Variant report

Variant	nsv825354
Chromosome Location	chr10:43883418-43949936
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5253)
CpG islands
(count:3846)
Chromatin interactive
region (count:157)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:5253 , 50 per page) page: 1 2 3 4 5 6 7 ... 106

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:43891438-43891819	K562	blood:	n/a	n/a
2	ARID3A	chr10:43903133-43903496	HepG2	liver:	n/a	n/a
3	ARID3A	chr10:43913251-43913880	K562	blood:	n/a	n/a
4	ARID3A	chr10:43892495-43893285	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:43889612-43889701	K562	blood:	n/a	n/a
6	ARID3A	chr10:43904435-43904677	HepG2	liver:	n/a	n/a
7	ARID3A	chr10:43915874-43917818	HepG2	liver:	n/a	n/a
8	ARID3A	chr10:43926756-43926757	K562	blood:	n/a	n/a
9	ARID3A	chr10:43897673-43898229	K562	blood:	n/a	n/a
10	ARID3A	chr10:43894342-43894603	K562	blood:	n/a	n/a
11	ARID3A	chr10:43912679-43912870	K562	blood:	n/a	n/a
12	ARID3A	chr10:43892798-43893411	K562	blood:	n/a	n/a
13	ARID3A	chr10:43926083-43926102	K562	blood:	n/a	n/a
14	ARID3A	chr10:43913484-43913859	HepG2	liver:	n/a	n/a
15	ARID3A	chr10:43932036-43932352	K562	blood:	n/a	n/a
16	ARID3A	chr10:43911031-43911319	K562	blood:	n/a	n/a
17	ARID3A	chr10:43894477-43895368	HepG2	liver:	n/a	n/a
18	ARID3A	chr10:43899412-43899659	HepG2	liver:	n/a	n/a
19	ARID3A	chr10:43918875-43919135	K562	blood:	n/a	n/a
20	ARID3A	chr10:43892044-43892296	K562	blood:	n/a	chr10:43892110-43892118
21	ARID3A	chr10:43891217-43892212	HepG2	liver:	n/a	chr10:43892110-43892118
22	ARID3A	chr10:43901088-43902392	K562	blood:	n/a	n/a
23	ARID3A	chr10:43904115-43905090	K562	blood:	n/a	n/a
24	ARID3A	chr10:43902758-43902901	K562	blood:	n/a	n/a
25	ARID3A	chr10:43931785-43932602	HepG2	liver:	n/a	n/a
26	ATF1	chr10:43911001-43911348	K562	blood:	n/a	n/a
27	ATF1	chr10:43931757-43932586	K562	blood:	n/a	n/a
28	ATF1	chr10:43904181-43905066	K562	blood:	n/a	n/a
29	ATF1	chr10:43913400-43913967	K562	blood:	n/a	n/a
30	ATF2	chr10:43948851-43949227	GM12878	blood:	n/a	n/a
31	ATF2	chr10:43947310-43947971	GM12878	blood:	n/a	n/a
32	ATF2	chr10:43891867-43892324	GM12878	blood:	n/a	n/a
33	ATF2	chr10:43892624-43892978	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr10:43902980-43903533	GM12878	blood:	n/a	n/a
35	ATF2	chr10:43902934-43903817	GM12878	blood:	n/a	n/a
36	ATF2	chr10:43913553-43913858	GM12878	blood:	n/a	n/a
37	ATF2	chr10:43904394-43904703	GM12878	blood:	n/a	n/a
38	ATF2	chr10:43948773-43949301	GM12878	blood:	n/a	n/a
39	ATF2	chr10:43904228-43904761	GM12878	blood:	n/a	n/a
40	ATF2	chr10:43892485-43893095	GM12878	blood:	n/a	n/a
41	ATF2	chr10:43913368-43913965	GM12878	blood:	n/a	n/a
42	ATF2	chr10:43903042-43903316	H1-hESC	embryonic stem cell:	n/a	n/a
43	ATF3	chr10:43892493-43892834	HepG2	liver:	n/a	n/a
44	ATF3	chr10:43892603-43893090	A549	lung:	n/a	n/a
45	ATF3	chr10:43892571-43892839	GM12878	blood:	n/a	n/a
46	ATF3	chr10:43892491-43892912	GM12878	blood:	n/a	n/a
47	ATF3	chr10:43903078-43903395	A549	lung:	n/a	n/a
48	ATF3	chr10:43903179-43903593	K562	blood:	n/a	n/a
49	ATF3	chr10:43904245-43904793	K562	blood:	n/a	chr10:43904670-43904679
50	ATF3	chr10:43892451-43892948	K562	blood:	n/a	n/a

(count:3846 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:43904406-43904456	HRCEpiC	kidney:	n/a
2	chr10:43929290-43929340	HEEpiC	esophagus:	n/a
3	chr10:43904768-43904818	HCM	heart:	n/a
4	chr10:43904406-43904456	HRCEpiC	kidney:	n/a
5	chr10:43929290-43929340	HEEpiC	esophagus:	n/a
6	chr10:43904768-43904818	HCM	heart:	n/a
7	chr10:43904326-43904376	H1-hESC	embryonic stem cell:	embryo
8	chr10:43932900-43932950	GM12878	blood:	n/a
9	chr10:43915835-43915885	HNPCEpiC	eye:	n/a
10	chr10:43947405-43947455	CMK	blood:	n/a
11	chr10:43904038-43904088	HPAEpiC	pulmonary alveolar:	n/a
12	chr10:43894095-43894145	GM19239	blood:	n/a
13	chr10:43932466-43932516	HNPCEpiC	eye:	n/a
14	chr10:43903343-43903393	U87	brain:	n/a
15	chr10:43904940-43904990	HRE	kidney:	n/a
16	chr10:43893015-43893065	HAEpiC	amniotic membrane:	n/a
17	chr10:43941753-43941803	U87	brain:	n/a
18	chr10:43932900-43932950	HRE	kidney:	n/a
19	chr10:43932466-43932516	AG09319	gingival:	n/a
20	chr10:43903196-43903246	Hepatocyte	liver:	n/a
21	chr10:43904861-43904911	HRPEpiC	eye:	n/a
22	chr10:43898033-43898083	HPAEpiC	pulmonary alveolar:	n/a
23	chr10:43898033-43898083	BJ	skin:	n/a
24	chr10:43931089-43931139	SK-N-SH_RA	brain:	n/a
25	chr10:43905074-43905124	Caco-2	colon:	n/a
26	chr10:43932620-43932670	Hela-S3	cervix:	n/a
27	chr10:43903588-43903638	HIPEpiC	eye:	n/a
28	chr10:43891547-43891597	Hela-S3	cervix:	n/a
29	chr10:43903270-43903320	ovcar-3	ovarian:	n/a
30	chr10:43895225-43895275	HAEpiC	amniotic membrane:	n/a
31	chr10:43905074-43905124	SK-N-MC	brain:	n/a
32	chr10:43903343-43903393	IMR90	lung:	fetal
33	chr10:43903588-43903638	GM12878	blood:	n/a
34	chr10:43903472-43903522	HRPEpiC	eye:	n/a
35	chr10:43904768-43904818	T-47D	breast:	n/a
36	chr10:43932466-43932516	RPTEC	kidney:	n/a
37	chr10:43903345-43903395	NH-A	brain:	n/a
38	chr10:43892908-43892958	PANC-1	pancreas:	n/a
39	chr10:43892790-43892840	HEK293	kidney:	embryo
40	chr10:43891547-43891597	AG04450	lung:	fetal
41	chr10:43908679-43908729	HEEpiC	esophagus:	n/a
42	chr10:43893015-43893065	GM12892	blood:	n/a
43	chr10:43903345-43903395	HCF	heart:	n/a
44	chr10:43905074-43905124	GM12892	blood:	n/a
45	chr10:43916495-43916545	Caco-2	colon:	n/a
46	chr10:43903410-43903460	A549	lung:	n/a
47	chr10:43947405-43947455	AG04450	lung:	fetal
48	chr10:43941753-43941803	GM12891	blood:	n/a
49	chr10:43904038-43904088	HCM	heart:	n/a
50	chr10:43904326-43904376	IMR90	lung:	fetal

(count:157 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr10:43913716..43915348-chr10:43917079..43919877,2	K562	blood:
2	chr10:43903376..43903911-chr17:62501886..62502819,2	Hela-S3	cervix:
3	chr10:43912793..43917262-chr10:43929806..43934635,10	MCF-7	breast:
4	chr10:43901586..43902527-chr17:33905336..33905850,2	Hela-S3	cervix:
5	chr10:43914769..43917445-chr10:43920064..43922045,2	MCF-7	breast:
6	chr10:43919040..43921550-chr10:43937785..43940641,2	K562	blood:
7	chr10:43872575..43876095-chr10:43882284..43884232,3	MCF-7	breast:
8	chr10:43903962..43904641-chr5:43483530..43484417,2	Hela-S3	cervix:
9	chr1:180991640..180992175-chr10:43902810..43903662,2	Hela-S3	cervix:
10	chr10:43845449..43848194-chr10:43889287..43891526,2	K562	blood:
11	chr10:43902184..43903883-chr10:43937396..43939761,2	MCF-7	breast:
12	chr10:43907404..43911087-chr10:43912336..43916767,5	MCF-7	breast:
13	chr10:43902951..43903891-chr11:62439137..62439806,2	NB4	blood:
14	chr1:153507944..153508640-chr10:43903183..43903757,2	Hela-S3	cervix:
15	chr10:43626713..43628248-chr10:43884953..43886619,2	K562	blood:
16	chr10:43931979..43932697-chr12:46765935..46766466,2	Hela-S3	cervix:
17	chr10:43904720..43905397-chr10:43951179..43951725,2	MCF-7	breast:
18	chr10:43627846..43629812-chr10:43949742..43951842,2	MCF-7	breast:
19	chr10:43843916..43845531-chr10:43886417..43888525,2	MCF-7	breast:
20	chr10:43930579..43934633-chr10:43949587..43954210,8	K562	blood:
21	chr10:43901751..43904156-chr7:26239345..26241405,2	K562	blood:
22	chr10:43901770..43904893-chr10:44100789..44103373,5	MCF-7	breast:
23	chr10:43873117..43874743-chr10:43887091..43889680,2	MCF-7	breast:
24	chr10:43919040..43921550-chr10:43937785..43940641,2	K562	blood:
25	chr10:43899308..43901344-chr10:43930601..43933221,2	MCF-7	breast:
26	chr10:43903270..43903785-chr19:36139022..36139531,2	HCT-116	colon:
27	chr10:43913716..43915348-chr10:43917079..43919877,2	K562	blood:
28	chr10:43919994..43922298-chr10:43925539..43927816,2	K562	blood:
29	chr10:43941606..43943262-chr10:43948647..43951071,2	K562	blood:
30	chr10:43902853..43903529-chr11:65625479..65626467,2	Hela-S3	cervix:
31	chr10:43902752..43903555-chr5:177631240..177631950,2	Hela-S3	cervix:
32	chr10:43943911..43945434-chr10:43948722..43951171,2	K562	blood:
33	chr10:43904675..43905601-chr2:85133815..85134604,2	Hela-S3	cervix:
34	chr10:43931438..43934391-chr10:43934801..43937719,2	K562	blood:
35	chr10:43697420..43700683-chr10:43890424..43894292,4	K562	blood:
36	chr10:43761779..43764546-chr10:43932522..43934779,2	K562	blood:
37	chr10:43911150..43912712-chr10:43915997..43917552,2	MCF-7	breast:
38	chr10:43904622..43905510-chr18:30050330..30050885,2	Hela-S3	cervix:
39	chr10:43890830..43894030-chr10:43926925..43929713,4	MCF-7	breast:
40	chr10:43904246..43904770-chr9:33166951..33167676,2	NB4	blood:
41	chr10:43931567..43932335-chr8:33342087..33342660,2	Hela-S3	cervix:
42	chr10:43936170..43937727-chr10:43949180..43951482,2	K562	blood:
43	chr10:43943009..43945472-chr10:43950940..43952726,2	MCF-7	breast:
44	chr10:43903142..43903814-chr16:67207852..67208622,2	Hela-S3	cervix:
45	chr10:43904301..43905147-chr12:54674227..54674856,2	Hela-S3	cervix:
46	chr10:43930912..43933891-chr10:43949765..43952473,2	MCF-7	breast:
47	chr10:43873108..43875014-chr10:43949897..43951449,2	MCF-7	breast:
48	chr10:43903162..43904071-chr16:68002331..68002833,2	Hela-S3	cervix:
49	chr10:43902555..43903292-chr19:28284331..28284849,2	Hela-S3	cervix:
50	chr10:43931623..43934355-chr10:43938465..43940752,2	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FXYD4-4	chr10:43947368-43950112	NONHSAT012969
2	lnc-ZNF487P-1	chr10:43916400-43916514	XLOC_008467
3	lnc-ZNF487P-1	chr10:43917118-43917254	XLOC_008467
4	lnc-ZNF487P-2	chr10:43927778-43928173	NONHSAT012966
5	lnc-ZNF487P-4	chr10:43906922-43908086	NONHSAT012960
6	lnc-FXYD4-4	chr10:43949513-43949980	NONHSAT012968
7	lnc-ZNF487P-1	chr10:43917118-43917548	ENSG00000230555.2
8	lnc-ZNF487P-1	chr10:43916186-43916514	ENSG00000230555.2
9	lnc-FXYD4-4	chr10:43932574-43932710	NR_026693
10	lnc-FXYD4-4	chr10:43932596-43932710	NONHSAT012968
11	lnc-ZNF487P-1	chr10:43916047-43916097	XLOC_008467
12	lnc-ZNF487P-3	chr10:43926290-43927317	NONHSAT012965

No data

Variant related genes	Relation type
ENSG00000230555	TF binding region
HNRNPF	TF binding region
ZNF487	TF binding region
RNU7-193P	TF binding region
ENSG00000221400	TF binding region
ENSG00000230555	CpG island
HNRNPF	CpG island
ZNF487	CpG island
RNU7-193P	CpG island
ENSG00000221400	CpG island
ENSG00000124193	chromatin interactions
ENSG00000126267	chromatin interactions
ENSG00000270117	chromatin interactions
ENSG00000221400	chromatin interactions
ENSG00000258890	chromatin interactions
ENSG00000198298	chromatin interactions
ENSG00000243660	chromatin interactions
ENSG00000198915	chromatin interactions
ENSG00000117450	chromatin interactions
ENSG00000165119	chromatin interactions
ENSG00000230555	chromatin interactions
ENSG00000150201	chromatin interactions
ENSG00000162194	chromatin interactions
ENSG00000169826	chromatin interactions
ENSG00000197956	chromatin interactions
ENSG00000232004	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000169813	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000184148	chromatin interactions
ENSG00000267033	chromatin interactions
ENSG00000130520	chromatin interactions
ENSG00000227477	chromatin interactions
ENSG00000108654	chromatin interactions
ENSG00000110958	chromatin interactions
ENSG00000221886	chromatin interactions
ENSG00000108733	chromatin interactions
ENSG00000123975	chromatin interactions
ENSG00000124067	chromatin interactions
ENSG00000186854	chromatin interactions
ENSG00000103415	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000197451	chromatin interactions
ENSG00000151881	chromatin interactions
ENSG00000153406	chromatin interactions
ENSG00000135823	chromatin interactions
ENSG00000101109	chromatin interactions
ENSG00000207005	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000197694	chromatin interactions
ENSG00000261469	chromatin interactions
ENSG00000228395	chromatin interactions
ENSG00000261824	chromatin interactions
ENSG00000141441	chromatin interactions
ENSG00000272635	chromatin interactions
ENSG00000122565	chromatin interactions
ENSG00000252532	chromatin interactions
ENSG00000156162	chromatin interactions
ENSG00000095906	chromatin interactions
ENSG00000140939	chromatin interactions
ENSG00000135486	chromatin interactions
ENSG00000251562	chromatin interactions
ENSG00000233554	chromatin interactions
ENSG00000198042	chromatin interactions
ENSG00000267575	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000166741	chromatin interactions
ENSG00000273008	chromatin interactions
ENSG00000249492	chromatin interactions
ENSG00000162032	chromatin interactions
ENSG00000163468	chromatin interactions
ENSG00000163467	chromatin interactions
ENSG00000122566	chromatin interactions
ENSG00000110697	chromatin interactions
ENSG00000272173	chromatin interactions
ENSG00000086062	chromatin interactions

Extended variants
information (count: 2887 )
Associated
traits (count: 54 )

Variant overlapped rSNPs/rCNVs (count:2887 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs373389756	chr10:43883418-43883419	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs557658890	chr10:43883425-43883426	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs376593709	chr10:43883462-43883463	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs143393044	chr10:43883466-43883467	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs368984950	chr10:43883474-43883475	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs187126410	chr10:43883486-43883487	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs116110063	chr10:43883514-43883515	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs562090081	chr10:43883526-43883527	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs565343245	chr10:43883530-43883531	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs373982101	chr10:43883534-43883535	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs529406942	chr10:43883571-43883572	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs547690651	chr10:43883601-43883602	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs560165706	chr10:43883619-43883620	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs10793430	chr10:43883645-43883646	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs552287154	chr10:43883687-43883688	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs191941483	chr10:43883692-43883693	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs148205008	chr10:43883725-43883726	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs577799733	chr10:43883731-43883732	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs184187276	chr10:43883739-43883740	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs142704898	chr10:43883740-43883741	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs11238532	chr10:43883742-43883743	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs75513862	chr10:43883758-43883759	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs577030925	chr10:43883766-43883767	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs572231337	chr10:43883788-43883789	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs188499141	chr10:43883801-43883802	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs147340808	chr10:43883817-43883818	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs558271888	chr10:43883825-43883826	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs576024096	chr10:43883827-43883828	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs543413700	chr10:43883833-43883834	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs562012406	chr10:43883834-43883835	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs545789567	chr10:43883841-43883842	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs574017823	chr10:43883852-43883853	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs541739131	chr10:43883861-43883862	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs17153601	chr10:43883895-43883896	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs533617981	chr10:43883935-43883936	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs370081904	chr10:43883943-43883944	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs17153606	chr10:43883946-43883947	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs12571047	chr10:43883957-43883958	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs531293799	chr10:43884025-43884026	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs549816493	chr10:43884079-43884080	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs192932804	chr10:43884085-43884086	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs185569378	chr10:43884093-43884094	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs368277809	chr10:43884139-43884140	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs547702282	chr10:43884140-43884141	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs565727217	chr10:43884168-43884169	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs190492291	chr10:43884189-43884190	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs561878283	chr10:43884228-43884229	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs559410186	chr10:43884234-43884235	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs372872198	chr10:43884235-43884236	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs180777481	chr10:43884246-43884247	Strong transcription Weak transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:54)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Mental retardation	21062444	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22241247	CNVD
Intellectual disability	21811512	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:3526 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:43858600-43891000	Weak transcription	Right Atrium	heart
2	chr10:43873200-43890200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr10:43873400-43891000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr10:43879200-43889800	Strong transcription	Brain Germinal Matrix	brain
5	chr10:43879400-43889400	Strong transcription	Fetal Brain Female	brain
6	chr10:43879600-43885800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
7	chr10:43879600-43889400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr10:43879800-43889400	Strong transcription	Rectal Mucosa Donor 29	rectum
9	chr10:43879800-43890600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr10:43880000-43885400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr10:43880000-43885400	Strong transcription	Skeletal Muscle Male	skeletal muscle
12	chr10:43880000-43886200	Strong transcription	Adipose Nuclei	Adipose
13	chr10:43880000-43888200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr10:43880000-43889400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr10:43880000-43889600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr10:43880000-43889600	Strong transcription	Thymus	Thymus
17	chr10:43880000-43890200	Strong transcription	Fetal Muscle Leg	muscle
18	chr10:43880000-43890200	Strong transcription	HSMMtube	muscle
19	chr10:43880000-43890400	Strong transcription	Fetal Muscle Trunk	muscle
20	chr10:43880000-43890800	Strong transcription	Muscle Satellite Cultured Cells	--
21	chr10:43880200-43885000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
22	chr10:43880200-43885400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr10:43880200-43885400	Strong transcription	Dnd41	blood
24	chr10:43880200-43885400	Strong transcription	HMEC	breast
25	chr10:43880200-43885800	Strong transcription	Placenta	Placenta
26	chr10:43880200-43888200	Strong transcription	Primary neutrophils fromperipheralblood	blood
27	chr10:43880200-43889000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
28	chr10:43880200-43890000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr10:43880200-43890200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr10:43880200-43890200	Strong transcription	Osteobl	bone
31	chr10:43880200-43890800	Strong transcription	HSMM	muscle
32	chr10:43880400-43884200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr10:43880400-43885800	Strong transcription	Brain Anterior Caudate	brain
34	chr10:43880400-43889000	Strong transcription	Primary monocytes fromperipheralblood	blood
35	chr10:43880400-43889000	Strong transcription	Monocytes-CD14+_RO01746	blood
36	chr10:43880400-43889600	Strong transcription	Sigmoid Colon	Sigmoid Colon
37	chr10:43880400-43890200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr10:43880400-43890400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr10:43880400-43890400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr10:43880400-43890800	Strong transcription	Hela-S3	cervix
41	chr10:43880600-43885000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr10:43880600-43885200	Strong transcription	A549	lung
43	chr10:43880600-43885400	Strong transcription	Duodenum Smooth Muscle	Duodenum
44	chr10:43880600-43889600	Strong transcription	Esophagus	oesophagus
45	chr10:43880600-43890600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr10:43880600-43890600	Strong transcription	NH-A	brain
47	chr10:43880800-43885400	Strong transcription	Liver	Liver
48	chr10:43880800-43885600	Strong transcription	Fetal Intestine Large	intestine
49	chr10:43880800-43889400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr10:43880800-43889800	Strong transcription	HUES64 Cell Line	embryonic stem cell

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