Variant report

Variant	nsv824659
Chromosome Location	chr8:61586207-61596149
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:800)
CpG islands
(count:977)
Chromatin interactive
region (count:31)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:800 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:61593545-61594034	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:61590920-61591120	HepG2	liver:	n/a	n/a
3	BACH1	chr8:61591471-61591593	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr8:61590482-61590769	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr8:61592278-61592518	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCL11A	chr8:61588907-61589211	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCLAF1	chr8:61590827-61591194	GM12878	blood:	n/a	chr8:61590872-61590881 chr8:61591105-61591114 chr8:61590987-61591000
8	BCLAF1	chr8:61590647-61591239	GM12878	blood:	n/a	chr8:61590872-61590881 chr8:61591105-61591114 chr8:61590987-61591000
9	BHLHE40	chr8:61591029-61591114	K562	blood:	n/a	n/a
10	BHLHE40	chr8:61590963-61591612	GM12878	blood:	n/a	chr8:61590997-61591013 chr8:61591549-61591565 chr8:61590992-61591008
11	BHLHE40	chr8:61591969-61592133	GM12878	blood:	n/a	n/a
12	BHLHE40	chr8:61591945-61592141	K562	blood:	n/a	n/a
13	BRCA1	chr8:61591591-61591640	H1-hESC	embryonic stem cell:	n/a	n/a
14	BRCA1	chr8:61592639-61592724	H1-hESC	embryonic stem cell:	n/a	n/a
15	BRCA1	chr8:61591024-61591101	H1-hESC	embryonic stem cell:	n/a	n/a
16	CBX3	chr8:61588541-61588947	K562	blood:	n/a	n/a
17	CCNT2	chr8:61590709-61593275	K562	blood:	n/a	chr8:61592658-61592667 chr8:61592537-61592546
18	CEBPB	chr8:61593762-61594078	HepG2	liver:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
19	CEBPB	chr8:61591028-61591229	A549	lung:	n/a	n/a
20	CEBPB	chr8:61593737-61594064	HepG2	liver:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
21	CEBPB	chr8:61590398-61591278	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr8:61591022-61591278	IMR90	lung:	n/a	n/a
23	CEBPB	chr8:61593705-61594101	A549	lung:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
24	CEBPB	chr8:61591030-61591201	K562	blood:	n/a	n/a
25	CEBPB	chr8:61590998-61591209	HepG2	liver:	n/a	n/a
26	CEBPB	chr8:61593560-61594094	Hela-S3	cervix:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
27	CEBPB	chr8:61593697-61594061	K562	blood:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
28	CEBPB	chr8:61593610-61594101	H1-hESC	embryonic stem cell:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
29	CEBPB	chr8:61593769-61593979	HepG2	liver:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
30	CEBPB	chr8:61593713-61594098	K562	blood:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
31	CEBPB	chr8:61593716-61594081	HepG2	liver:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
32	CEBPB	chr8:61593733-61594071	MCF-7	breast:	n/a	chr8:61593899-61593908 chr8:61593897-61593908
33	CEBPD	chr8:61591783-61592204	HepG2	liver:	n/a	n/a
34	CEBPD	chr8:61590776-61591114	HepG2	liver:	n/a	n/a
35	CHD1	chr8:61593535-61593722	GM12878	blood:	n/a	n/a
36	CHD1	chr8:61592732-61592801	GM12878	blood:	n/a	n/a
37	CHD1	chr8:61591420-61591608	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD1	chr8:61591991-61592027	H1-hESC	embryonic stem cell:	n/a	n/a
39	CHD1	chr8:61590516-61591058	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD1	chr8:61592038-61592047	GM12878	blood:	n/a	n/a
41	CHD1	chr8:61593040-61593876	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD1	chr8:61592469-61592682	H1-hESC	embryonic stem cell:	n/a	chr8:61592652-61592662 chr8:61592562-61592572
43	CHD2	chr8:61590820-61592056	Hela-S3	cervix:	n/a	n/a
44	CHD2	chr8:61592452-61592468	K562	blood:	n/a	n/a
45	CHD2	chr8:61590743-61590919	HepG2	liver:	n/a	n/a
46	CHD2	chr8:61592625-61592653	H1-hESC	embryonic stem cell:	n/a	n/a
47	CHD2	chr8:61592554-61592733	HepG2	liver:	n/a	chr8:61592652-61592662 chr8:61592562-61592572
48	CHD2	chr8:61592026-61592031	GM12878	blood:	n/a	n/a
49	CHD2	chr8:61591531-61591656	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD2	chr8:61590828-61590843	K562	blood:	n/a	n/a

(count:977 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:61592088-61592138	HRPEpiC	eye:	n/a
2	chr8:61592088-61592138	HRPEpiC	eye:	n/a
3	chr8:61592088-61592138	PFSK-1	brain:	n/a
4	chr8:61592088-61592138	BJ	skin:	n/a
5	chr8:61590718-61590768	AG09309	skin:	n/a
6	chr8:61591939-61591989	AG04450	lung:	fetal
7	chr8:61591199-61591249	HUVEC	blood vessel:	n/a
8	chr8:61590651-61590701	HNPCEpiC	eye:	n/a
9	chr8:61592727-61592777	HCPEpiC	choroid plexus:	n/a
10	chr8:61593040-61593090	HEEpiC	esophagus:	n/a
11	chr8:61590588-61590638	GM12878	blood:	n/a
12	chr8:61592088-61592138	SK-N-SH	brain:	n/a
13	chr8:61591939-61591989	GM19239	blood:	n/a
14	chr8:61591199-61591249	HRCEpiC	kidney:	n/a
15	chr8:61591204-61591254	K562	blood:	n/a
16	chr8:61593179-61593229	HRCEpiC	kidney:	n/a
17	chr8:61592088-61592138	LNCaP	prostate:	n/a
18	chr8:61588587-61588637	MCF-7	breast:	n/a
19	chr8:61593179-61593229	HNPCEpiC	eye:	n/a
20	chr8:61593179-61593229	Hepatocyte	liver:	n/a
21	chr8:61592088-61592138	PANC-1	pancreas:	n/a
22	chr8:61593040-61593090	HPAEpiC	pulmonary alveolar:	n/a
23	chr8:61591398-61591448	A549	lung:	n/a
24	chr8:61590588-61590638	Caco-2	colon:	n/a
25	chr8:61590651-61590701	U87	brain:	n/a
26	chr8:61591204-61591254	HMEC	breast:	n/a
27	chr8:61591436-61591486	NHBE	bronchial:	n/a
28	chr8:61588587-61588637	A549	lung:	n/a
29	chr8:61591461-61591511	Caco-2	colon:	n/a
30	chr8:61591939-61591989	HL-60	blood:	n/a
31	chr8:61591199-61591249	Jurkat	blood:	n/a
32	chr8:61590588-61590638	MCF10A-Er-Src	breast:	n/a
33	chr8:61593179-61593229	HIPEpiC	eye:	n/a
34	chr8:61592088-61592138	AG09309	skin:	n/a
35	chr8:61590588-61590638	Jurkat	blood:	n/a
36	chr8:61593179-61593229	NT2-D1	testis:	n/a
37	chr8:61592727-61592777	PFSK-1	brain:	n/a
38	chr8:61593696-61593746	LNCaP	prostate:	n/a
39	chr8:61592727-61592777	HL-60	blood:	n/a
40	chr8:61593040-61593090	HL-60	blood:	n/a
41	chr8:61591398-61591448	SKMC	muscle:	n/a
42	chr8:61592727-61592777	HIPEpiC	eye:	n/a
43	chr8:61591199-61591249	NB4	blood:	n/a
44	chr8:61590588-61590638	PFSK-1	brain:	n/a
45	chr8:61591204-61591254	NHDF-neo	bronchial:	n/a
46	chr8:61591204-61591254	AoSMC	blood vessel:	n/a
47	chr8:61592088-61592138	IMR90	lung:	fetal
48	chr8:61592727-61592777	HepG2	liver:	n/a
49	chr8:61590651-61590701	A549	lung:	n/a
50	chr8:61592088-61592138	A549	lung:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:61595844..61597847-chr8:61600108..61602179,3	MCF-7	breast:
2	chr8:61582013..61586353-chr8:61586778..61592648,6	K562	blood:
3	chr8:61592791..61594650-chr8:61754871..61757414,2	K562	blood:
4	chr8:61592636..61594603-chr8:61965419..61967444,2	MCF-7	breast:
5	chr8:61571937..61573571-chr8:61588900..61590755,2	MCF-7	breast:
6	chr8:61594133..61596295-chr8:61945003..61948640,3	K562	blood:
7	chr8:61573400..61576268-chr8:61584203..61586295,2	MCF-7	breast:
8	chr8:61428381..61431496-chr8:61588452..61591900,3	K562	blood:
9	chr8:61595659..61597988-chr8:61649091..61651205,2	MCF-7	breast:
10	chr8:61590644..61591624-chrX:119737473..119738364,2	Hela-S3	cervix:
11	chr11:72463368..72463911-chr8:61592033..61592792,2	Hela-S3	cervix:
12	chr2:3605843..3606568-chr8:61590788..61591308,2	Hela-S3	cervix:
13	chr8:61564434..61565085-chr8:61591483..61592116,2	Hela-S3	cervix:
14	chr8:61429468..61431258-chr8:61590540..61592110,2	MCF-7	breast:
15	chr8:61596105..61598331-chr8:61606151..61608898,3	MCF-7	breast:
16	chr8:61562515..61568989-chr8:61586860..61594946,37	MCF-7	breast:
17	chr8:61595542..61601111-chr8:61606456..61610511,8	K562	blood:
18	chr8:61594274..61596445-chr8:61605915..61607443,2	MCF-7	breast:
19	chr8:61563005..61568398-chr8:61588453..61593214,14	K562	blood:
20	chr8:61586135..61588890-chr8:61597344..61600255,2	MCF-7	breast:
21	chr8:61562679..61568216-chr8:61588453..61593754,19	K562	blood:
22	chr16:20911706..20912684-chr8:61590659..61591241,2	Hela-S3	cervix:
23	chr8:61571219..61575228-chr8:61591571..61593615,3	MCF-7	breast:
24	chr8:61559343..61568621-chr8:61588061..61597189,35	MCF-7	breast:
25	chr8:61583235..61586503-chr8:61589207..61592579,5	K562	blood:
26	chr21:44846628..44847190-chr8:61592028..61592852,2	Hela-S3	cervix:
27	chr8:61590410..61592571-chr8:61654156..61656255,3	MCF-7	breast:
28	chr8:61594018..61597231-chr8:61607679..61611092,4	K562	blood:
29	chr8:59570989..59573111-chr8:61592746..61594650,2	MCF-7	breast:
30	chr8:61558670..61560650-chr8:61587707..61590411,2	K562	blood:
31	chr15:51872226..51872785-chr8:61590656..61591256,2	NB4	blood:

No data

Variant related genes	Relation type
CHD7	TF binding region
CHD7	CpG island
ENSG00000254869	chromatin interactions
ENSG00000234171	chromatin interactions
ENSG00000251396	chromatin interactions
ENSG00000035681	chromatin interactions
ENSG00000255289	chromatin interactions
ENSG00000188215	chromatin interactions
ENSG00000186635	chromatin interactions
ENSG00000142178	chromatin interactions
ENSG00000171865	chromatin interactions
ENSG00000232119	chromatin interactions
ENSG00000102897	chromatin interactions
ENSG00000104388	chromatin interactions
ENSG00000171316	chromatin interactions

Extended variants
information (count: 303 )
Associated
traits (count: 103 )

Variant overlapped rSNPs/rCNVs (count:303 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs618190	chr8:61586261-61586262	Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs550754109	chr8:61586297-61586298	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs150869362	chr8:61586299-61586300	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs533435484	chr8:61586381-61586382	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs139423151	chr8:61586391-61586392	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs551498554	chr8:61586443-61586444	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs144541115	chr8:61586444-61586445	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs368452265	chr8:61586490-61586491	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs533908082	chr8:61586506-61586507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs555683066	chr8:61586566-61586567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs567580686	chr8:61586612-61586613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs372705543	chr8:61586642-61586643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs538054028	chr8:61586697-61586698	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs199846981	chr8:61586722-61586723	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs559059110	chr8:61586727-61586728	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs528104801	chr8:61586767-61586768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs556691049	chr8:61586841-61586842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs190609245	chr8:61586863-61586864	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs545918754	chr8:61586874-61586875	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs36028138	chr8:61586875-61586876	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs200020006	chr8:61586890-61586891	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs375907955	chr8:61586948-61586949	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs572923801	chr8:61586960-61586961	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs540224156	chr8:61586997-61586998	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs200925038	chr8:61587034-61587035	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs551124739	chr8:61587140-61587141	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs111463481	chr8:61587256-61587257	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs35807850	chr8:61587257-61587258	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs138950665	chr8:61587259-61587260	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs57208432	chr8:61587262-61587263	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs146074683	chr8:61587263-61587264	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs200461851	chr8:61587264-61587265	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs142589834	chr8:61587273-61587274	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs79652220	chr8:61587332-61587333	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs10090193	chr8:61587351-61587352	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs182900234	chr8:61587435-61587436	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs550387357	chr8:61587436-61587437	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs570272204	chr8:61587511-61587512	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs544097225	chr8:61587574-61587575	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs370248420	chr8:61587612-61587613	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs562667521	chr8:61587646-61587647	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs373250967	chr8:61587662-61587663	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs532964854	chr8:61587697-61587698	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs551877252	chr8:61587754-61587755	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs186941157	chr8:61587790-61587791	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs566619958	chr8:61587849-61587850	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs113374307	chr8:61587853-61587854	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs556044122	chr8:61587854-61587855	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs190208461	chr8:61587894-61587895	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs554743752	chr8:61587899-61587900	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:103)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Colorectal cancer	21645411	CNVD
Melanoma	22183965	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
Schizophrenia	23813976	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:566 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:61585600-61586400	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr8:61586000-61586400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr8:61586400-61590400	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr8:61586400-61590400	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr8:61588200-61588600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
6	chr8:61588200-61589200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
7	chr8:61588400-61588600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
8	chr8:61588400-61588600	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
9	chr8:61588400-61588600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
10	chr8:61588400-61588800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
11	chr8:61588400-61589400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
12	chr8:61588400-61589400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr8:61588400-61590400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
14	chr8:61588600-61588800	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
15	chr8:61588600-61588800	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
16	chr8:61588600-61588800	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
17	chr8:61588600-61588800	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr8:61588600-61589000	Enhancers	H9 Cell Line	embryonic stem cell
19	chr8:61588600-61589000	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
20	chr8:61588800-61589200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
21	chr8:61588800-61589200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
22	chr8:61588800-61590400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
23	chr8:61589000-61589200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
24	chr8:61589000-61589200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr8:61589200-61589400	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
26	chr8:61589200-61589400	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
27	chr8:61589200-61589400	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
28	chr8:61589200-61589400	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
29	chr8:61589200-61589400	Enhancers	HMEC	breast
30	chr8:61589200-61590000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr8:61589200-61590200	Enhancers	NHEK	skin
32	chr8:61589400-61589600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr8:61589400-61590200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
34	chr8:61589400-61590200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
35	chr8:61589400-61590400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
36	chr8:61589400-61590600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr8:61589600-61590000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr8:61589600-61590400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr8:61589600-61590600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
40	chr8:61590000-61590200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr8:61590000-61590200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
42	chr8:61590000-61590200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr8:61590000-61590400	Enhancers	Breast Myoepithelial Primary Cells	Breast
44	chr8:61590000-61590400	Enhancers	Adipose Nuclei	Adipose
45	chr8:61590000-61590400	Enhancers	A549	lung
46	chr8:61590000-61590800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr8:61590000-61593600	Active TSS	Rectal Mucosa Donor 29	rectum
48	chr8:61590000-61593800	Active TSS	Rectal Mucosa Donor 31	rectum
49	chr8:61590000-61593800	Active TSS	HMEC	breast
50	chr8:61590200-61590400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links