Variant report

Variant	nsv826795
Chromosome Location	chr13:110425465-110448628
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1539)
CpG islands
(count:1954)
Chromatin interactive
region (count:55)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1539 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:110439189-110439250	K562	blood:	n/a	n/a
2	ARID3A	chr13:110443363-110444054	K562	blood:	n/a	n/a
3	ATF1	chr13:110425676-110425963	K562	blood:	n/a	n/a
4	ATF3	chr13:110425616-110425940	K562	blood:	n/a	n/a
5	BACH1	chr13:110438037-110438193	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr13:110439162-110439355	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr13:110437536-110437689	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr13:110436949-110437136	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr13:110443178-110443554	K562	blood:	n/a	n/a
10	BACH1	chr13:110439610-110439935	H1-hESC	embryonic stem cell:	n/a	n/a
11	BATF	chr13:110444816-110445103	GM12878	blood:	n/a	n/a
12	BHLHE40	chr13:110438776-110439348	K562	blood:	n/a	n/a
13	BHLHE40	chr13:110443585-110444009	K562	blood:	n/a	n/a
14	BHLHE40	chr13:110430608-110430953	K562	blood:	n/a	n/a
15	BHLHE40	chr13:110438833-110439061	GM12878	blood:	n/a	n/a
16	BHLHE40	chr13:110443862-110443866	GM12878	blood:	n/a	n/a
17	BRCA1	chr13:110434393-110434406	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr13:110443173-110444063	Hela-S3	cervix:	n/a	n/a
19	BRCA1	chr13:110438824-110439391	Hela-S3	cervix:	n/a	n/a
20	BRCA1	chr13:110432478-110433039	Hela-S3	cervix:	n/a	n/a
21	BRCA1	chr13:110437026-110437199	Hela-S3	cervix:	n/a	n/a
22	CBX3	chr13:110430390-110430680	K562	blood:	n/a	n/a
23	CBX3	chr13:110438770-110439071	K562	blood:	n/a	n/a
24	CBX3	chr13:110430306-110430919	HCT-116	colon:	n/a	n/a
25	CCNT2	chr13:110438073-110440307	K562	blood:	n/a	chr13:110440103-110440112 chr13:110439148-110439157 chr13:110439278-110439287
26	CCNT2	chr13:110443678-110443939	K562	blood:	n/a	n/a
27	CEBPB	chr13:110447316-110447549	A549	lung:	n/a	chr13:110447385-110447396
28	CEBPB	chr13:110442524-110442786	IMR90	lung:	n/a	n/a
29	CEBPB	chr13:110443571-110444030	A549	lung:	n/a	n/a
30	CEBPB	chr13:110447318-110447794	MCF-7	breast:	n/a	chr13:110447385-110447396
31	CEBPB	chr13:110443246-110443990	K562	blood:	n/a	chr13:110443334-110443345
32	CEBPB	chr13:110443635-110443954	K562	blood:	n/a	n/a
33	CEBPB	chr13:110439589-110439732	K562	blood:	n/a	n/a
34	CEBPB	chr13:110436946-110437196	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr13:110447267-110447550	HepG2	liver:	n/a	chr13:110447385-110447396
36	CEBPB	chr13:110447262-110447751	MCF-7	breast:	n/a	chr13:110447385-110447396
37	CEBPB	chr13:110442469-110442801	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr13:110438769-110439370	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr13:110438162-110438328	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr13:110443243-110443442	HepG2	liver:	n/a	chr13:110443334-110443345
41	CEBPB	chr13:110438849-110439087	K562	blood:	n/a	n/a
42	CEBPB	chr13:110443153-110444063	Hela-S3	cervix:	n/a	chr13:110443334-110443345
43	CEBPB	chr13:110441297-110441305	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr13:110442516-110442781	A549	lung:	n/a	n/a
45	CEBPB	chr13:110447287-110447530	IMR90	lung:	n/a	chr13:110447385-110447396
46	CEBPB	chr13:110443186-110443529	A549	lung:	n/a	chr13:110443334-110443345
47	CEBPB	chr13:110444394-110444701	K562	blood:	n/a	chr13:110444584-110444595 chr13:110444546-110444559 chr13:110444584-110444595
48	CEBPB	chr13:110447322-110447693	Hela-S3	cervix:	n/a	chr13:110447385-110447396
49	CEBPB	chr13:110439228-110439244	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr13:110438843-110439089	A549	lung:	n/a	n/a

(count:1954 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:110431612-110431662	HRPEpiC	eye:	n/a
2	chr13:110438916-110438966	HCT-116	colon:	n/a
3	chr13:110431612-110431662	HRPEpiC	eye:	n/a
4	chr13:110438916-110438966	HCT-116	colon:	n/a
5	chr13:110439004-110439054	HCF	heart:	n/a
6	chr13:110439006-110439056	Caco-2	colon:	n/a
7	chr13:110432935-110432985	SK-N-MC	brain:	n/a
8	chr13:110440352-110440402	BE2_C	brain:	n/a
9	chr13:110438578-110438628	ProgFib	skin:	n/a
10	chr13:110439453-110439503	GM12892	blood:	n/a
11	chr13:110434682-110434732	HIPEpiC	eye:	n/a
12	chr13:110434467-110434517	HMEC	breast:	n/a
13	chr13:110433636-110433686	HUVEC	blood vessel:	n/a
14	chr13:110438937-110438987	HEK293	kidney:	embryo
15	chr13:110436780-110436830	HCF	heart:	n/a
16	chr13:110434467-110434517	HIPEpiC	eye:	n/a
17	chr13:110438578-110438628	T-47D	breast:	n/a
18	chr13:110440179-110440229	Jurkat	blood:	n/a
19	chr13:110438935-110438985	HIPEpiC	eye:	n/a
20	chr13:110437759-110437809	NT2-D1	testis:	n/a
21	chr13:110425835-110425885	HCT-116	colon:	n/a
22	chr13:110443740-110443790	Caco-2	colon:	n/a
23	chr13:110432935-110432985	BJ	skin:	n/a
24	chr13:110434682-110434732	HRE	kidney:	n/a
25	chr13:110438288-110438338	T-47D	breast:	n/a
26	chr13:110436111-110436161	HNPCEpiC	eye:	n/a
27	chr13:110440179-110440229	GM12891	blood:	n/a
28	chr13:110440179-110440229	HepG2	liver:	n/a
29	chr13:110438578-110438628	Hela-S3	cervix:	n/a
30	chr13:110425835-110425885	RPTEC	kidney:	n/a
31	chr13:110438288-110438338	BJ	skin:	n/a
32	chr13:110437759-110437809	NHBE	bronchial:	n/a
33	chr13:110432220-110432270	K562	blood:	n/a
34	chr13:110438906-110438956	T-47D	breast:	n/a
35	chr13:110438578-110438628	PFSK-1	brain:	n/a
36	chr13:110438288-110438338	HEK293	kidney:	embryo
37	chr13:110432220-110432270	HCM	heart:	n/a
38	chr13:110432220-110432270	HNPCEpiC	eye:	n/a
39	chr13:110438916-110438966	HUVEC	blood vessel:	n/a
40	chr13:110438906-110438956	AoSMC	blood vessel:	n/a
41	chr13:110434682-110434732	HUVEC	blood vessel:	n/a
42	chr13:110436740-110436790	HEEpiC	esophagus:	n/a
43	chr13:110438256-110438306	SK-N-MC	brain:	n/a
44	chr13:110438288-110438338	NHBE	bronchial:	n/a
45	chr13:110438935-110438985	HMEC	breast:	n/a
46	chr13:110440175-110440225	HAEpiC	amniotic membrane:	n/a
47	chr13:110436740-110436790	T-47D	breast:	n/a
48	chr13:110436780-110436830	HRPEpiC	eye:	n/a
49	chr13:110439004-110439054	BJ	skin:	n/a
50	chr13:110436111-110436161	LNCaP	prostate:	n/a

(count:55 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr13:110404473..110407455-chr13:110429957..110432658,3	K562	blood:
2	chr13:110437769..110438360-chr13:111365491..111366397,2	NB4	blood:
3	chr13:110433484..110434398-chr6:26157776..26158704,2	Hela-S3	cervix:
4	chr13:110359448..110362939-chr13:110431472..110434391,4	K562	blood:
5	chr13:110355569..110358710-chr13:110439541..110442319,3	MCF-7	breast:
6	chr13:110436751..110439259-chr13:111364404..111367804,3	K562	blood:
7	chr13:110262551..110263536-chr13:110436991..110438083,3	MCF-7	breast:
8	chr13:110372207..110373827-chr13:110434766..110436789,2	K562	blood:
9	chr13:110438627..110439624-chr2:32502857..32503409,2	NB4	blood:
10	chr13:110431371..110432927-chr13:111365497..111367425,2	K562	blood:
11	chr13:21347448..21348138-chr13:110438450..110439192,2	NB4	blood:
12	chr13:110372327..110374107-chr13:110434766..110436742,2	K562	blood:
13	chr13:110403771..110406116-chr13:110433660..110436383,2	K562	blood:
14	chr13:110439408..110440218-chr17:26368504..26369181,2	Hela-S3	cervix:
15	chr12:52448921..52449564-chr13:110433424..110434327,2	Hela-S3	cervix:
16	chr13:52026999..52027561-chr13:110438389..110438889,2	NB4	blood:
17	chr13:110430383..110434613-chr13:110438487..110441138,4	MCF-7	breast:
18	chr13:110439300..110440162-chr3:50336111..50336962,2	Hela-S3	cervix:
19	chr13:110437609..110438511-chr2:70520669..70521396,2	Hela-S3	cervix:
20	chr13:110443953..110447179-chr13:110758507..110762069,3	MCF-7	breast:
21	chr13:110436751..110439195-chr13:111365292..111367804,2	K562	blood:
22	chr13:110413885..110415752-chr13:110436312..110438893,2	MCF-7	breast:
23	chr13:110443809..110446667-chr13:110447479..110449756,2	K562	blood:
24	chr13:110395852..110397862-chr13:110423883..110426288,2	K562	blood:
25	chr13:110443161..110443801-chr7:92076313..92077051,2	NB4	blood:
26	chr13:45010548..45011431-chr13:110438404..110439086,2	Hela-S3	cervix:
27	chr13:110437956..110438456-chr2:100106242..100106983,2	K562	blood:
28	chr13:110443809..110446667-chr13:110447479..110449756,2	K562	blood:
29	chr13:110437931..110439923-chr13:110442337..110443965,2	MCF-7	breast:
30	chr13:110387460..110391261-chr13:110433185..110436412,3	K562	blood:
31	chr1:145382581..145383105-chr13:110438820..110439782,2	Hela-S3	cervix:
32	chr13:110348737..110350886-chr13:110432945..110435656,2	K562	blood:
33	chr13:110436747..110437632-chr2:157188777..157189594,2	Hela-S3	cervix:
34	chr13:110173341..110174851-chr13:110433335..110435967,2	MCF-7	breast:
35	chr13:110308109..110310593-chr13:110433626..110436596,2	K562	blood:
36	chr13:109611837..109614642-chr13:110445728..110448181,2	MCF-7	breast:
37	chr13:109797639..109798548-chr13:110436659..110437260,3	MCF-7	breast:
38	chr13:110435545..110437326-chr13:110470827..110473616,2	K562	blood:
39	chr13:110446043..110447587-chr13:110455015..110457725,2	MCF-7	breast:
40	chr13:110336875..110340182-chr13:110433980..110437911,3	K562	blood:
41	chr13:110347663..110350324-chr13:110443673..110445306,2	K562	blood:
42	chr13:110438834..110439674-chr3:197686852..197687479,2	Hela-S3	cervix:
43	chr13:110397775..110399986-chr13:110436393..110438798,2	MCF-7	breast:
44	chr13:110414170..110416819-chr13:110432906..110435378,2	K562	blood:
45	chr13:110079830..110080650-chr13:110436980..110437762,2	MCF-7	breast:
46	chr13:109797385..109798328-chr13:110443580..110444081,2	MCF-7	breast:
47	chr13:110367353..110370316-chr13:110433831..110435383,2	K562	blood:
48	chr13:110406850..110408586-chr13:110434989..110436543,2	K562	blood:
49	chr13:110438443..110438962-chr16:2285162..2286129,2	NB4	blood:
50	chr13:110438846..110439621-chr8:125485961..125486658,2	Hela-S3	cervix:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-COL4A2-3	chr13:110439457-110442761	NONHSAT035120
2	lnc-COL4A2-3	chr13:110440328-110440912	NONHSAT035119
3	lnc-COL4A2-3	chr13:110433655-110433753	NONHSAT035119
4	lnc-COL4A2-3	chr13:110439709-110439792	NONHSAT035121

No data

Variant related genes	Relation type
IRS2	TF binding region
IRS2	CpG island
ENSG00000114473	chromatin interactions
ENSG00000187990	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000143977	chromatin interactions
ENSG00000201558	chromatin interactions
ENSG00000243477	chromatin interactions
ENSG00000150456	chromatin interactions
ENSG00000123358	chromatin interactions
ENSG00000136243	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000153234	chromatin interactions
ENSG00000185950	chromatin interactions
ENSG00000102804	chromatin interactions
ENSG00000168274	chromatin interactions
ENSG00000087095	chromatin interactions
ENSG00000228393	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000153487	chromatin interactions
ENSG00000186792	chromatin interactions
ENSG00000135945	chromatin interactions
ENSG00000255813	chromatin interactions
ENSG00000225727	chromatin interactions
ENSG00000157259	chromatin interactions
ENSG00000134905	chromatin interactions
ENSG00000245149	chromatin interactions
ENSG00000185621	chromatin interactions
ENSG00000167968	chromatin interactions
ENSG00000119820	chromatin interactions

Extended variants
information (count: 755 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:755 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs149795449	chr13:110425484-110425485	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs564279840	chr13:110425519-110425520	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs114942409	chr13:110425561-110425562	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs550626792	chr13:110425689-110425690	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
5	rs9559650	chr13:110425692-110425693	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs370046434	chr13:110425734-110425735	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
7	rs533017998	chr13:110425751-110425752	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
8	rs112982139	chr13:110425757-110425758	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
9	rs546669961	chr13:110425761-110425762	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
10	rs566574665	chr13:110425778-110425779	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
11	rs535399953	chr13:110425787-110425788	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
12	rs555416817	chr13:110425802-110425803	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
13	rs568742026	chr13:110425809-110425810	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
14	rs537719493	chr13:110425811-110425812	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
15	rs557404800	chr13:110425836-110425837	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
16	rs149448722	chr13:110425939-110425940	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
17	rs56920445	chr13:110425948-110425949	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs7999797	chr13:110426000-110426001	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs377107254	chr13:110426022-110426023	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
20	rs182976675	chr13:110426024-110426025	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs143865602	chr13:110426048-110426049	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
22	rs374739784	chr13:110426049-110426050	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs74930884	chr13:110426076-110426077	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
24	rs143268843	chr13:110426256-110426257	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
25	rs561722857	chr13:110426293-110426294	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
26	rs569450983	chr13:110426316-110426317	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
27	rs544484645	chr13:110426350-110426351	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs564269614	chr13:110426378-110426379	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs12876234	chr13:110426389-110426390	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs187308980	chr13:110426394-110426395	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
31	rs376557267	chr13:110426399-110426400	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
32	rs529020275	chr13:110426414-110426415	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs369918455	chr13:110426427-110426428	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
34	rs549127786	chr13:110426444-110426445	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
35	rs190362114	chr13:110426454-110426455	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
36	rs150207023	chr13:110426499-110426500	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
37	rs145822541	chr13:110426504-110426505	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
38	rs146255761	chr13:110426526-110426527	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
39	rs139259092	chr13:110426542-110426543	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
40	rs144150471	chr13:110426621-110426622	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
41	rs146508981	chr13:110426758-110426759	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
42	rs182607057	chr13:110426763-110426764	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
43	rs201363402	chr13:110426795-110426796	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
44	rs386774630	chr13:110426796-110426797	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
45	rs56123456	chr13:110426797-110426798	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs9555633	chr13:110426834-110426835	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs575229090	chr13:110426842-110426843	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs9521510	chr13:110426871-110426872	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs564364984	chr13:110426883-110426884	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs386774631	chr13:110426925-110426926	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
Gastric cancer	17908304	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Thyroid cancer	19087340	CNVD
abortions and stillbirths	19751515	CNVD
Acute myeloid leukemia	21251322	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Burkitt''s lymphoma	20823134	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Burkitt''s lymphoma	19759907	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Medulloblastoma	19270706	CNVD
Mental retardation	17124404	CNVD
Leukemia	18688285	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21858162	CNVD
Melanoma	17363583	CNVD
Developmental delay	21147756	CNVD
Breast cancer	21364760	CNVD
Colorectal cancer	21645411	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Breast cancer	16608533	CNVD
Glioblastoma multiforme	22286061	CNVD
Follicular lymphoma	20505157	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
abnormal development	18461090	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Malignant glioma	17146433	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Glioma	17123091	CNVD
Sudden cardiac death	19188705	CNVD
Breast cancer	20409316	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Neurocytoma	17123091	CNVD
Mantle cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD

Chromatin state (count:1794 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110397000-110428800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr13:110397200-110430400	Weak transcription	NHLF	lung
3	chr13:110401800-110430800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr13:110403200-110430600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr13:110406200-110429400	Weak transcription	Primary B cells from cord blood	blood
6	chr13:110408600-110430400	Weak transcription	Colonic Mucosa	Colon
7	chr13:110409000-110431200	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr13:110409400-110429800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr13:110409400-110430200	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr13:110413400-110430400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr13:110413600-110430800	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr13:110414400-110428800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr13:110415000-110428800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr13:110416000-110430800	Weak transcription	Fetal Kidney	kidney
15	chr13:110417000-110432400	Weak transcription	H1 Cell Line	embryonic stem cell
16	chr13:110417200-110430400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr13:110417200-110431600	Weak transcription	Fetal Muscle Leg	muscle
18	chr13:110417400-110425600	Weak transcription	NH-A	brain
19	chr13:110417400-110429400	Weak transcription	Small Intestine	intestine
20	chr13:110417400-110430200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr13:110417600-110430400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr13:110417600-110430400	Weak transcription	Thymus	Thymus
23	chr13:110417600-110430600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr13:110417800-110428800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
25	chr13:110417800-110428800	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr13:110417800-110429400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr13:110417800-110430200	Weak transcription	Fetal Thymus	thymus
28	chr13:110419200-110428000	Strong transcription	Monocytes-CD14+_RO01746	blood
29	chr13:110419600-110428600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
30	chr13:110419600-110429400	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr13:110419600-110429400	Weak transcription	Fetal Brain Male	brain
32	chr13:110419600-110429600	Weak transcription	Duodenum Smooth Muscle	Duodenum
33	chr13:110420000-110425800	Strong transcription	Muscle Satellite Cultured Cells	--
34	chr13:110420000-110429000	Weak transcription	Fetal Brain Female	brain
35	chr13:110420400-110429200	Weak transcription	Right Atrium	heart
36	chr13:110420800-110428000	Strong transcription	HSMM	muscle
37	chr13:110420800-110429000	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr13:110421400-110428800	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr13:110421600-110426200	Strong transcription	Primary neutrophils fromperipheralblood	blood
40	chr13:110422000-110427000	Strong transcription	Cortex derived primary cultured neurospheres	brain
41	chr13:110422000-110429000	Weak transcription	Skeletal Muscle Female	skeletal muscle
42	chr13:110423000-110433400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr13:110423200-110426600	Strong transcription	Liver	Liver
44	chr13:110423200-110428200	Weak transcription	Primary T cells fromperipheralblood	blood
45	chr13:110423200-110428800	Weak transcription	Rectal Smooth Muscle	rectum
46	chr13:110423200-110428800	Weak transcription	NHEK	skin
47	chr13:110423200-110430200	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr13:110423200-110430400	Weak transcription	NHDF-Ad	bronchial
49	chr13:110423200-110433200	Weak transcription	Gastric	stomach
50	chr13:110423400-110429400	Weak transcription	Sigmoid Colon	Sigmoid Colon

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