Variant report

Variant	nsv824837
Chromosome Location	chr9:6011419-6014118
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:14)
CpG islands
(count:61)
Chromatin interactive
region (count:4)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:14 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr9:6013314-6013405	Spleen_OC	spleen:	n/a	n/a
2	JUND	chr9:6012748-6013057	HepG2	liver:	n/a	n/a
3	POLR2A	chr9:6011445-6011881	MCF10A-Er-Src	breast:	n/a	n/a
4	POLR2A	chr9:6012268-6012427	H1-hESC	embryonic stem cell:	n/a	n/a
5	POLR2A	chr9:6012524-6012959	MCF10A-Er-Src	breast:	n/a	n/a
6	POLR2A	chr9:6011737-6011937	MCF10A-Er-Src	breast:	n/a	n/a
7	POLR2A	chr9:6011071-6011485	MCF10A-Er-Src	breast:	n/a	n/a
8	POLR2A	chr9:6013296-6013320	HepG2	liver:	n/a	n/a
9	POLR2A	chr9:6012182-6013883	H1-hESC	embryonic stem cell:	n/a	n/a
10	POLR2A	chr9:6013078-6013189	H1-hESC	embryonic stem cell:	n/a	n/a
11	POLR2A	chr9:6012738-6012873	H1-hESC	embryonic stem cell:	n/a	n/a
12	POLR2A	chr9:6013343-6013495	MCF10A-Er-Src	breast:	n/a	n/a
13	POLR2A	chr9:6011771-6012372	K562	blood:	n/a	n/a
14	STAT3	chr9:6011822-6012006	MCF10A-Er-Src	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:6013624-6013674	NHDF-neo	bronchial:	n/a
2	chr9:6013624-6013674	HEEpiC	esophagus:	n/a
3	chr9:6013624-6013674	HEK293	kidney:	embryo
4	chr9:6013624-6013674	HRCEpiC	kidney:	n/a
5	chr9:6013624-6013674	U87	brain:	n/a
6	chr9:6013624-6013674	PFSK-1	brain:	n/a
7	chr9:6013624-6013674	SK-N-SH	brain:	n/a
8	chr9:6013624-6013674	AoSMC	blood vessel:	n/a
9	chr9:6013624-6013674	PrEC	prostate:	n/a
10	chr9:6013624-6013674	HL-60	blood:	n/a
11	chr9:6013624-6013674	GM12891	blood:	n/a
12	chr9:6013624-6013674	AG04449	skin:	fetal
13	chr9:6013624-6013674	MCF-7	breast:	n/a
14	chr9:6013624-6013674	RPTEC	kidney:	n/a
15	chr9:6013624-6013674	AG10803	skin:	n/a
16	chr9:6013624-6013674	AG09309	skin:	n/a
17	chr9:6013624-6013674	Caco-2	colon:	n/a
18	chr9:6013624-6013674	A549	lung:	n/a
19	chr9:6013624-6013674	PANC-1	pancreas:	n/a
20	chr9:6013624-6013674	NT2-D1	testis:	n/a
21	chr9:6013624-6013674	HRE	kidney:	n/a
22	chr9:6013624-6013674	BJ	skin:	n/a
23	chr9:6013624-6013674	NB4	blood:	n/a
24	chr9:6013624-6013674	GM06990	blood:	n/a
25	chr9:6013624-6013674	HCF	heart:	n/a
26	chr9:6013624-6013674	HepG2	liver:	n/a
27	chr9:6013624-6013674	HRPEpiC	eye:	n/a
28	chr9:6013624-6013674	H1-hESC	embryonic stem cell:	embryo
29	chr9:6013624-6013674	HCM	heart:	n/a
30	chr9:6013624-6013674	HUVEC	blood vessel:	n/a
31	chr9:6013624-6013674	Hepatocyte	liver:	n/a
32	chr9:6013624-6013674	HMEC	breast:	n/a
33	chr9:6013624-6013674	HCPEpiC	choroid plexus:	n/a
34	chr9:6013624-6013674	NH-A	brain:	n/a
35	chr9:6013624-6013674	NHBE	bronchial:	n/a
36	chr9:6013624-6013674	HCT-116	colon:	n/a
37	chr9:6013624-6013674	K562	blood:	n/a
38	chr9:6013624-6013674	SK-N-MC	brain:	n/a
39	chr9:6013624-6013674	SKMC	muscle:	n/a
40	chr9:6013624-6013674	GM19239	blood:	n/a
41	chr9:6013624-6013674	ProgFib	skin:	n/a
42	chr9:6013624-6013674	Hela-S3	cervix:	n/a
43	chr9:6013624-6013674	LNCaP	prostate:	n/a
44	chr9:6013624-6013674	HAEpiC	amniotic membrane:	n/a
45	chr9:6013624-6013674	HIPEpiC	eye:	n/a
46	chr9:6013624-6013674	HNPCEpiC	eye:	n/a
47	chr9:6013624-6013674	Jurkat	blood:	n/a
48	chr9:6013624-6013674	IMR90	lung:	fetal
49	chr9:6013624-6013674	MCF10A-Er-Src	breast:	n/a
50	chr9:6013624-6013674	GM12878	blood:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:5834379..5837250-chr9:6013398..6014950,2	MCF-7	breast:
2	chr9:6006778..6010531-chr9:6011866..6018012,11	MCF-7	breast:
3	chr9:5982537..5984417-chr9:6009153..6011751,2	K562	blood:
4	chr9:5975596..5977184-chr9:6010067..6012424,2	K562	blood:

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	RANBP6	hsa-miR-374b-5p	chr9:6012254-6012276
2	RANBP6	hsa-miR-374b-5p	chr9:6012213-6012234

Variant related genes	Relation type
KIAA2026	TF binding region
KIAA2026	CpG island
ENSG00000263575	chromatin interactions
ENSG00000183354	chromatin interactions

Extended variants
information (count: 120 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:120 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs577176462	chr9:6011422-6011423	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs545365695	chr9:6011429-6011430	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs185619071	chr9:6011489-6011490	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs543570913	chr9:6011622-6011623	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs562461096	chr9:6011645-6011646	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs189479785	chr9:6011666-6011667	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs547956379	chr9:6011716-6011717	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs560130695	chr9:6011745-6011746	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs144821810	chr9:6011753-6011754	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs10758736	chr9:6011757-6011758	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs117624849	chr9:6011837-6011838	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs374356592	chr9:6011843-6011844	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs540557805	chr9:6011848-6011849	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs538051521	chr9:6011946-6011947	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs531868706	chr9:6011975-6011976	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs549971653	chr9:6011995-6011996	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs568137790	chr9:6012018-6012019	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs535977806	chr9:6012056-6012057	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs542145138	chr9:6012060-6012061	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs76877269	chr9:6012114-6012115	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs572449109	chr9:6012120-6012121	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs181376476	chr9:6012122-6012123	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs112381878	chr9:6012123-6012124	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs185909435	chr9:6012135-6012136	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs527921772	chr9:6012145-6012146	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs543631700	chr9:6012165-6012166	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs547980683	chr9:6012179-6012180	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs189972965	chr9:6012210-6012211	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs1131	chr9:6012226-6012227	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	4 gene(s)	Overlapped CNVs	n/a
30	rs574138715	chr9:6012231-6012232	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region miRNA target site	4 gene(s)	Overlapped CNVs	n/a
31	rs3739650	chr9:6012238-6012239	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs201281364	chr9:6012242-6012243	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs1130	chr9:6012344-6012345	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs62557309	chr9:6012378-6012379	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs143367425	chr9:6012387-6012388	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs146740984	chr9:6012403-6012404	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs371185956	chr9:6012426-6012427	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs376886559	chr9:6012431-6012432	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs200580196	chr9:6012441-6012442	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs200936381	chr9:6012452-6012453	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs199594603	chr9:6012453-6012454	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs527289388	chr9:6012493-6012494	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs186485944	chr9:6012519-6012520	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs370403012	chr9:6012569-6012570	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs564392776	chr9:6012574-6012575	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs531662966	chr9:6012582-6012583	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs151310811	chr9:6012593-6012594	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs368154344	chr9:6012595-6012596	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs546060621	chr9:6012617-6012618	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs140356030	chr9:6012713-6012714	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:6008000-6014800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr9:6008400-6013400	Weak transcription	Gastric	stomach
3	chr9:6008400-6014200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr9:6008600-6013800	Weak transcription	Small Intestine	intestine
5	chr9:6008600-6014400	Weak transcription	Esophagus	oesophagus
6	chr9:6008600-6015200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr9:6008800-6012400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:6008800-6012600	Weak transcription	Left Ventricle	heart
9	chr9:6008800-6013400	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr9:6008800-6014200	Weak transcription	Lung	lung
11	chr9:6008800-6014400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr9:6008800-6014400	Weak transcription	Colonic Mucosa	Colon
13	chr9:6008800-6014400	Weak transcription	Spleen	Spleen
14	chr9:6008800-6014600	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr9:6009000-6011600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr9:6009000-6012400	Weak transcription	Placenta	Placenta
17	chr9:6009000-6012400	Weak transcription	Right Ventricle	heart
18	chr9:6009000-6012600	Weak transcription	Fetal Muscle Leg	muscle
19	chr9:6009000-6012800	Weak transcription	Fetal Muscle Trunk	muscle
20	chr9:6009000-6013600	Weak transcription	Aorta	Aorta
21	chr9:6009000-6013800	Weak transcription	Fetal Stomach	stomach
22	chr9:6009000-6014000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr9:6009000-6014200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr9:6009000-6014400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr9:6009000-6014400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr9:6009000-6014400	Weak transcription	Ovary	ovary
27	chr9:6009000-6014600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr9:6009200-6011600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr9:6009200-6011600	Weak transcription	Brain Angular Gyrus	brain
30	chr9:6009200-6011600	Weak transcription	Fetal Brain Female	brain
31	chr9:6009200-6011800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr9:6009200-6011800	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr9:6009200-6011800	Weak transcription	Adipose Nuclei	Adipose
34	chr9:6009200-6011800	Weak transcription	Brain Germinal Matrix	brain
35	chr9:6009200-6012000	Weak transcription	Primary B cells from peripheral blood	blood
36	chr9:6009200-6012000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr9:6009200-6012200	Weak transcription	HUES48 Cell Line	embryonic stem cell
38	chr9:6009200-6012400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr9:6009200-6012400	Weak transcription	Primary monocytes fromperipheralblood	blood
40	chr9:6009200-6012400	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr9:6009200-6012400	Weak transcription	Fetal Kidney	kidney
42	chr9:6009200-6012600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
43	chr9:6009200-6012600	Weak transcription	H1 Cell Line	embryonic stem cell
44	chr9:6009200-6012800	Weak transcription	Psoas Muscle	Psoas
45	chr9:6009200-6012800	Weak transcription	Skeletal Muscle Male	skeletal muscle
46	chr9:6009200-6012800	Weak transcription	NH-A	brain
47	chr9:6009200-6013200	Weak transcription	Brain Cingulate Gyrus	brain
48	chr9:6009200-6013200	Weak transcription	Rectal Smooth Muscle	rectum
49	chr9:6009200-6013200	Weak transcription	Thymus	Thymus
50	chr9:6009200-6013400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links