Variant report
Variant | nsv825954 |
---|---|
Chromosome Location | chr11:65792840-65803470 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:56)
- CpG islands (count:427)
- Chromatin interactive region (count:17)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:65800502-65800794 | HepG2 | liver: | n/a | n/a |
2 | BHLHE40 | chr11:65792622-65792860 | K562 | blood: | n/a | n/a |
3 | CEBPB | chr11:65798830-65798934 | Hela-S3 | cervix: | n/a | n/a |
4 | CEBPB | chr11:65800512-65800574 | K562 | blood: | n/a | n/a |
5 | CEBPB | chr11:65800481-65800617 | Hela-S3 | cervix: | n/a | n/a |
6 | CEBPB | chr11:65800394-65800702 | MCF-7 | breast: | n/a | n/a |
7 | CTCF | chr11:65800463-65800566 | LNCaP | prostate: | n/a | n/a |
8 | CTCF | chr11:65803252-65803359 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
9 | CTCF | chr11:65803251-65803366 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
10 | CTCF | chr11:65803220-65803370 | A549 | lung: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
11 | CTCF | chr11:65803200-65803350 | Hela-S3 | cervix: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
12 | CTCF | chr11:65803192-65803444 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
13 | CTCF | chr11:65803180-65803330 | WERI-Rb-1 | eye: | n/a | n/a |
14 | CTCF | chr11:65803280-65803430 | A549 | lung: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
15 | CTCF | chr11:65803241-65803392 | Hela-S3 | cervix: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
16 | CTCF | chr11:65793540-65793690 | K562 | blood: | n/a | n/a |
17 | CTCF | chr11:65803440-65803590 | GM06990 | blood: | n/a | n/a |
18 | CTCF | chr11:65803300-65803450 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
19 | CTCF | chr11:65803220-65803370 | HCT-116 | colon: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
20 | CTCF | chr11:65803239-65803367 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
21 | CTCF | chr11:65803160-65803310 | RPTEC | kidney: | n/a | n/a |
22 | CTCF | chr11:65803245-65803383 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
23 | CTCF | chr11:65803237-65803373 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
24 | CTCF | chr11:65803240-65803390 | MCF-7 | breast: | n/a | chr11:65803315-65803333 chr11:65803317-65803338 |
25 | FOS | chr11:65798740-65799085 | MCF10A-Er-Src | breast: | n/a | n/a |
26 | FOS | chr11:65798740-65799069 | MCF10A-Er-Src | breast: | n/a | n/a |
27 | FOS | chr11:65798731-65799069 | MCF10A-Er-Src | breast: | n/a | n/a |
28 | FOS | chr11:65798742-65799082 | MCF10A-Er-Src | breast: | n/a | n/a |
29 | FOSL2 | chr11:65798691-65799055 | HepG2 | liver: | n/a | n/a |
30 | FOXA1 | chr11:65800461-65800812 | HepG2 | liver: | n/a | n/a |
31 | FOXA1 | chr11:65800503-65800898 | HepG2 | liver: | n/a | n/a |
32 | FOXA2 | chr11:65800538-65800794 | HepG2 | liver: | n/a | n/a |
33 | JUN | chr11:65798822-65798954 | HepG2 | liver: | n/a | n/a |
34 | JUND | chr11:65798752-65799066 | HepG2 | liver: | n/a | chr11:65798890-65798901 |
35 | JUND | chr11:65798767-65799032 | Hela-S3 | cervix: | n/a | chr11:65798890-65798901 |
36 | JUND | chr11:65798799-65798933 | HepG2 | liver: | n/a | chr11:65798890-65798901 |
37 | JUND | chr11:65798784-65798986 | HepG2 | liver: | n/a | chr11:65798890-65798901 |
38 | JUND | chr11:65798827-65799007 | K562 | blood: | n/a | chr11:65798890-65798901 |
39 | MYC | chr11:65798796-65799033 | MCF10A-Er-Src | breast: | n/a | n/a |
40 | MYC | chr11:65798779-65798979 | MCF10A-Er-Src | breast: | n/a | n/a |
41 | MYC | chr11:65792918-65793014 | MCF-7 | breast: | n/a | n/a |
42 | POLR2A | chr11:65792919-65792968 | MCF-7 | breast: | n/a | n/a |
43 | POLR2A | chr11:65792903-65792915 | MCF-7 | breast: | n/a | n/a |
44 | POLR2A | chr11:65801755-65801852 | K562 | blood: | n/a | n/a |
45 | POLR2A | chr11:65792916-65793069 | MCF-7 | breast: | n/a | n/a |
46 | POLR2A | chr11:65803252-65803268 | K562 | blood: | n/a | n/a |
47 | POLR2A | chr11:65793150-65793178 | MCF-7 | breast: | n/a | n/a |
48 | POLR2A | chr11:65802828-65802845 | K562 | blood: | n/a | n/a |
49 | POLR2A | chr11:65793076-65793077 | MCF-7 | breast: | n/a | n/a |
50 | RAD21 | chr11:65803170-65803419 | MCF-7 | breast: | n/a | chr11:65803316-65803335 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:65794191-65794241 | H1-hESC | embryonic stem cell: | embryo |
2 | chr11:65793986-65794036 | HRCEpiC | kidney: | n/a |
3 | chr11:65794191-65794241 | NH-A | brain: | n/a |
4 | chr11:65793525-65793575 | CMK | blood: | n/a |
5 | chr11:65794191-65794241 | ovcar-3 | ovarian: | n/a |
6 | chr11:65794062-65794112 | A549 | lung: | n/a |
7 | chr11:65794352-65794402 | BE2_C | brain: | n/a |
8 | chr11:65794062-65794112 | HRE | kidney: | n/a |
9 | chr11:65793706-65793756 | H1-hESC | embryonic stem cell: | embryo |
10 | chr11:65794352-65794402 | NT2-D1 | testis: | n/a |
11 | chr11:65794191-65794241 | HAEpiC | amniotic membrane: | n/a |
12 | chr11:65794191-65794241 | NT2-D1 | testis: | n/a |
13 | chr11:65793706-65793756 | MCF-7 | breast: | n/a |
14 | chr11:65793238-65793288 | CMK | blood: | n/a |
15 | chr11:65793238-65793288 | HepG2 | liver: | n/a |
16 | chr11:65794062-65794112 | Caco-2 | colon: | n/a |
17 | chr11:65793986-65794036 | NHBE | bronchial: | n/a |
18 | chr11:65793525-65793575 | PANC-1 | pancreas: | n/a |
19 | chr11:65793525-65793575 | ECC-1 | luminal epithelium: | n/a |
20 | chr11:65794062-65794112 | GM19239 | blood: | n/a |
21 | chr11:65793706-65793756 | HCT-116 | colon: | n/a |
22 | chr11:65793525-65793575 | HAEpiC | amniotic membrane: | n/a |
23 | chr11:65793706-65793756 | SK-N-MC | brain: | n/a |
24 | chr11:65794352-65794402 | HPAEpiC | pulmonary alveolar: | n/a |
25 | chr11:65793525-65793575 | PrEC | prostate: | n/a |
26 | chr11:65793238-65793288 | GM19239 | blood: | n/a |
27 | chr11:65794191-65794241 | ProgFib | skin: | n/a |
28 | chr11:65793986-65794036 | ECC-1 | luminal epithelium: | n/a |
29 | chr11:65794352-65794402 | Hela-S3 | cervix: | n/a |
30 | chr11:65794062-65794112 | HAEpiC | amniotic membrane: | n/a |
31 | chr11:65794191-65794241 | HIPEpiC | eye: | n/a |
32 | chr11:65793238-65793288 | SKMC | muscle: | n/a |
33 | chr11:65793525-65793575 | AoSMC | blood vessel: | n/a |
34 | chr11:65793706-65793756 | ProgFib | skin: | n/a |
35 | chr11:65794352-65794402 | Jurkat | blood: | n/a |
36 | chr11:65793238-65793288 | HCT-116 | colon: | n/a |
37 | chr11:65793986-65794036 | AG09319 | gingival: | n/a |
38 | chr11:65794062-65794112 | AG09319 | gingival: | n/a |
39 | chr11:65793525-65793575 | GM12878 | blood: | n/a |
40 | chr11:65794191-65794241 | SK-N-MC | brain: | n/a |
41 | chr11:65793525-65793575 | SK-N-MC | brain: | n/a |
42 | chr11:65793986-65794036 | IMR90 | lung: | fetal |
43 | chr11:65794352-65794402 | GM12892 | blood: | n/a |
44 | chr11:65793238-65793288 | ovcar-3 | ovarian: | n/a |
45 | chr11:65794352-65794402 | SKMC | muscle: | n/a |
46 | chr11:65794191-65794241 | NHDF-neo | bronchial: | n/a |
47 | chr11:65794062-65794112 | GM06990 | blood: | n/a |
48 | chr11:65793986-65794036 | GM12891 | blood: | n/a |
49 | chr11:65793238-65793288 | HNPCEpiC | eye: | n/a |
50 | chr11:65793706-65793756 | CMK | blood: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:65802624..65805080-chr11:65807648..65810087,2 | K562 | blood: | |
2 | chr11:65657179..65659552-chr11:65792099..65795097,2 | MCF-7 | breast: | |
3 | chr11:65778738..65782540-chr11:65791690..65794306,3 | MCF-7 | breast: | |
4 | chr11:65774540..65776396-chr11:65801301..65804263,2 | MCF-7 | breast: | |
5 | chr11:65657243..65659691-chr11:65793625..65795769,2 | K562 | blood: | |
6 | chr11:65762816..65765321-chr11:65799547..65802531,2 | MCF-7 | breast: | |
7 | chr11:65791115..65793279-chr11:65800928..65803391,2 | MCF-7 | breast: | |
8 | chr11:65802871..65803569-chr11:65812357..65812898,2 | MCF-7 | breast: | |
9 | chr11:65799174..65802005-chr11:65821311..65824271,2 | MCF-7 | breast: | |
10 | chr11:65790800..65793677-chr11:65804088..65806843,2 | MCF-7 | breast: | |
11 | chr11:65769812..65778104-chr11:65786537..65794453,15 | K562 | blood: | |
12 | chr11:65791225..65793923-chr11:65817959..65820856,2 | K562 | blood: | |
13 | chr11:65801882..65803649-chr11:65821378..65823730,2 | K562 | blood: | |
14 | chr11:65791115..65793279-chr11:65800928..65803391,2 | MCF-7 | breast: | |
15 | chr11:65792938..65795924-chr11:65797637..65800432,2 | MCF-7 | breast: | |
16 | chr11:65792176..65796965-chr11:65812595..65817477,5 | MCF-7 | breast: | |
17 | chr11:65788506..65790955-chr11:65792237..65795353,3 | MCF-7 | breast: |
(count:1 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-CST6-2 | chr11:65796622-65796862 | expReg_chr11_6351_+ |
No data |
No data |
Variant related genes | Relation type |
---|---|
CATSPER1 | TF binding region |
CATSPER1 | CpG island |
ENSG00000087365 | chromatin interactions |
ENSG00000175315 | chromatin interactions |
ENSG00000238752 | chromatin interactions |
ENSG00000175229 | chromatin interactions |
ENSG00000175334 | chromatin interactions |
ENSG00000175602 | chromatin interactions |
ENSG00000175294 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs114764419 | chr11:65792855-65792856 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
2 | rs142296641 | chr11:65792856-65792857 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
3 | rs201390042 | chr11:65792861-65792862 | Enhancers Active TSS Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
4 | rs375751217 | chr11:65792862-65792863 | Enhancers Active TSS Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
5 | rs200608739 | chr11:65792897-65792898 | Enhancers Active TSS Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
6 | rs193929391 | chr11:65792902-65792903 | Enhancers Active TSS Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
7 | rs199848950 | chr11:65792903-65792904 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
8 | rs148686517 | chr11:65792904-65792905 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
9 | rs113730172 | chr11:65792911-65792912 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
10 | rs368165391 | chr11:65792924-65792925 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
11 | rs138686285 | chr11:65792927-65792928 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
12 | rs141376441 | chr11:65792928-65792929 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
13 | rs370786090 | chr11:65792929-65792930 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
14 | rs570358467 | chr11:65792930-65792931 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
15 | rs143520345 | chr11:65792932-65792933 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
16 | rs148010566 | chr11:65792933-65792934 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
17 | rs370635615 | chr11:65792961-65792962 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
18 | rs374112491 | chr11:65792962-65792963 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
19 | rs141659121 | chr11:65792967-65792968 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
20 | rs150803613 | chr11:65792968-65792969 | Enhancers Active TSS Weak transcription | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
21 | rs150884482 | chr11:65793011-65793012 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
22 | rs534823391 | chr11:65793013-65793014 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
23 | rs201195978 | chr11:65793016-65793017 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
24 | rs576829972 | chr11:65793028-65793029 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
25 | rs371489713 | chr11:65793038-65793039 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
26 | rs368688295 | chr11:65793053-65793054 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
27 | rs138388451 | chr11:65793055-65793056 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
28 | rs139056553 | chr11:65793056-65793057 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
29 | rs372082637 | chr11:65793078-65793079 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
30 | rs375184637 | chr11:65793079-65793080 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
31 | rs199940038 | chr11:65793090-65793091 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
32 | rs79062509 | chr11:65793121-65793122 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
33 | rs200806107 | chr11:65793127-65793128 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
34 | rs192856378 | chr11:65793140-65793141 | Weak transcription Active TSS | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
35 | rs149769183 | chr11:65793156-65793157 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
36 | rs74794071 | chr11:65793162-65793163 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
37 | rs113202862 | chr11:65793163-65793164 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
38 | rs202130764 | chr11:65793168-65793169 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
39 | rs372432257 | chr11:65793173-65793174 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
40 | rs370358531 | chr11:65793176-65793177 | Weak transcription Active TSS | TF binding regionChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
41 | rs201253357 | chr11:65793208-65793209 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
42 | rs369397065 | chr11:65793238-65793239 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | CpG islandChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
43 | rs372650214 | chr11:65793241-65793242 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | CpG islandChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
44 | rs142855965 | chr11:65793251-65793252 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | CpG islandChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
45 | rs199771570 | chr11:65793255-65793256 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | CpG islandChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
46 | rs375411792 | chr11:65793269-65793270 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | CpG islandChromatin interactive region | 8 gene(s) | Overlapped CNVs | n/a |
47 | rs369936891 | chr11:65793311-65793312 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
48 | rs150987227 | chr11:65793336-65793337 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
49 | rs142151431 | chr11:65793343-65793344 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
50 | rs543744984 | chr11:65793355-65793356 | ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription | Chromatin interactive region | 7 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Wilms tumour | 21544195 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Breast cancer | 21364760 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Pituitary adenoma | 18645599 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Smith-Lemli-Opitz syndrome | 21572526 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Cancer | 16751803 | CNVD |
Seminomas | 18059402 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Chordoma | 21602918 | CNVD |
Melanoma | 18172304 | CNVD |
Chordoma | 18071362 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
ovarian endometriomas | 16273235 | CNVD |
Breast cancer | 16417655 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Prostate cancer | 17217626 | CNVD |
T-cell acute lymphoblastic leukemia | 19406988 | CNVD |
Breast cancer | 21045282 | CNVD |
Breast cancer | 21806811 | CNVD |
Breast cancer | 22002566 | CNVD |
Ductal carcinoma | 18381933 | CNVD |
Retinoblastoma | 22278416 | CNVD |
Breast cancer | 20953835 | CNVD |
oto-dental syndrome | 17656375 | CNVD |
Asthma | 21956041 | CNVD |
Breast cancer | 17603634 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Cervical cancer | 21062161 | CNVD |
Breast cancer | 21509527 | CNVD |
Anaplastic thyroid cancer | 18753363 | CNVD |
Prostate cancer | 18779856 | CNVD |
Cancer | 17160897 | CNVD |
Breast cancer | 17001317 | CNVD |
Oral squamous cell carcinoma | 16619035 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Colorectal cancer | 16882699 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668395 | CNVD |
Spinal muscular atrophy | 17668395 | CNVD |
Neonatal seizures | 17668395 | CNVD |
Neonatal seizures | 17668391 | CNVD |
Neuroticism | 17667963 | CNVD |
Cancer | 17916600 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Multiple endocrine neoplasia type 1 | 19566914 | CNVD |
XY sex reversal | 17503084 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668391 | CNVD |
Maculopathy | 17646752 | CNVD |
Breast cancer | 17899364 | CNVD |
Breast cancer | 17157792 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:65783400-65811200 | Weak transcription | Aorta | Aorta |
2 | chr11:65790000-65800800 | Weak transcription | HSMMtube | muscle |
3 | chr11:65790400-65812600 | Weak transcription | Right Atrium | heart |
4 | chr11:65790400-65818600 | Weak transcription | HSMM | muscle |
5 | chr11:65792600-65793000 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
6 | chr11:65792600-65793200 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
7 | chr11:65793000-65793200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
8 | chr11:65793200-65793600 | Flanking Bivalent TSS/Enh | Foreskin Fibroblast Primary Cells skin02 | Skin |
9 | chr11:65793200-65794400 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
10 | chr11:65793600-65793800 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin02 | Skin |
11 | chr11:65794400-65804400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
12 | chr11:65795200-65795600 | Bivalent/Poised TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
13 | chr11:65798600-65799400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
14 | chr11:65799000-65799200 | Enhancers | Lung | lung |
15 | chr11:65799200-65799400 | Weak transcription | Lung | lung |
16 | chr11:65800400-65801000 | Enhancers | A549 | lung |
17 | chr11:65802200-65802400 | Bivalent Enhancer | Skeletal Muscle Male | skeletal muscle |
18 | chr11:65803200-65804000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
19 | chr11:65803400-65803600 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin02 | Skin |
20 | chr11:65803400-65803800 | Enhancers | Adipose Nuclei | Adipose |
21 | chr11:65803400-65804000 | Enhancers | Cortex derived primary cultured neurospheres | brain |