Variant report

Variant	nsv824493
Chromosome Location	chr8:3796514-3797710
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 102 )
Associated
traits (count: 125 )

Variant overlapped rSNPs/rCNVs (count:102 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs149658919	chr8:3796522-3796523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs529855205	chr8:3796531-3796532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs558845400	chr8:3796532-3796533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs147771981	chr8:3796537-3796538	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs538087764	chr8:3796569-3796570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs189845584	chr8:3796572-3796573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs574644523	chr8:3796583-3796584	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs2627527	chr8:3796585-3796586	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs560543212	chr8:3796589-3796590	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs549746539	chr8:3796603-3796604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs112473570	chr8:3796625-3796626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs182108835	chr8:3796634-3796635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs185700890	chr8:3796648-3796649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs2688305	chr8:3796650-3796651	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs368719305	chr8:3796663-3796664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564840583	chr8:3796665-3796666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs531909578	chr8:3796671-3796672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs550402834	chr8:3796681-3796682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs115216969	chr8:3796686-3796687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs2627526	chr8:3796698-3796699	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs547905896	chr8:3796718-3796719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566212486	chr8:3796724-3796725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs146954648	chr8:3796726-3796727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs117235798	chr8:3796733-3796734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs141531474	chr8:3796773-3796774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs190418999	chr8:3796790-3796791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs537759082	chr8:3796797-3796798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs577291899	chr8:3796800-3796801	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs556463047	chr8:3796801-3796802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs117645347	chr8:3796820-3796821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs535623288	chr8:3796823-3796824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs554342556	chr8:3796824-3796825	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs376586543	chr8:3796839-3796840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs572563874	chr8:3796860-3796861	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs546226163	chr8:3796873-3796874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs181312051	chr8:3796894-3796895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs576347298	chr8:3796913-3796914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs565641344	chr8:3796922-3796923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs543778123	chr8:3796931-3796932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs562018622	chr8:3796933-3796934	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs185135323	chr8:3796939-3796940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs534470843	chr8:3796945-3796946	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs541215219	chr8:3796950-3796951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs554386229	chr8:3796958-3796959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs189939638	chr8:3796959-3796960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs552206966	chr8:3796964-3796965	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs570367938	chr8:3796972-3796973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs531308906	chr8:3796976-3796977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs550126194	chr8:3797020-3797021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs568345857	chr8:3797038-3797039	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:125)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Breast cancer	21364760	CNVD
Cancer	20164920	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21829676	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Prostate cancer	17217626	CNVD
Developmental delay	19128483	CNVD
Neuroticism	17667963	CNVD
Leukoplakia	24403051	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	22014273	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Chronic myeloid leukemia	21384125	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:3794200-3810000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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