Variant report

Variant	nsv822509
Chromosome Location	chr1:46084979-46089642
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:289)
CpG islands
(count:550)
Chromatin interactive
region (count:16)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:289 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr1:46084961-46085327	GM12878	blood:	n/a	n/a
2	ATF2	chr1:46084692-46085603	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL3	chr1:46082721-46086028	K562	blood:	n/a	n/a
4	BCL3	chr1:46084985-46085669	A549	lung:	n/a	n/a
5	BCL3	chr1:46086106-46086538	A549	lung:	n/a	n/a
6	BHLHE40	chr1:46087970-46088143	K562	blood:	n/a	n/a
7	BRCA1	chr1:46086341-46086346	Hela-S3	cervix:	n/a	n/a
8	CCNT2	chr1:46088273-46088390	K562	blood:	n/a	n/a
9	CCNT2	chr1:46088874-46089132	K562	blood:	n/a	n/a
10	CCNT2	chr1:46084909-46085099	K562	blood:	n/a	n/a
11	CEBPD	chr1:46084463-46085681	K562	blood:	n/a	n/a
12	CHD2	chr1:46085728-46085878	K562	blood:	n/a	n/a
13	CHD2	chr1:46085741-46086000	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr1:46087880-46088030	GM12865	blood:	n/a	n/a
15	CTCF	chr1:46084938-46085004	HepG2	liver:	n/a	n/a
16	CTCF	chr1:46084920-46085070	GM12874	blood:	n/a	n/a
17	CTCF	chr1:46086364-46086412	Fibrobl	skin:	n/a	n/a
18	CTCF	chr1:46084958-46085036	Hela-S3	cervix:	n/a	n/a
19	CTCF	chr1:46084992-46085062	GM12878	blood:	n/a	n/a
20	CTCF	chr1:46086200-46086350	GM12871	blood:	n/a	n/a
21	CTCF	chr1:46084974-46085060	K562	blood:	n/a	n/a
22	CTCF	chr1:46084940-46085090	HPF	lung:	n/a	n/a
23	CTCF	chr1:46085580-46085730	HUVEC	blood vessel:	n/a	n/a
24	CTCF	chr1:46084886-46085157	K562	blood:	n/a	n/a
25	E2F6	chr1:46088013-46088218	K562	blood:	n/a	n/a
26	ELK1	chr1:46086249-46086259	Hela-S3	cervix:	n/a	n/a
27	FOSL2	chr1:46085790-46089950	HepG2	liver:	n/a	n/a
28	FOSL2	chr1:46084711-46085675	HepG2	liver:	n/a	n/a
29	HMGN3	chr1:46088178-46088409	K562	blood:	n/a	n/a
30	HMGN3	chr1:46088708-46089143	K562	blood:	n/a	n/a
31	JUND	chr1:46088420-46088562	H1-hESC	embryonic stem cell:	n/a	n/a
32	JUND	chr1:46084833-46085253	H1-hESC	embryonic stem cell:	n/a	n/a
33	MAX	chr1:46087842-46088282	K562	blood:	n/a	n/a
34	MAZ	chr1:46085807-46085974	HepG2	liver:	n/a	n/a
35	MBD4	chr1:46085137-46085630	HepG2	liver:	n/a	n/a
36	MTA3	chr1:46087329-46087950	GM12878	blood:	n/a	n/a
37	MTA3	chr1:46084557-46087251	GM12878	blood:	n/a	n/a
38	MYBL2	chr1:46084846-46085429	HepG2	liver:	n/a	n/a
39	MYC	chr1:46087038-46087073	HUVEC	blood vessel:	n/a	n/a
40	MYC	chr1:46087077-46087088	HUVEC	blood vessel:	n/a	n/a
41	MYC	chr1:46086923-46086966	HUVEC	blood vessel:	n/a	n/a
42	NFATC1	chr1:46086530-46086978	GM12878	blood:	n/a	n/a
43	NFATC1	chr1:46084863-46085645	GM12878	blood:	n/a	n/a
44	NFATC1	chr1:46086787-46087255	GM12878	blood:	n/a	n/a
45	NFATC1	chr1:46086296-46086686	GM12878	blood:	n/a	n/a
46	NFATC1	chr1:46085262-46085826	GM12878	blood:	n/a	n/a
47	NFE2	chr1:46086995-46087006	GM12878	blood:	n/a	n/a
48	NR2F2	chr1:46087790-46088326	MCF-7	breast:	n/a	n/a
49	NR2F2	chr1:46084635-46085575	K562	blood:	n/a	n/a
50	NR2F2	chr1:46087645-46088267	K562	blood:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:46088336-46088386	HNPCEpiC	eye:	n/a
2	chr1:46088336-46088386	HNPCEpiC	eye:	n/a
3	chr1:46089024-46089074	NH-A	brain:	n/a
4	chr1:46086063-46086113	HNPCEpiC	eye:	n/a
5	chr1:46087792-46087842	HEK293	kidney:	embryo
6	chr1:46089024-46089074	HCF	heart:	n/a
7	chr1:46089024-46089074	HEEpiC	esophagus:	n/a
8	chr1:46088486-46088536	NH-A	brain:	n/a
9	chr1:46086861-46086911	HCM	heart:	n/a
10	chr1:46086861-46086911	HEK293	kidney:	embryo
11	chr1:46086063-46086113	BJ	skin:	n/a
12	chr1:46089045-46089095	HCPEpiC	choroid plexus:	n/a
13	chr1:46088486-46088536	HMEC	breast:	n/a
14	chr1:46089045-46089095	NHBE	bronchial:	n/a
15	chr1:46089045-46089095	NT2-D1	testis:	n/a
16	chr1:46089593-46089643	NHBE	bronchial:	n/a
17	chr1:46088336-46088386	K562	blood:	n/a
18	chr1:46088486-46088536	AG04450	lung:	fetal
19	chr1:46086861-46086911	NB4	blood:	n/a
20	chr1:46086861-46086911	Jurkat	blood:	n/a
21	chr1:46089593-46089643	Hepatocyte	liver:	n/a
22	chr1:46088336-46088386	ProgFib	skin:	n/a
23	chr1:46089045-46089095	BJ	skin:	n/a
24	chr1:46089045-46089095	BE2_C	brain:	n/a
25	chr1:46089593-46089643	HMEC	breast:	n/a
26	chr1:46086861-46086911	H1-hESC	embryonic stem cell:	embryo
27	chr1:46087792-46087842	HAEpiC	amniotic membrane:	n/a
28	chr1:46089024-46089074	HepG2	liver:	n/a
29	chr1:46089024-46089074	PFSK-1	brain:	n/a
30	chr1:46088486-46088536	U87	brain:	n/a
31	chr1:46089045-46089095	U87	brain:	n/a
32	chr1:46087792-46087842	HEEpiC	esophagus:	n/a
33	chr1:46086063-46086113	HUVEC	blood vessel:	n/a
34	chr1:46088336-46088386	HCPEpiC	choroid plexus:	n/a
35	chr1:46088541-46088591	Hepatocyte	liver:	n/a
36	chr1:46089593-46089643	ProgFib	skin:	n/a
37	chr1:46088486-46088536	ProgFib	skin:	n/a
38	chr1:46086861-46086911	IMR90	lung:	fetal
39	chr1:46088486-46088536	HIPEpiC	eye:	n/a
40	chr1:46088336-46088386	Hela-S3	cervix:	n/a
41	chr1:46086063-46086113	HPAEpiC	pulmonary alveolar:	n/a
42	chr1:46086063-46086113	ProgFib	skin:	n/a
43	chr1:46086861-46086911	GM06990	blood:	n/a
44	chr1:46089024-46089074	GM12892	blood:	n/a
45	chr1:46089024-46089074	HIPEpiC	eye:	n/a
46	chr1:46086063-46086113	K562	blood:	n/a
47	chr1:46089045-46089095	Jurkat	blood:	n/a
48	chr1:46088336-46088386	HCM	heart:	n/a
49	chr1:46088486-46088536	GM06990	blood:	n/a
50	chr1:46089045-46089095	Caco-2	colon:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:46082896..46084867-chr1:46088374..46090403,2	MCF-7	breast:
2	chr1:46077501..46079157-chr1:46087359..46089713,2	K562	blood:
3	chr1:46049177..46050779-chr1:46084845..46087660,2	K562	blood:
4	chr1:46077123..46079001-chr1:46087359..46089282,2	K562	blood:
5	chr1:46077998..46080201-chr1:46083457..46085148,2	K562	blood:
6	chr1:45185928..45188614-chr1:46083047..46085498,2	K562	blood:
7	chr1:46076715..46080031-chr1:46084203..46087065,4	K562	blood:
8	chr1:46083627..46085575-chr1:46092823..46094633,2	K562	blood:
9	chr1:46084077..46086305-chr1:46151131..46152894,2	K562	blood:
10	chr1:46085809..46088151-chr1:46093251..46095018,2	MCF-7	breast:
11	chr1:46088002..46091701-chr1:46094509..46096362,4	K562	blood:
12	chr1:46049177..46052526-chr1:46084544..46088171,4	K562	blood:
13	chr1:46048178..46050215-chr1:46089233..46091590,2	K562	blood:
14	chr1:46085998..46087880-chr1:46092475..46094068,2	K562	blood:
15	chr1:45987332..45989335-chr1:46087766..46089426,2	K562	blood:
16	chr1:45965206..45967382-chr1:46084831..46087421,2	K562	blood:

No data

Variant related genes	Relation type
CCDC17	TF binding region
CCDC17	CpG island
ENSG00000132763	chromatin interactions
ENSG00000132780	chromatin interactions
ENSG00000117450	chromatin interactions
ENSG00000159592	chromatin interactions
ENSG00000236624	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000159596	chromatin interactions

Extended variants
information (count: 231 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:231 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192627524	chr1:46085012-46085013	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs76827398	chr1:46085050-46085051	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs539995323	chr1:46085053-46085054	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs371233338	chr1:46085098-46085099	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs571535989	chr1:46085108-46085109	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs1547924	chr1:46085112-46085113	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs557009540	chr1:46085154-46085155	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs569028969	chr1:46085175-46085176	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs539116905	chr1:46085176-46085177	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs536409408	chr1:46085182-46085183	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs557596496	chr1:46085203-46085204	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs139807571	chr1:46085209-46085210	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs200713573	chr1:46085239-46085240	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs77377065	chr1:46085241-46085242	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs372985057	chr1:46085242-46085243	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs368464095	chr1:46085265-46085266	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs78242623	chr1:46085287-46085288	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs1547925	chr1:46085356-46085357	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs533600623	chr1:46085367-46085368	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs144576657	chr1:46085378-46085379	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs577541968	chr1:46085383-46085384	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs541833157	chr1:46085403-46085404	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs554943453	chr1:46085467-46085468	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs184106800	chr1:46085501-46085502	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs188798152	chr1:46085522-46085523	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs560917361	chr1:46085547-46085548	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs35839886	chr1:46085585-46085586	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs574829234	chr1:46085593-46085594	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs2275084	chr1:46085639-46085640	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs116078384	chr1:46085681-46085682	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs150824702	chr1:46085687-46085688	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs532339928	chr1:46085692-46085693	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs550573504	chr1:46085723-46085724	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs75056867	chr1:46085763-46085764	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs368080626	chr1:46085790-46085791	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs2275085	chr1:46085852-46085853	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs2275086	chr1:46085879-46085880	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs566934492	chr1:46085907-46085908	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs369152830	chr1:46085918-46085919	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs374791826	chr1:46085924-46085925	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs368906435	chr1:46085932-46085933	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs554170551	chr1:46085949-46085950	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs200069968	chr1:46086001-46086002	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs558957246	chr1:46086006-46086007	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs147247705	chr1:46086035-46086036	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs142888180	chr1:46086042-46086043	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs373538486	chr1:46086045-46086046	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs373022295	chr1:46086059-46086060	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs148450617	chr1:46086061-46086062	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs577480529	chr1:46086064-46086065	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	17603634	CNVD
Soft tissue tumor	16732325	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic myeloid leukemia	21384125	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Multiple myeloma	16461302	CNVD
Melanoma	17363583	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Uveal melanoma	20484589	CNVD
Ovarian cancer	22174824	CNVD
Muscle-eye-brain disease	21572526	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	20680643	CNVD
Colorectal cancer	19287155	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Schizophrenia	20967226	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:46052800-46086000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:46052800-46089200	Strong transcription	HUES6 Cell Line	embryonic stem cell
3	chr1:46052800-46099400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr1:46053200-46127400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr1:46053600-46086000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
6	chr1:46055000-46085200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
7	chr1:46055200-46090400	Strong transcription	Dnd41	blood
8	chr1:46066800-46086800	Strong transcription	K562	blood
9	chr1:46067000-46086400	Strong transcription	H1 Cell Line	embryonic stem cell
10	chr1:46067200-46086600	Strong transcription	HUES64 Cell Line	embryonic stem cell
11	chr1:46067200-46087400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr1:46067400-46086600	Strong transcription	HUES48 Cell Line	embryonic stem cell
13	chr1:46068000-46086600	Strong transcription	Placenta	Placenta
14	chr1:46068200-46085000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr1:46068200-46086600	Strong transcription	Duodenum Mucosa	Duodenum
16	chr1:46068200-46087000	Strong transcription	Fetal Muscle Trunk	muscle
17	chr1:46068200-46087400	Strong transcription	H9 Cell Line	embryonic stem cell
18	chr1:46068200-46087400	Strong transcription	Fetal Thymus	thymus
19	chr1:46070000-46108200	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr1:46071000-46087400	Strong transcription	Fetal Stomach	stomach
21	chr1:46071200-46093000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
22	chr1:46071600-46087200	Strong transcription	Fetal Muscle Leg	muscle
23	chr1:46071600-46105800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr1:46074600-46087400	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr1:46074800-46108200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr1:46075200-46086400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
27	chr1:46075400-46087400	Strong transcription	Primary hematopoietic stem cells	blood
28	chr1:46075600-46088000	Weak transcription	Fetal Heart	heart
29	chr1:46075600-46088000	Strong transcription	Fetal Intestine Small	intestine
30	chr1:46075800-46087200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr1:46076200-46094000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr1:46077800-46085800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr1:46077800-46086400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr1:46077800-46086400	Strong transcription	Fetal Intestine Large	intestine
35	chr1:46077800-46086600	Strong transcription	Rectal Mucosa Donor 31	rectum
36	chr1:46077800-46088200	Strong transcription	Primary T cells from cord blood	blood
37	chr1:46077800-46090000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr1:46077800-46090200	Strong transcription	Fetal Brain Female	brain
39	chr1:46077800-46112600	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr1:46078000-46085200	Strong transcription	Primary T helper cells fromperipheralblood	blood
41	chr1:46078000-46085200	Strong transcription	A549	lung
42	chr1:46078000-46087600	Strong transcription	Primary monocytes fromperipheralblood	blood
43	chr1:46078200-46085200	Strong transcription	Primary T helper cells PMA-I stimulated	--
44	chr1:46078200-46085400	Strong transcription	Primary T cells fromperipheralblood	blood
45	chr1:46078200-46086400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr1:46078200-46086600	Strong transcription	Liver	Liver
47	chr1:46078200-46086800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
48	chr1:46078200-46090000	Strong transcription	Brain Germinal Matrix	brain
49	chr1:46078200-46101200	Strong transcription	Thymus	Thymus
50	chr1:46078400-46086800	Strong transcription	Brain Cingulate Gyrus	brain

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