No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs371621895 |
chr6:31777774-31777775 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs576949512 |
chr6:31777822-31777823 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs150873641 |
chr6:31777832-31777833 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs370564561 |
chr6:31777841-31777842 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs202159508 |
chr6:31777859-31777860 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs550139982 |
chr6:31777887-31777888 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs377450492 |
chr6:31777907-31777908 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs371226757 |
chr6:31777936-31777937 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs2075800 |
chr6:31777946-31777947 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
10 |
rs201332987 |
chr6:31777957-31777958 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs61751215 |
chr6:31777971-31777972 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs202033031 |
chr6:31777976-31777977 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs144451142 |
chr6:31777993-31777994 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs371717441 |
chr6:31778008-31778009 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs554479408 |
chr6:31778016-31778017 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs139052456 |
chr6:31778018-31778019 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs567637853 |
chr6:31778041-31778042 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs199974706 |
chr6:31778053-31778054 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs566393477 |
chr6:31778076-31778077 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs2227955 |
chr6:31778077-31778078 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs111462391 |
chr6:31778101-31778102 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs146402090 |
chr6:31778107-31778108 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs146531367 |
chr6:31778110-31778111 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs554869938 |
chr6:31778131-31778132 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs201132627 |
chr6:31778144-31778145 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs544006150 |
chr6:31778179-31778180 |
Weak transcription Strong transcription Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs139969031 |
chr6:31778195-31778196 |
Weak transcription Strong transcription Active TSS
|
CpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs148694457 |
chr6:31778219-31778220 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs200301187 |
chr6:31778237-31778238 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs576268420 |
chr6:31778266-31778267 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs2227956 |
chr6:31778272-31778273 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
32 |
rs527582506 |
chr6:31778277-31778278 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs548364201 |
chr6:31778299-31778300 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs532485515 |
chr6:31778313-31778314 |
Weak transcription Strong transcription Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs147667814 |
chr6:31778371-31778372 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs200372086 |
chr6:31778376-31778377 |
Weak transcription Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs201161706 |
chr6:31778432-31778433 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs571792102 |
chr6:31778435-31778436 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs199726010 |
chr6:31778436-31778437 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs367836600 |
chr6:31778458-31778459 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs17853299 |
chr6:31778507-31778508 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs2075799 |
chr6:31778529-31778530 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundancedisease
|
43 |
rs566332175 |
chr6:31778530-31778531 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs372714721 |
chr6:31778539-31778540 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs146348020 |
chr6:31778544-31778545 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs555125949 |
chr6:31778554-31778555 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs139384991 |
chr6:31778558-31778559 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs149424950 |
chr6:31778559-31778560 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs143774785 |
chr6:31778580-31778581 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs141209981 |
chr6:31778587-31778588 |
Weak transcription Strong transcription Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|