Variant report

Variant	nsv822171
Chromosome Location	chr3:84725662-84726340
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs546157828	chr3:84725669-84725670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs564231202	chr3:84725725-84725726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs368392133	chr3:84725728-84725729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs11918517	chr3:84725747-84725748	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs543525292	chr3:84725827-84725828	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs35385511	chr3:84725867-84725868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs535040403	chr3:84725883-84725884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs373780533	chr3:84725921-84725922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs114363163	chr3:84725935-84725936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs372299881	chr3:84725954-84725955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs11918582	chr3:84725973-84725974	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs539146256	chr3:84726006-84726007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs183291894	chr3:84726012-84726013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs186202369	chr3:84726013-84726014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs58388001	chr3:84726028-84726029	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs9849317	chr3:84726031-84726032	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs569885573	chr3:84726033-84726034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs144358959	chr3:84726055-84726056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs191394133	chr3:84726062-84726063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs555717126	chr3:84726133-84726134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs57306479	chr3:84726185-84726186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs528308644	chr3:84726200-84726201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs9829933	chr3:84726232-84726233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs199897501	chr3:84726249-84726250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs183198574	chr3:84726252-84726253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs540390260	chr3:84726257-84726258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs115060186	chr3:84726282-84726283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs201431075	chr3:84726287-84726288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs544656912	chr3:84726288-84726289	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs539699425	chr3:84726290-84726291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
Medulloblastoma	16783165	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Mental retardation	17124404	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
craniofacial dysmorphism	21918468	CNVD
Schizophrenia	23813976	CNVD
Lung squamous cell carcinoma	22363434	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:84722000-84729800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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