Variant report

Variant nsv826349
Chromosome Location chr12:41878846-41911495
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:181 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:41869600-41905200 Weak transcription Colon Smooth Muscle Colon
2 chr12:41877400-41903600 Weak transcription Ovary ovary
3 chr12:41878400-41879000 Enhancers HUVEC blood vessel
4 chr12:41878800-41879200 Enhancers Right Atrium heart
5 chr12:41878800-41879400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:41879000-41879200 Flanking Active TSS GM12878-XiMat blood
7 chr12:41879000-41879200 Enhancers HMEC breast
8 chr12:41879000-41879600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:41879000-41879800 Flanking Active TSS HUVEC blood vessel
10 chr12:41879200-41879400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:41879200-41879400 Active TSS GM12878-XiMat blood
12 chr12:41879200-41880200 Weak transcription HMEC breast
13 chr12:41879400-41880400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr12:41879600-41880000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:41879800-41881200 Enhancers HUVEC blood vessel
16 chr12:41880000-41880400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:41880200-41880600 Enhancers HMEC breast
18 chr12:41880400-41880800 Enhancers iPS-20b Cell Line embryonic stem cell
19 chr12:41880400-41880800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr12:41880400-41880800 Bivalent Enhancer Aorta Aorta
21 chr12:41880600-41881200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr12:41880600-41881800 Enhancers Brain Germinal Matrix brain
23 chr12:41881800-41887000 Weak transcription Brain Germinal Matrix brain
24 chr12:41886200-41887400 Enhancers Brain Anterior Caudate brain
25 chr12:41886200-41887400 Enhancers Brain Substantia Nigra brain
26 chr12:41886200-41891800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr12:41886600-41887000 Active TSS Brain Hippocampus Middle brain
28 chr12:41886600-41887800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr12:41887000-41887200 Flanking Active TSS Brain Hippocampus Middle brain
30 chr12:41887000-41887800 Enhancers Brain Germinal Matrix brain
31 chr12:41887200-41887600 Enhancers Brain Hippocampus Middle brain
32 chr12:41887400-41887600 Flanking Active TSS Brain Substantia Nigra brain
33 chr12:41887400-41888400 Weak transcription Brain Anterior Caudate brain
34 chr12:41887600-41901400 Weak transcription Brain Substantia Nigra brain
35 chr12:41887800-41893600 Weak transcription Brain Germinal Matrix brain
36 chr12:41888000-41891400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr12:41888400-41888800 Enhancers Brain Anterior Caudate brain
38 chr12:41888400-41889000 Enhancers ES-I3 Cell Line embryonic stem cell
39 chr12:41888600-41889000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:41889000-41890000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr12:41889600-41890400 Enhancers Psoas Muscle Psoas
42 chr12:41890000-41890200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:41890000-41890600 Enhancers HUVEC blood vessel
44 chr12:41890200-41890800 Enhancers Skeletal Muscle Male skeletal muscle
45 chr12:41890400-41895200 Weak transcription Psoas Muscle Psoas
46 chr12:41891000-41891600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr12:41891200-41891600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr12:41891400-41893400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr12:41891800-41893400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr12:41893400-41894000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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