Variant report

Variant	nsv824597
Chromosome Location	chr8:36075478-36079997
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 155 )
Associated
traits (count: 115 )

Variant overlapped rSNPs/rCNVs (count:155 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs574527149	chr8:36075486-36075487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs186991517	chr8:36075489-36075490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs563423526	chr8:36075519-36075520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs192724927	chr8:36075532-36075533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs149768564	chr8:36075536-36075537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs550150737	chr8:36075553-36075554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs372294699	chr8:36075594-36075595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs565385779	chr8:36075613-36075614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs532616254	chr8:36075623-36075624	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs56266767	chr8:36075632-36075633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs182725158	chr8:36075651-36075652	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566305273	chr8:36075658-36075659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs536428457	chr8:36075671-36075672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548911961	chr8:36075719-36075720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs570207887	chr8:36075756-36075757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537061777	chr8:36075779-36075780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs145724045	chr8:36075812-36075813	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs531733513	chr8:36075855-36075856	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs576554879	chr8:36075856-36075857	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs534441220	chr8:36075885-36075886	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs552638548	chr8:36075891-36075892	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs16884736	chr8:36075940-36075941	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs375495494	chr8:36076144-36076145	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs633957	chr8:36076164-36076165	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs633909	chr8:36076204-36076205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs368176537	chr8:36076233-36076234	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs200951814	chr8:36076265-36076266	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs541653458	chr8:36076278-36076279	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs550156951	chr8:36076285-36076286	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs648999	chr8:36076360-36076361	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs563600150	chr8:36076362-36076363	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs648975	chr8:36076367-36076368	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs200840113	chr8:36076426-36076427	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs577593616	chr8:36076429-36076430	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs117402251	chr8:36076438-36076439	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs370786230	chr8:36076452-36076453	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs141390062	chr8:36076453-36076454	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs370177479	chr8:36076466-36076467	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs148954436	chr8:36076514-36076515	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs565250359	chr8:36076568-36076569	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs201853532	chr8:36076576-36076577	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs547945744	chr8:36076577-36076578	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs559583637	chr8:36076584-36076585	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs187845788	chr8:36076659-36076660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs79152113	chr8:36076662-36076663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs372031793	chr8:36076674-36076675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs570344892	chr8:36076716-36076717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs144339297	chr8:36076747-36076748	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs193126372	chr8:36076750-36076751	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs568755211	chr8:36076779-36076780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:115)

Disease	PMID	Source
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Multiple myeloma	16616336	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	21806811	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hepatocellular carcinoma	16750200	CNVD
Bladder cancer	19088036	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	20459607	CNVD
Renal cell carcinoma	18765545	CNVD
Colorectal cancer	16912164	CNVD
Neuroticism	17667963	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	17001308	CNVD
Breast cancer	17157792	CNVD
Cancer	17001308	CNVD
Cancer	18840272	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	18382360	CNVD
Ductal carcinoma	18381933	CNVD
Breast cancer	21328542	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Intellectual disability	22045946	CNVD
Lung cancer	17925434	CNVD
Uveal melanoma	20484589	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21364760	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21785460	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:36072600-36075800	Weak transcription	Adipose Nuclei	Adipose
2	chr8:36075800-36076600	Enhancers	Adipose Nuclei	Adipose
3	chr8:36076600-36078600	Weak transcription	Adipose Nuclei	Adipose
4	chr8:36077400-36077800	Enhancers	Fetal Muscle Leg	muscle
5	chr8:36078400-36078800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr8:36078600-36079400	Enhancers	Adipose Nuclei	Adipose
7	chr8:36078600-36079600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links