chr3:52302252-52302302	NH-A	brain:	n/a
28	chr3:52303511-52303561	HUVEC	blood vessel:	n/a
29	chr3:52310724-52310774	GM12891	blood:	n/a
30	chr3:52310724-52310774	ProgFib	skin:	n/a
31	chr3:52302150-52302200	U87	brain:	n/a
32	chr3:52294457-52294507	Caco-2	colon:	n/a
33	chr3:52302402-52302452	HRCEpiC	kidney:	n/a
34	chr3:52310724-52310774	HPAEpiC	pulmonary alveolar:	n/a
35	chr3:52310724-52310774	T-47D	breast:	n/a
36	chr3:52302150-52302200	SK-N-SH	brain:	n/a
37	chr3:52303511-52303561	SK-N-MC	brain:	n/a
38	chr3:52302402-52302452	AoSMC	blood vessel:	n/a
39	chr3:52302402-52302452	SK-N-SH	brain:	n/a
40	chr3:52302252-52302302	NHDF-neo	bronchial:	n/a
41	chr3:52302150-52302200	GM12891	blood:	n/a
42	chr3:52310724-52310774	GM06990	blood:	n/a
43	chr3:52302402-52302452	Hela-S3	cervix:	n/a
44	chr3:52302252-52302302	HIPEpiC	eye:	n/a
45	chr3:52302150-52302200	HEK293	kidney:	embryo
46	chr3:52302150-52302200	HRPEpiC	eye:	n/a
47	chr3:52310724-52310774	K562	blood:	n/a
48	chr3:52303511-52303561	AoSMC	blood vessel:	n/a
49	chr3:52303511-52303561	HRCEpiC	kidney:	n/a
50	chr3:52302252-52302302	PFSK-1	brain:	n/a

(count:41 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52273103..52274845-chr3:52307550..52309126,2	K562	blood:
2	chr3:52294156..52296311-chr3:52321858..52323486,2	K562	blood:
3	chr3:52297780..52305259-chr3:52310132..52314407,14	MCF-7	breast:
4	chr3:52290955..52293788-chr3:52297158..52298749,2	MCF-7	breast:
5	chr3:52297780..52305259-chr3:52310132..52314407,14	MCF-7	breast:
6	chr3:52304087..52306795-chr3:52318600..52320906,2	K562	blood:
7	chr3:52270811..52276588-chr3:52310648..52314131,11	K562	blood:
8	chr3:52289327..52293774-chr3:52294215..52297996,5	MCF-7	breast:
9	chr3:52278055..52281861-chr3:52310505..52315451,9	K562	blood:
10	chr3:52264055..52267306-chr3:52309351..52312799,8	MCF-7	breast:
11	chr3:52310660..52314319-chr3:52321399..52324807,9	K562	blood:
12	chr3:52311051..52315983-chr3:52317623..52323290,10	MCF-7	breast:
13	chr3:52304494..52307260-chr3:52321098..52323365,4	K562	blood:
14	chr3:52271620..52273197-chr3:52302403..52304175,2	MCF-7	breast:
15	chr3:52298716..52301587-chr3:52317190..52319197,2	K562	blood:
16	chr3:52272807..52274330-chr3:52300733..52302349,2	MCF-7	breast:
17	chr3:52290955..52293788-chr3:52297158..52298749,2	MCF-7	breast:
18	chr3:52306677..52308249-chr3:52309532..52311705,2	MCF-7	breast:
19	chr3:52292693..52296785-chr3:52298955..52303017,4	K562	blood:
20	chr3:52310470..52312704-chr3:52421600..52424589,2	MCF-7	breast:
21	chr3:52310461..52311969-chr3:52386050..52388691,2	K562	blood:
22	chr1:28973386..28976212-chr3:52311138..52314136,3	K562	blood:
23	chr3:52292200..52293754-chr3:52305089..52307890,2	MCF-7	breast:
24	chr3:52269533..52276077-chr3:52310385..52313504,11	MCF-7	breast:
25	chr3:52279829..52282973-chr3:52309699..52312689,5	MCF-7	breast:
26	chr3:52270811..52274971-chr3:52310538..52315239,11	K562	blood:
27	chr3:52028423..52029953-chr3:52307587..52309359,2	MCF-7	breast:
28	chr3:52278055..52281861-chr3:52310588..52314481,6	K562	blood:
29	chr3:52269470..52276026-chr3:52310334..52314212,10	MCF-7	breast:
30	chr3:52294956..52298610-chr3:52301409..52305612,4	MCF-7	breast:
31	chr3:52282177..52283761-chr3:52291463..52293959,2	K562	blood:
32	chr3:52304279..52306605-chr3:52344812..52346956,2	K562	blood:
33	chr3:52310738..52313208-chr3:52476812..52479185,3	K562	blood:
34	chr20:46129180..46131048-chr3:52310795..52312947,2	MCF-7	breast:
35	chr3:52282752..52284466-chr3:52308122..52311758,3	K562	blood:
36	chr3:52287693..52289241-chr3:52294525..52296134,2	K562	blood:
37	chr3:52289327..52293774-chr3:52294215..52297996,5	MCF-7	breast:
38	chr3:52266609..52268371-chr3:52308578..52311025,2	MCF-7	breast:
39	chr3:52306677..52308249-chr3:52309532..52311705,2	MCF-7	breast:
40	chr3:52292200..52293754-chr3:52305089..52307890,2	MCF-7	breast:
41	chr3:52263321..52268061-chr3:52310039..52314728,5	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TWF2-1	chr3:52310342-52310667	NONHSAT089907

miRNA name	Chromosome Location	mirBase accession
hsa-let-7g-5p	chr3:52302352-52302373	MIMAT0000414
hsa-let-7g-3p	chr3:52302296-52302316	MIMAT0004584

No data

Variant related genes	Relation type
MIRLET7G	TF binding region
WDR82	TF binding region
MIRLET7G	CpG island
WDR82	CpG island
ENSG00000114841	chromatin interactions
ENSG00000168237	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000164091	chromatin interactions
ENSG00000010319	chromatin interactions
ENSG00000124151	chromatin interactions
ENSG00000162244	chromatin interactions
ENSG00000173366	chromatin interactions
ENSG00000239732	chromatin interactions
ENSG00000199150	chromatin interactions
ENSG00000164088	chromatin interactions
ENSG00000243224	chromatin interactions
ENSG00000247596	chromatin interactions
HIST1H1E	Mature miRNA region
CDC25A	Mature miRNA region
IGF2BP1	Mature miRNA region
KRAS	Mature miRNA region
RANBP2	Mature miRNA region
DCAF8	Mature miRNA region
BCL2L1	Mature miRNA region
SFT2D1	Mature miRNA region
IL13	Mature miRNA region
HMGA2	Mature miRNA region
CDKN2A	Mature miRNA region
COL1A2	Mature miRNA region
BRD1	Mature miRNA region
MYC	Mature miRNA region
MAGED1	Mature miRNA region
UBE3C	Mature miRNA region
CDK6	Mature miRNA region
RAB21	Mature miRNA region
BMI1	Mature miRNA region
RPL12	Mature miRNA region
SART3	Mature miRNA region
EEF1A1	Mature miRNA region
TBC1D9	Mature miRNA region
MAP3K1	Mature miRNA region
AGO1	Mature miRNA region
RRM2	Mature miRNA region
HMGB1	Mature miRNA region
AKAP11	Mature miRNA region

Extended variants
information (count: 603 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:603 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs565522711	chr3:52292845-52292846	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs187832542	chr3:52292854-52292855	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs568305709	chr3:52292864-52292865	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs150340112	chr3:52292871-52292872	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs566098743	chr3:52292956-52292957	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs528880431	chr3:52292995-52292996	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs113772533	chr3:52293030-52293031	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs143728464	chr3:52293166-52293167	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs375455031	chr3:52293171-52293172	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs576583221	chr3:52293190-52293191	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs369526615	chr3:52293299-52293300	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs372738087	chr3:52293304-52293305	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs55847657	chr3:52293312-52293313	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
14	rs557664171	chr3:52293376-52293377	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs370375154	chr3:52293404-52293405	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs534063402	chr3:52293531-52293532	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs554123611	chr3:52293538-52293539	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs539787823	chr3:52293571-52293572	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs147226656	chr3:52293616-52293617	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs543045638	chr3:52293646-52293647	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs374595020	chr3:52293672-52293673	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs536171432	chr3:52293675-52293676	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs114867760	chr3:52293694-52293695	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs565324828	chr3:52293701-52293702	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs572323470	chr3:52293702-52293703	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs200969602	chr3:52293730-52293731	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs200581078	chr3:52293795-52293796	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs3210487	chr3:52293859-52293860	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
29	rs199822245	chr3:52293900-52293901	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs201837227	chr3:52293907-52293908	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs140282841	chr3:52293936-52293937	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs562549699	chr3:52293990-52293991	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs200014669	chr3:52294021-52294022	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs542646379	chr3:52294023-52294024	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs557427818	chr3:52294026-52294027	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs531284903	chr3:52294069-52294070	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs555522856	chr3:52294072-52294073	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs575277100	chr3:52294075-52294076	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs56296139	chr3:52294098-52294099	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs113895715	chr3:52294175-52294176	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
41	rs533997034	chr3:52294203-52294204	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs148416654	chr3:52294206-52294207	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs111670716	chr3:52294214-52294215	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs536586406	chr3:52294227-52294228	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs540893445	chr3:52294232-52294233	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs370833341	chr3:52294390-52294391	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs201053345	chr3:52294406-52294407	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs200012348	chr3:52294437-52294438	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs373670537	chr3:52294456-52294457	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs376680476	chr3:52294470-52294471	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Breast cancer	22522925	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD

Chromatin state (count:1180 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52281800-52303400	Weak transcription	Right Atrium	heart
2	chr3:52282000-52298800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:52282000-52299400	Strong transcription	Liver	Liver
4	chr3:52282200-52293200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr3:52282200-52303000	Strong transcription	Fetal Lung	lung
6	chr3:52282200-52310000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr3:52282400-52297200	Strong transcription	Duodenum Smooth Muscle	Duodenum
8	chr3:52282400-52309600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr3:52282600-52304000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr3:52282600-52308200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr3:52282800-52303800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr3:52282800-52305000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr3:52283000-52306000	Strong transcription	HUES6 Cell Line	embryonic stem cell
14	chr3:52283200-52308400	Strong transcription	HUES48 Cell Line	embryonic stem cell
15	chr3:52283400-52304600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr3:52283400-52305400	Strong transcription	Brain Germinal Matrix	brain
17	chr3:52283600-52308800	Strong transcription	Fetal Muscle Trunk	muscle
18	chr3:52283800-52309600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
19	chr3:52284400-52304800	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr3:52284600-52293000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr3:52284600-52305800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
22	chr3:52284800-52300200	Strong transcription	Pancreas	Pancrea
23	chr3:52285000-52302600	Strong transcription	A549	lung
24	chr3:52285600-52308400	Strong transcription	HUES64 Cell Line	embryonic stem cell
25	chr3:52285800-52307400	Strong transcription	H1 Cell Line	embryonic stem cell
26	chr3:52286000-52298200	Strong transcription	Gastric	stomach
27	chr3:52286000-52302200	Strong transcription	Left Ventricle	heart
28	chr3:52286400-52306800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr3:52286600-52293400	Strong transcription	NHDF-Ad	bronchial
30	chr3:52286600-52303400	Strong transcription	NHLF	lung
31	chr3:52287000-52293400	Strong transcription	HSMMtube	muscle
32	chr3:52287200-52294000	Strong transcription	H9 Cell Line	embryonic stem cell
33	chr3:52287200-52296800	Strong transcription	Right Ventricle	heart
34	chr3:52287400-52295200	Strong transcription	Aorta	Aorta
35	chr3:52287400-52305400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr3:52287400-52305600	Strong transcription	HepG2	liver
37	chr3:52287600-52293600	Strong transcription	HMEC	breast
38	chr3:52287800-52294600	Strong transcription	Small Intestine	intestine
39	chr3:52287800-52302200	Strong transcription	Lung	lung
40	chr3:52288000-52293200	Strong transcription	Brain Angular Gyrus	brain
41	chr3:52288000-52303400	Strong transcription	Skeletal Muscle Male	skeletal muscle
42	chr3:52288000-52304200	Strong transcription	Muscle Satellite Cultured Cells	--
43	chr3:52288000-52304200	Strong transcription	Rectal Mucosa Donor 31	rectum
44	chr3:52288000-52304400	Genic enhancers	Primary T cells fromperipheralblood	blood
45	chr3:52288000-52305000	Strong transcription	Fetal Brain Female	brain
46	chr3:52288000-52305800	Strong transcription	Fetal Muscle Leg	muscle
47	chr3:52288200-52293200	Strong transcription	Brain Hippocampus Middle	brain
48	chr3:52288200-52293200	Strong transcription	Brain Inferior Temporal Lobe	brain
49	chr3:52288200-52293400	Genic enhancers	Dnd41	blood
50	chr3:52288200-52296000	Strong transcription	Primary neutrophils fromperipheralblood	blood

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