Variant report

Variant	nsv825346
Chromosome Location	chr10:37393740-37399521
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 219 )
Associated
traits (count: 41 )

Variant overlapped rSNPs/rCNVs (count:219 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs190006583	chr10:37393763-37393764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs1767360	chr10:37393774-37393775	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs539424840	chr10:37393830-37393831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs1200926	chr10:37393844-37393845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs562963645	chr10:37393853-37393854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs561922892	chr10:37393879-37393880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs530728076	chr10:37393893-37393894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs116864533	chr10:37393944-37393945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs1200927	chr10:37393962-37393963	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs555231694	chr10:37393994-37393995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs182282791	chr10:37394056-37394057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs532871938	chr10:37394129-37394130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs544073932	chr10:37394223-37394224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs371637073	chr10:37394258-37394259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs141606836	chr10:37394259-37394260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs75168308	chr10:37394296-37394297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs150406672	chr10:37394403-37394404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs559748131	chr10:37394414-37394415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs528534001	chr10:37394431-37394432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs187902636	chr10:37394456-37394457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs562235216	chr10:37394491-37394492	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542221350	chr10:37394515-37394516	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs531142448	chr10:37394518-37394519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs551230280	chr10:37394534-37394535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs564746505	chr10:37394539-37394540	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs533727446	chr10:37394569-37394570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs375081751	chr10:37394571-37394572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs546268701	chr10:37394587-37394588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs566473067	chr10:37394610-37394611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs145165777	chr10:37394617-37394618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs11011037	chr10:37394700-37394701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs76508820	chr10:37394714-37394715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs548691890	chr10:37394726-37394727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs568677548	chr10:37394742-37394743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs537635986	chr10:37394759-37394760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs557561242	chr10:37394771-37394772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs577515408	chr10:37394798-37394799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs566128675	chr10:37394843-37394844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs193221029	chr10:37394861-37394862	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs113441877	chr10:37394865-37394866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs549279223	chr10:37394881-37394882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs553042219	chr10:37394909-37394910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs573209355	chr10:37394966-37394967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs560482851	chr10:37395003-37395004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs569163492	chr10:37395070-37395071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs562146394	chr10:37395082-37395083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575835940	chr10:37395092-37395093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs544815702	chr10:37395094-37395095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs538456134	chr10:37395164-37395165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs183530586	chr10:37395233-37395234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:41)

Disease	PMID	Source
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Bethlem myopathy	20302629	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hepatocellular carcinoma	16785998	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37391400-37396400	Weak transcription	A549	lung
2	chr10:37396400-37398200	Enhancers	A549	lung
3	chr10:37398200-37399000	Weak transcription	A549	lung
4	chr10:37399000-37400000	ZNF genes & repeats	A549	lung

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