Variant report

Variant nsv823691
Chromosome Location chr6:53918427-53978766
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:807 , 50 per page) page: 1 2 3 4 5 6 7 ... 17
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53913600-53918800 Weak transcription Psoas Muscle Psoas
2 chr6:53913600-53926000 Weak transcription Left Ventricle heart
3 chr6:53915600-53918600 Weak transcription Fetal Muscle Leg muscle
4 chr6:53916000-53918800 Weak transcription Right Atrium heart
5 chr6:53916200-53918600 Enhancers Skeletal Muscle Male skeletal muscle
6 chr6:53916400-53918800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr6:53916400-53919200 Enhancers Fetal Heart heart
8 chr6:53917200-53919200 Weak transcription Right Ventricle heart
9 chr6:53917800-53918600 Enhancers HMEC breast
10 chr6:53917800-53918800 Enhancers Hela-S3 cervix
11 chr6:53917800-53919000 Enhancers HSMM muscle
12 chr6:53917800-53919200 Active TSS Skeletal Muscle Female skeletal muscle
13 chr6:53918000-53918600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:53918000-53918600 Enhancers HSMMtube muscle
15 chr6:53918000-53923200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr6:53918200-53918600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr6:53918200-53918800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:53918200-53919000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr6:53918200-53919200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:53918200-53919600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:53918400-53918600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:53918400-53918600 Enhancers NH-A brain
23 chr6:53918400-53918600 Enhancers Osteobl bone
24 chr6:53918400-53918800 Enhancers Muscle Satellite Cultured Cells --
25 chr6:53918400-53918800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:53918400-53918800 Enhancers Colon Smooth Muscle Colon
27 chr6:53918400-53918800 Enhancers NHEK skin
28 chr6:53918400-53919000 Enhancers Duodenum Mucosa Duodenum
29 chr6:53918400-53919000 Enhancers Fetal Intestine Large intestine
30 chr6:53918400-53919000 Enhancers Rectal Mucosa Donor 31 rectum
31 chr6:53918400-53919400 Active TSS Aorta Aorta
32 chr6:53918400-53919600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr6:53918400-53919600 Enhancers Colonic Mucosa Colon
34 chr6:53918400-53919600 Enhancers Fetal Intestine Small intestine
35 chr6:53918600-53918800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr6:53918600-53918800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr6:53918600-53918800 Enhancers Adipose Nuclei Adipose
38 chr6:53918600-53918800 Enhancers Brain Anterior Caudate brain
39 chr6:53918600-53918800 Enhancers Pancreatic Islets Pancreatic Islet
40 chr6:53918600-53918800 Enhancers Fetal Muscle Leg muscle
41 chr6:53918600-53918800 Enhancers Rectal Mucosa Donor 29 rectum
42 chr6:53918600-53918800 Enhancers HUVEC blood vessel
43 chr6:53918600-53918800 Enhancers NHLF lung
44 chr6:53918600-53919000 Enhancers ES-WA7 Cell Line embryonic stem cell
45 chr6:53918600-53919000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:53918600-53919000 Enhancers HUES64 Cell Line embryonic stem cell
47 chr6:53918600-53919000 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr6:53918600-53919000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr6:53918600-53919000 Enhancers Stomach Mucosa stomach
50 chr6:53918600-53919000 Flanking Active TSS HSMMtube muscle

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