Variant report

Variant	nsv825502
Chromosome Location	chr10:90518994-90528513
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr10:90522644-90523045	GM12878	blood:	n/a	n/a
2	ATF2	chr10:90522637-90523078	GM12878	blood:	n/a	n/a
3	BATF	chr10:90522620-90522976	GM12878	blood:	n/a	n/a
4	BATF	chr10:90522734-90522932	GM12878	blood:	n/a	n/a
5	BCL11A	chr10:90522617-90522933	GM12878	blood:	n/a	n/a
6	BCL3	chr10:90522702-90522971	GM12878	blood:	n/a	n/a
7	BHLHE40	chr10:90520657-90520672	GM12878	blood:	n/a	n/a
8	CEBPB	chr10:90519354-90519684	HepG2	liver:	n/a	chr10:90519631-90519644
9	CEBPB	chr10:90526284-90526472	HepG2	liver:	n/a	chr10:90526369-90526380
10	CEBPB	chr10:90526302-90526460	H1-hESC	embryonic stem cell:	n/a	chr10:90526369-90526380
11	CEBPB	chr10:90519610-90519695	Hela-S3	cervix:	n/a	chr10:90519631-90519644
12	CEBPB	chr10:90528461-90528542	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr10:90528244-90528728	A549	lung:	n/a	n/a
14	CEBPB	chr10:90528327-90528679	IMR90	lung:	n/a	n/a
15	CEBPB	chr10:90528340-90528646	A549	lung:	n/a	n/a
16	CEBPB	chr10:90528025-90528710	Hela-S3	cervix:	n/a	n/a
17	CUX1	chr10:90522695-90522954	GM12878	blood:	n/a	n/a
18	CUX1	chr10:90523891-90524244	GM12878	blood:	n/a	n/a
19	E2F4	chr10:90524427-90524434	MCF10A-Er-Src	breast:	n/a	n/a
20	EBF1	chr10:90522689-90522994	GM12878	blood:	n/a	n/a
21	EBF1	chr10:90527596-90527775	GM12878	blood:	n/a	chr10:90527657-90527668
22	EBF1	chr10:90523736-90524683	GM12878	blood:	n/a	n/a
23	EP300	chr10:90522854-90522890	GM12878	blood:	n/a	n/a
24	EP300	chr10:90524255-90524499	GM12878	blood:	n/a	n/a
25	EP300	chr10:90528050-90528977	Hela-S3	cervix:	n/a	n/a
26	FOS	chr10:90519613-90519704	MCF10A-Er-Src	breast:	n/a	n/a
27	FOXA2	chr10:90527218-90527526	A549	lung:	n/a	n/a
28	FOXM1	chr10:90522608-90523084	GM12878	blood:	n/a	n/a
29	GABPA	chr10:90519369-90520046	HL-60	blood:	n/a	n/a
30	GABPA	chr10:90519208-90520166	HL-60	blood:	n/a	n/a
31	GATA3	chr10:90521343-90521495	SH-SY5Y	brain:	n/a	n/a
32	GTF2F1	chr10:90528460-90528510	H1-hESC	embryonic stem cell:	n/a	n/a
33	IKZF1	chr10:90522653-90522930	GM12878	blood:	n/a	n/a
34	IRF3	chr10:90524552-90524591	GM12878	blood:	n/a	n/a
35	IRF4	chr10:90522577-90522942	GM12878	blood:	n/a	n/a
36	MAFF	chr10:90526986-90527017	HepG2	liver:	n/a	n/a
37	MAFK	chr10:90527007-90527116	IMR90	lung:	n/a	chr10:90527049-90527063 chr10:90527050-90527061 chr10:90527046-90527061 chr10:90527051-90527062 chr10:90527046-90527062 chr10:90527051-90527062
38	MAFK	chr10:90526918-90527142	HepG2	liver:	n/a	chr10:90527049-90527063 chr10:90527050-90527061 chr10:90527046-90527061 chr10:90527051-90527062 chr10:90527046-90527062 chr10:90527051-90527062
39	MAFK	chr10:90526981-90527185	HepG2	liver:	n/a	chr10:90527049-90527063 chr10:90527050-90527061 chr10:90527046-90527061 chr10:90527051-90527062 chr10:90527046-90527062 chr10:90527051-90527062
40	MAX	chr10:90519494-90519842	NB4	blood:	n/a	chr10:90519614-90519623
41	MYC	chr10:90519483-90519836	NB4	blood:	n/a	chr10:90519614-90519623
42	NFIC	chr10:90522427-90523180	GM12878	blood:	n/a	n/a
43	NFIC	chr10:90522650-90523030	GM12878	blood:	n/a	n/a
44	PAX5	chr10:90523986-90524275	GM12878	blood:	n/a	chr10:90524017-90524026
45	POLR2A	chr10:90519309-90520084	HL-60	blood:	n/a	n/a
46	POLR2A	chr10:90519456-90519864	HL-60	blood:	n/a	n/a
47	POLR2A	chr10:90520986-90521010	MCF10A-Er-Src	breast:	n/a	n/a
48	POLR2A	chr10:90521439-90521517	MCF10A-Er-Src	breast:	n/a	n/a
49	POLR2A	chr10:90527402-90527476	SK-N-SH	brain:	n/a	n/a
50	RCOR1	chr10:90524128-90524198	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:90519680-90519730	T-47D	breast:	n/a
2	chr10:90519680-90519730	Hela-S3	cervix:	n/a
3	chr10:90519680-90519730	HIPEpiC	eye:	n/a
4	chr10:90519680-90519730	AG10803	skin:	n/a
5	chr10:90519680-90519730	NHDF-neo	bronchial:	n/a
6	chr10:90519680-90519730	CMK	blood:	n/a
7	chr10:90519680-90519730	NT2-D1	testis:	n/a
8	chr10:90519680-90519730	HCM	heart:	n/a
9	chr10:90519680-90519730	HRPEpiC	eye:	n/a
10	chr10:90519680-90519730	HAEpiC	amniotic membrane:	n/a
11	chr10:90519680-90519730	AG04450	lung:	fetal
12	chr10:90519680-90519730	GM19239	blood:	n/a
13	chr10:90519680-90519730	HL-60	blood:	n/a
14	chr10:90519680-90519730	PANC-1	pancreas:	n/a
15	chr10:90519680-90519730	HNPCEpiC	eye:	n/a
16	chr10:90519680-90519730	HCF	heart:	n/a
17	chr10:90519680-90519730	IMR90	lung:	fetal
18	chr10:90519680-90519730	AG04449	skin:	fetal
19	chr10:90519680-90519730	H1-hESC	embryonic stem cell:	embryo
20	chr10:90519680-90519730	NB4	blood:	n/a
21	chr10:90519680-90519730	MCF10A-Er-Src	breast:	n/a
22	chr10:90519680-90519730	Hepatocyte	liver:	n/a
23	chr10:90519680-90519730	HCT-116	colon:	n/a
24	chr10:90519680-90519730	HepG2	liver:	n/a
25	chr10:90519680-90519730	GM12891	blood:	n/a
26	chr10:90519680-90519730	GM06990	blood:	n/a
27	chr10:90519680-90519730	HUVEC	blood vessel:	n/a
28	chr10:90519680-90519730	K562	blood:	n/a
29	chr10:90519680-90519730	SK-N-SH	brain:	n/a
30	chr10:90519680-90519730	HRE	kidney:	n/a
31	chr10:90519680-90519730	Caco-2	colon:	n/a
32	chr10:90519680-90519730	NHBE	bronchial:	n/a
33	chr10:90519680-90519730	BJ	skin:	n/a
34	chr10:90519680-90519730	HRCEpiC	kidney:	n/a
35	chr10:90519680-90519730	BE2_C	brain:	n/a
36	chr10:90519680-90519730	SK-N-SH_RA	brain:	n/a
37	chr10:90519680-90519730	AG09309	skin:	n/a
38	chr10:90519680-90519730	HEEpiC	esophagus:	n/a
39	chr10:90519680-90519730	Jurkat	blood:	n/a
40	chr10:90519680-90519730	PrEC	prostate:	n/a
41	chr10:90519680-90519730	AoSMC	blood vessel:	n/a
42	chr10:90519680-90519730	HPAEpiC	pulmonary alveolar:	n/a
43	chr10:90519680-90519730	HMEC	breast:	n/a
44	chr10:90519680-90519730	RPTEC	kidney:	n/a
45	chr10:90519680-90519730	LNCaP	prostate:	n/a
46	chr10:90519680-90519730	SK-N-MC	brain:	n/a
47	chr10:90519680-90519730	GM12878	blood:	n/a
48	chr10:90519680-90519730	ECC-1	luminal epithelium:	n/a
49	chr10:90519680-90519730	GM12892	blood:	n/a
50	chr10:90519680-90519730	PFSK-1	brain:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:90515063..90517764-chr10:90518050..90519657,2	MCF-7	breast:

Variant related genes	Relation type
LIPN	TF binding region
LIPN	CpG island

Extended variants
information (count: 389 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:389 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs565448988	chr10:90519018-90519019	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs529841748	chr10:90519019-90519020	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs547853163	chr10:90519092-90519093	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs569665708	chr10:90519093-90519094	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs538119214	chr10:90519144-90519145	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs181071421	chr10:90519187-90519188	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs74464727	chr10:90519190-90519191	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs137997946	chr10:90519278-90519279	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs554446493	chr10:90519351-90519352	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs572446638	chr10:90519356-90519357	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs142337694	chr10:90519379-90519380	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs554651054	chr10:90519383-90519384	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs303461	chr10:90519392-90519393	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs543327094	chr10:90519452-90519453	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs564841281	chr10:90519476-90519477	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs576590838	chr10:90519520-90519521	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs540821950	chr10:90519615-90519616	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs144578136	chr10:90519674-90519675	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs529735310	chr10:90519719-90519720	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
20	rs541824835	chr10:90519752-90519753	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs548278613	chr10:90519760-90519761	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs74991134	chr10:90519803-90519804	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs72824220	chr10:90519813-90519814	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs550454908	chr10:90519845-90519846	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs571959366	chr10:90519854-90519855	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs185996512	chr10:90519934-90519935	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs534539968	chr10:90519944-90519945	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs547989789	chr10:90519961-90519962	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs7091509	chr10:90519980-90519981	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs577697710	chr10:90519982-90519983	Weak transcription Flanking Active TSS Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs192104929	chr10:90520033-90520034	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs144618756	chr10:90520039-90520040	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs303462	chr10:90520101-90520102	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs148031672	chr10:90520215-90520216	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs558570538	chr10:90520262-90520263	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs303463	chr10:90520269-90520270	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs540959056	chr10:90520316-90520317	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs183471160	chr10:90520318-90520319	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs574593528	chr10:90520367-90520368	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs557025951	chr10:90520405-90520406	Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs563406463	chr10:90520414-90520415	Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs530559493	chr10:90520547-90520548	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs185961747	chr10:90520551-90520552	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs303464	chr10:90520562-90520563	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs543300232	chr10:90520578-90520579	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs532839824	chr10:90520591-90520592	Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs548125263	chr10:90520607-90520608	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs566114153	chr10:90520614-90520615	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs386746342	chr10:90520648-90520649	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs113157443	chr10:90520649-90520650	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Colorectal cancer	19359472	CNVD
Neurocytoma	17123091	CNVD
Prostate cancer	16461572	CNVD
Basal-like breast cancer	18066063	CNVD
Effusion lymphoma	18079361	CNVD
Prostate cancer	21147910	CNVD
Lung cancer	21911935	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	22048815	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Glioblastoma multiforme	19435819	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Bipolar disorder	19114987	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90514600-90519400	Weak transcription	HSMM	muscle
2	chr10:90514600-90523200	Weak transcription	NHEK	skin
3	chr10:90514800-90523400	Weak transcription	Hela-S3	cervix
4	chr10:90515000-90523200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:90515400-90519000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr10:90515400-90519400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:90518400-90519400	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr10:90518600-90519000	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr10:90518800-90519800	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr10:90519000-90519400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:90519000-90519400	Enhancers	Muscle Satellite Cultured Cells	--
12	chr10:90519000-90519400	Enhancers	Adipose Nuclei	Adipose
13	chr10:90519000-90521400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr10:90519200-90519600	Enhancers	Brain Substantia Nigra	brain
15	chr10:90519200-90519800	Enhancers	Sigmoid Colon	Sigmoid Colon
16	chr10:90519200-90520000	Enhancers	Primary B cells from peripheral blood	blood
17	chr10:90519200-90520000	Enhancers	Esophagus	oesophagus
18	chr10:90519400-90519600	Enhancers	HSMM	muscle
19	chr10:90519400-90519800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr10:90519400-90520000	Enhancers	Primary T cells from cord blood	blood
21	chr10:90519400-90520000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
22	chr10:90519400-90521000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
23	chr10:90519400-90523400	Weak transcription	Adipose Nuclei	Adipose
24	chr10:90519600-90520000	Enhancers	Primary T helper cells PMA-I stimulated	--
25	chr10:90519600-90520000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
26	chr10:90519600-90520000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
27	chr10:90519600-90520800	Active TSS	Primary B cells from cord blood	blood
28	chr10:90519800-90520200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
29	chr10:90520200-90520400	Enhancers	Primary monocytes fromperipheralblood	blood
30	chr10:90520400-90520600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
31	chr10:90520600-90521000	Enhancers	Primary monocytes fromperipheralblood	blood
32	chr10:90521000-90521600	Enhancers	Primary neutrophils fromperipheralblood	blood
33	chr10:90521000-90522000	Weak transcription	Primary monocytes fromperipheralblood	blood
34	chr10:90521400-90521600	Enhancers	Monocytes-CD14+_RO01746	blood
35	chr10:90521600-90522200	Genic enhancers	Monocytes-CD14+_RO01746	blood
36	chr10:90521600-90525200	Genic enhancers	Primary neutrophils fromperipheralblood	blood
37	chr10:90522000-90522600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr10:90522000-90523000	Strong transcription	Primary monocytes fromperipheralblood	blood
39	chr10:90522000-90524400	Enhancers	GM12878-XiMat	blood
40	chr10:90522200-90522400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr10:90522200-90523200	Strong transcription	Monocytes-CD14+_RO01746	blood
42	chr10:90522600-90526600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr10:90523000-90523400	Weak transcription	Primary monocytes fromperipheralblood	blood
44	chr10:90523200-90523600	Enhancers	Ovary	ovary
45	chr10:90523200-90523600	Enhancers	NHEK	skin
46	chr10:90523200-90523800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr10:90523200-90523800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr10:90523200-90525400	Genic enhancers	Monocytes-CD14+_RO01746	blood
49	chr10:90523400-90523600	Enhancers	Adipose Nuclei	Adipose
50	chr10:90523400-90523800	Enhancers	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links