Variant report

Variant	nsv824068
Chromosome Location	chr7:38288300-38370429
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:961)
CpG islands
(count:2200)
Chromatin interactive
region (count:42)
LncRNA
region (count:36)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:961 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:38298340-38298378	K562	blood:	n/a	n/a
2	ARID3A	chr7:38333909-38333936	HepG2	liver:	n/a	n/a
3	ATF1	chr7:38296748-38296967	K562	blood:	n/a	n/a
4	ATF1	chr7:38298851-38299117	K562	blood:	n/a	n/a
5	ATF1	chr7:38358478-38358765	K562	blood:	n/a	n/a
6	ATF1	chr7:38332074-38332345	K562	blood:	n/a	n/a
7	ATF1	chr7:38319668-38320070	K562	blood:	n/a	n/a
8	ATF2	chr7:38358345-38358831	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr7:38289493-38289850	GM12878	blood:	n/a	n/a
10	BATF	chr7:38335608-38335962	GM12878	blood:	n/a	n/a
11	BATF	chr7:38305616-38305913	GM12878	blood:	n/a	n/a
12	BATF	chr7:38289510-38289833	GM12878	blood:	n/a	n/a
13	BATF	chr7:38289507-38289847	GM12878	blood:	n/a	n/a
14	BATF	chr7:38335625-38335952	GM12878	blood:	n/a	n/a
15	BATF	chr7:38305659-38305874	GM12878	blood:	n/a	n/a
16	BCL11A	chr7:38335675-38335915	GM12878	blood:	n/a	n/a
17	BCL11A	chr7:38305548-38305926	GM12878	blood:	n/a	n/a
18	BCL11A	chr7:38335645-38335867	GM12878	blood:	n/a	n/a
19	BCL11A	chr7:38305612-38305832	GM12878	blood:	n/a	n/a
20	BCL11A	chr7:38289452-38289744	GM12878	blood:	n/a	chr7:38289640-38289649
21	BCL11A	chr7:38289442-38289823	GM12878	blood:	n/a	chr7:38289640-38289649
22	BHLHE40	chr7:38358558-38358736	K562	blood:	n/a	n/a
23	BHLHE40	chr7:38351349-38351381	GM12878	blood:	n/a	n/a
24	BHLHE40	chr7:38313008-38313126	K562	blood:	n/a	n/a
25	BHLHE40	chr7:38335593-38335955	GM12878	blood:	n/a	n/a
26	BHLHE40	chr7:38351090-38351531	K562	blood:	n/a	n/a
27	BHLHE40	chr7:38339818-38340010	K562	blood:	n/a	n/a
28	BHLHE40	chr7:38330740-38331111	K562	blood:	n/a	n/a
29	BHLHE40	chr7:38330775-38331007	HepG2	liver:	n/a	n/a
30	CBX3	chr7:38350978-38351579	K562	blood:	n/a	n/a
31	CCNT2	chr7:38350861-38351244	K562	blood:	n/a	n/a
32	CEBPB	chr7:38321761-38322047	K562	blood:	n/a	chr7:38321909-38321920
33	CEBPB	chr7:38321770-38322083	HepG2	liver:	n/a	chr7:38321909-38321920
34	CEBPB	chr7:38357963-38358244	ECC-1	luminal epithelium:	n/a	chr7:38358095-38358108
35	CEBPB	chr7:38361024-38361459	IMR90	lung:	n/a	chr7:38361262-38361275
36	CEBPB	chr7:38296681-38297002	K562	blood:	n/a	chr7:38296860-38296873
37	CEBPB	chr7:38358105-38358116	K562	blood:	n/a	n/a
38	CEBPB	chr7:38345755-38346111	MCF-7	breast:	n/a	n/a
39	CEBPB	chr7:38312888-38313596	MCF-7	breast:	n/a	n/a
40	CEBPB	chr7:38350358-38350709	K562	blood:	n/a	chr7:38350562-38350575
41	CEBPB	chr7:38330530-38330719	K562	blood:	n/a	n/a
42	CEBPB	chr7:38357938-38358233	H1-hESC	embryonic stem cell:	n/a	chr7:38358095-38358108
43	CHD1	chr7:38360726-38361756	IMR90	lung:	n/a	n/a
44	CHD2	chr7:38350904-38351511	GM12878	blood:	n/a	n/a
45	CHD2	chr7:38335609-38335922	GM12878	blood:	n/a	n/a
46	CHD2	chr7:38352615-38352643	GM12878	blood:	n/a	n/a
47	CREB1	chr7:38350990-38351447	A549	lung:	n/a	n/a
48	CTCF	chr7:38362200-38362350	AoAF	blood vessel:	n/a	chr7:38362332-38362345
49	CTCF	chr7:38358560-38358710	HUVEC	blood vessel:	n/a	n/a
50	CTCF	chr7:38358540-38358690	HBMEC	blood vessel:	n/a	n/a

(count:2200 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:38347775-38347825	NHDF-neo	bronchial:	n/a
2	chr7:38356729-38356779	GM12878	blood:	n/a
3	chr7:38347775-38347825	NB4	blood:	n/a
4	chr7:38361199-38361249	NHBE	bronchial:	n/a
5	chr7:38347775-38347825	NHDF-neo	bronchial:	n/a
6	chr7:38356729-38356779	GM12878	blood:	n/a
7	chr7:38347775-38347825	NB4	blood:	n/a
8	chr7:38361199-38361249	NHBE	bronchial:	n/a
9	chr7:38351468-38351518	Jurkat	blood:	n/a
10	chr7:38357684-38357734	ECC-1	luminal epithelium:	n/a
11	chr7:38331871-38331921	K562	blood:	n/a
12	chr7:38309984-38310034	NH-A	brain:	n/a
13	chr7:38350464-38350514	NHDF-neo	bronchial:	n/a
14	chr7:38356808-38356858	ProgFib	skin:	n/a
15	chr7:38344983-38345033	AG09309	skin:	n/a
16	chr7:38351094-38351144	IMR90	lung:	fetal
17	chr7:38348929-38348979	RPTEC	kidney:	n/a
18	chr7:38350938-38350988	K562	blood:	n/a
19	chr7:38344934-38344984	ECC-1	luminal epithelium:	n/a
20	chr7:38357684-38357734	HCT-116	colon:	n/a
21	chr7:38351226-38351276	HUVEC	blood vessel:	n/a
22	chr7:38298908-38298958	SK-N-SH	brain:	n/a
23	chr7:38315971-38316021	K562	blood:	n/a
24	chr7:38351154-38351204	HL-60	blood:	n/a
25	chr7:38340103-38340153	BJ	skin:	n/a
26	chr7:38340103-38340153	AG09319	gingival:	n/a
27	chr7:38294113-38294163	BE2_C	brain:	n/a
28	chr7:38357047-38357097	HPAEpiC	pulmonary alveolar:	n/a
29	chr7:38315971-38316021	ECC-1	luminal epithelium:	n/a
30	chr7:38356865-38356915	LNCaP	prostate:	n/a
31	chr7:38344983-38345033	T-47D	breast:	n/a
32	chr7:38298908-38298958	LNCaP	prostate:	n/a
33	chr7:38296393-38296443	RPTEC	kidney:	n/a
34	chr7:38348929-38348979	HPAEpiC	pulmonary alveolar:	n/a
35	chr7:38312366-38312416	AG04449	skin:	fetal
36	chr7:38351468-38351518	IMR90	lung:	fetal
37	chr7:38298908-38298958	HMEC	breast:	n/a
38	chr7:38294113-38294163	AG10803	skin:	n/a
39	chr7:38316654-38316704	BE2_C	brain:	n/a
40	chr7:38356808-38356858	GM12891	blood:	n/a
41	chr7:38331753-38331803	SK-N-MC	brain:	n/a
42	chr7:38351226-38351276	HPAEpiC	pulmonary alveolar:	n/a
43	chr7:38298966-38299016	CMK	blood:	n/a
44	chr7:38351226-38351276	HEEpiC	esophagus:	n/a
45	chr7:38340103-38340153	ovcar-3	ovarian:	n/a
46	chr7:38344934-38344984	AoSMC	blood vessel:	n/a
47	chr7:38315971-38316021	PrEC	prostate:	n/a
48	chr7:38344455-38344505	MCF-7	breast:	n/a
49	chr7:38356865-38356915	HCF	heart:	n/a
50	chr7:38361199-38361249	A549	lung:	n/a

(count:42 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:38329299..38330977-chr7:38349932..38352366,2	K562	blood:
2	chr7:38316692..38319374-chr7:38324142..38325804,2	MCF-7	breast:
3	chr7:38369534..38372460-chr7:38378778..38381886,3	K562	blood:
4	chr7:38312675..38315674-chr7:38326850..38329772,2	K562	blood:
5	chr7:38350441..38353889-chr7:38368470..38373744,5	K562	blood:
6	chr7:38365694..38367640-chr7:38368298..38369847,2	K562	blood:
7	chr7:38316692..38319374-chr7:38324142..38325804,2	MCF-7	breast:
8	chr7:38338259..38344316-chr7:38349234..38354817,8	K562	blood:
9	chr5:139487048..139487856-chr7:38339265..38339924,2	NB4	blood:
10	chr7:38337293..38339358-chr7:38341457..38343029,2	K562	blood:
11	chr7:38350441..38353889-chr7:38368470..38373744,5	K562	blood:
12	chr7:38301028..38303453-chr7:38304151..38306717,2	K562	blood:
13	chr7:38322069..38325279-chr7:38325414..38329966,4	K562	blood:
14	chr6:31583767..31584372-chr7:38349943..38350554,2	NB4	blood:
15	chr7:38320521..38322943-chr7:38347615..38349997,2	K562	blood:
16	chr7:38145396..38146142-chr7:38358527..38359113,2	MCF-7	breast:
17	chr7:38342202..38344316-chr7:38351382..38353535,2	K562	blood:
18	chr11:93474211..93474958-chr7:38350865..38351599,2	NB4	blood:
19	chr19:47892610..47893302-chr7:38314653..38315604,2	NB4	blood:
20	chr7:38325300..38328102-chr7:38356981..38359031,2	K562	blood:
21	chr7:38272138..38275044-chr7:38351799..38354206,2	K562	blood:
22	chr7:38337293..38339358-chr7:38341457..38343029,2	K562	blood:
23	chr5:150068580..150069370-chr7:38338298..38339028,2	NB4	blood:
24	chr7:38309718..38312267-chr7:38320422..38323270,2	MCF-7	breast:
25	chr7:38338259..38341713-chr7:38349234..38353582,4	K562	blood:
26	chr7:38333908..38338085-chr7:38338653..38341388,3	K562	blood:
27	chr7:38338259..38341713-chr7:38349234..38353582,4	K562	blood:
28	chr7:38369664..38372472-chr7:38373590..38376789,3	K562	blood:
29	chr7:38350491..38353138-chr7:38373860..38375500,2	K562	blood:
30	chr7:38320521..38322943-chr7:38347615..38349997,2	K562	blood:
31	chr7:38333908..38338085-chr7:38338653..38341388,3	K562	blood:
32	chr7:38338259..38344316-chr7:38349234..38354817,8	K562	blood:
33	chr7:38350855..38351410-chr9:4679053..4679680,2	NB4	blood:
34	chr7:37940728..37941537-chr7:38358496..38359055,2	MCF-7	breast:
35	chr7:38309718..38312267-chr7:38320422..38323270,2	MCF-7	breast:
36	chr7:38327903..38329443-chr7:38331082..38333824,2	MCF-7	breast:
37	chr7:38357958..38360447-chr7:38360808..38363317,4	K562	blood:
38	chr7:38322069..38325279-chr7:38325414..38329966,4	K562	blood:
39	chr7:38350491..38352001-chr7:38373860..38376555,2	K562	blood:
40	chr7:38268526..38271338-chr7:38351636..38353674,2	K562	blood:
41	chr7:38342202..38344316-chr7:38351382..38353535,2	K562	blood:
42	chr7:38357958..38360447-chr7:38360808..38363317,4	K562	blood:

(count:36 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AMPH-10	chr7:38295939-38295993	NONHSAT120166
2	lnc-AMPH-10	chr7:38289105-38289173	NONHSAT120161
3	lnc-AMPH-10	chr7:38295939-38296001	NONHSAT120167
4	lnc-STARD3NL-1	chr7:38352147-38352253	ucscGeneNc_uc003tgp_1
5	lnc-AMPH-2	chr7:38344265-38344378	NONHSAT120173
6	lnc-STARD3NL-1	chr7:38356472-38356576	ucscGeneNc_uc003tgp_1
7	lnc-AMPH-10	chr7:38292981-38293025	NONHSAT120162
8	lnc-AMPH-2	chr7:38343487-38343773	NONHSAT120173
9	lnc-AMPH-10	chr7:38292981-38293028	NONHSAT120161
10	lnc-AMPH-2	chr7:38344265-38345247	ENSG00000244971
11	lnc-AMPH-2	chr7:38343487-38343773	ENSG00000244971
12	lnc-AMPH-2	chr7:38342383-38343224	ENSG00000244971
13	lnc-AMPH-10	chr7:38289106-38289173	NONHSAT120167
14	lnc-AMPH-10	chr7:38356605-38356709	NONHSAT120166
15	lnc-AMPH-10	chr7:38310790-38310903	ucscGeneNc_uc003tgm_1
16	lnc-AMPH-10	chr7:38356621-38356709	NONHSAT120162
17	lnc-AMPH-10	chr7:38293236-38293239	NONHSAT120162
18	lnc-AMPH-6	chr7:38365671-38367234	ENSG00000272908.1
19	lnc-AMPH-10	chr7:38310012-38310298	ucscGeneNc_uc003tgm_1
20	lnc-AMPH-10	chr7:38356616-38356709	NONHSAT120169
21	lnc-AMPH-10	chr7:38305211-38305279	NONHSAT120169
22	lnc-AMPH-7	chr7:38362047-38362331	NONHSAT120176
23	lnc-STARD3NL-1	chr7:38347741-38347925	ucscGeneNc_uc003tgp_1
24	lnc-AMPH-10	chr7:38289105-38289173	NONHSAT120162
25	lnc-AMPH-10	chr7:38356623-38356709	NONHSAT120170
26	lnc-AMPH-10	chr7:38356621-38356709	NONHSAT120161
27	lnc-AMPH-2	chr7:38342349-38343224	NONHSAT120173
28	lnc-AMPH-10	chr7:38313188-38313242	NONHSAT120170
29	lnc-AMPH-9	chr7:38305937-38306406	ucscGeneNc_uc003tgl_1
30	lnc-AMPH-10	chr7:38356622-38356709	NONHSAT120167
31	lnc-AMPH-10	chr7:38308874-38309749	ucscGeneNc_uc003tgm_1
32	lnc-AMPH-8	chr7:38335364-38335834	NONHSAT120172
33	lnc-AMPH-10	chr7:38289106-38289173	NONHSAT120166
34	lnc-AMPH-10	chr7:38313188-38313238	NONHSAT120169
35	lnc-AMPH-10	chr7:38305211-38305279	NONHSAT120170
36	lnc-AMPH-6	chr7:38368841-38369244	ENSG00000272908.1

No data

Variant related genes	Relation type
TRGC2	TF binding region
TRGC1	TF binding region
ENSG00000272908	TF binding region
TRGVB	TF binding region
TRGJP	TF binding region
TRGJP1	TF binding region
TRGJ1	TF binding region
TRGVA	TF binding region
TRGJP2	TF binding region
TRGV10	TF binding region
TRGV11	TF binding region
TRGJ2	TF binding region
ENSG00000231916	TF binding region
TRGV9	TF binding region
TRGC2	CpG island
TRGC1	CpG island
ENSG00000272908	CpG island
TRGVB	CpG island
TRGJP	CpG island
TRGJP1	CpG island
TRGJ1	CpG island
TRGVA	CpG island
TRGJP2	CpG island
TRGV10	CpG island
TRGV11	CpG island
TRGJ2	CpG island
ENSG00000231916	CpG island
TRGV9	CpG island
ENSG00000211689	chromatin interactions
ENSG00000211696	chromatin interactions
ENSG00000225992	chromatin interactions
ENSG00000211695	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000273061	chromatin interactions
ENSG00000211694	chromatin interactions
ENSG00000231202	chromatin interactions
ENSG00000245146	chromatin interactions
ENSG00000211691	chromatin interactions
ENSG00000226212	chromatin interactions
ENSG00000231916	chromatin interactions
ENSG00000249978	chromatin interactions
ENSG00000204472	chromatin interactions
ENSG00000211693	chromatin interactions
ENSG00000106993	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000272908	chromatin interactions
ENSG00000185129	chromatin interactions
PTEN	miRNA target sites

Extended variants
information (count: 3713 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:3713 , 50 per page) page: 1 2 3 4 5 6 7 ... 75

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528523998	chr7:38288316-38288317	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs538631566	chr7:38288342-38288343	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs184874557	chr7:38288362-38288363	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs13228253	chr7:38288373-38288374	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs544893027	chr7:38288380-38288381	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs188103290	chr7:38288411-38288412	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs371885644	chr7:38288419-38288420	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs574994828	chr7:38288435-38288436	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs539923581	chr7:38288465-38288466	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs560172203	chr7:38288524-38288525	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs532281669	chr7:38288603-38288604	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs148089439	chr7:38288650-38288651	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs562519252	chr7:38288651-38288652	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs531593185	chr7:38288662-38288663	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs143025458	chr7:38288722-38288723	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs561702682	chr7:38288752-38288753	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs180912275	chr7:38288799-38288800	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs547309589	chr7:38288811-38288812	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs35633605	chr7:38288816-38288817	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs139030834	chr7:38288820-38288821	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs58176718	chr7:38288831-38288832	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs183946796	chr7:38288843-38288844	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs189460568	chr7:38288879-38288880	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs142126157	chr7:38288884-38288885	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs371195969	chr7:38288891-38288892	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs373192979	chr7:38288907-38288908	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs575061247	chr7:38288919-38288920	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs534390184	chr7:38288937-38288938	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs377471612	chr7:38288944-38288945	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs370472433	chr7:38288948-38288949	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs267601507	chr7:38288954-38288955	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs182225167	chr7:38288977-38288978	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs368261350	chr7:38289016-38289017	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs371266359	chr7:38289024-38289025	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs375176075	chr7:38289031-38289032	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs374359440	chr7:38289041-38289042	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs1053759	chr7:38289054-38289055	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs368796657	chr7:38289056-38289057	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs1053758	chr7:38289058-38289059	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs186898919	chr7:38289068-38289069	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs147430032	chr7:38289085-38289086	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs71546638	chr7:38289106-38289107	Weak transcription Active TSS Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
43	rs1053756	chr7:38289121-38289122	Weak transcription Active TSS Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
44	rs371504189	chr7:38289154-38289155	Weak transcription Active TSS Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
45	rs527629283	chr7:38289168-38289169	Weak transcription Active TSS Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
46	rs547566521	chr7:38289188-38289189	Weak transcription Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs149905027	chr7:38289233-38289234	Weak transcription Active TSS Genic enhancers Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs143849539	chr7:38289234-38289235	Weak transcription Active TSS Genic enhancers Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs113653715	chr7:38289240-38289241	Weak transcription Active TSS Genic enhancers Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs532429386	chr7:38289264-38289265	Weak transcription Active TSS Genic enhancers Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Prostate cancer	18632612	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute myeloid leukemia	17237825	CNVD
Breast cancer	17899364	CNVD
Breast cancer	20409316	CNVD
Acute monocytic leukemia	16498392	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	19455253	CNVD
Glioblastoma multiforme	22286061	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Sezary syndrome	18413736	CNVD
Gastric cancer	24379144	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Schizophrenia	23813976	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Cancer	20164919	CNVD
Neuroblastoma	19536264	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1042 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38273800-38292200	Weak transcription	Thymus	Thymus
2	chr7:38273800-38305400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr7:38276800-38295600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr7:38277600-38292600	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr7:38277600-38292600	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr7:38278000-38290800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr7:38283600-38289200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr7:38283800-38289400	Strong transcription	Dnd41	blood
9	chr7:38288000-38296200	Weak transcription	Fetal Thymus	thymus
10	chr7:38288200-38289000	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr7:38288200-38289200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr7:38288200-38290400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr7:38288200-38290400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr7:38288200-38292600	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr7:38288200-38292600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr7:38288200-38295600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr7:38288200-38297000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr7:38288200-38311200	Weak transcription	Primary T cells from cord blood	blood
19	chr7:38289000-38293600	Active TSS	Primary T cells fromperipheralblood	blood
20	chr7:38289200-38290000	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr7:38289200-38290400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
22	chr7:38289400-38289600	Weak transcription	Dnd41	blood
23	chr7:38289600-38290800	Genic enhancers	Dnd41	blood
24	chr7:38290000-38293400	Weak transcription	Monocytes-CD14+_RO01746	blood
25	chr7:38290400-38290800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
26	chr7:38290400-38290800	Transcr. at gene 5' and 3'	Primary Natural Killer cells fromperipheralblood	blood
27	chr7:38290400-38292800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
28	chr7:38290800-38291400	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
29	chr7:38290800-38291400	Enhancers	Dnd41	blood
30	chr7:38291400-38291800	Transcr. at gene 5' and 3'	Primary Natural Killer cells fromperipheralblood	blood
31	chr7:38291400-38291800	Flanking Active TSS	Dnd41	blood
32	chr7:38291800-38292400	Active TSS	Dnd41	blood
33	chr7:38291800-38293400	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
34	chr7:38292200-38292600	Active TSS	Thymus	Thymus
35	chr7:38292400-38292800	Flanking Active TSS	Dnd41	blood
36	chr7:38292600-38292800	Flanking Active TSS	Thymus	Thymus
37	chr7:38292600-38293000	Active TSS	Primary T helper naive cells from peripheral blood	blood
38	chr7:38292600-38293000	Active TSS	Primary T helper cells PMA-I stimulated	--
39	chr7:38292600-38296200	Enhancers	Primary neutrophils fromperipheralblood	blood
40	chr7:38292800-38293200	Active TSS	Dnd41	blood
41	chr7:38293400-38293600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr7:38293400-38293600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
43	chr7:38293400-38294200	Enhancers	Monocytes-CD14+_RO01746	blood
44	chr7:38293600-38294200	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
45	chr7:38293600-38294800	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr7:38293600-38298000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr7:38294200-38295400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
48	chr7:38294200-38295600	Weak transcription	Monocytes-CD14+_RO01746	blood
49	chr7:38294800-38296000	Active TSS	Primary T cells fromperipheralblood	blood
50	chr7:38295400-38302600	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood

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