Variant report

Variant	nsv827064
Chromosome Location	chr1:228459934-228469437
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:278)
CpG islands
(count:1711)
Chromatin interactive
region (count:23)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:278 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr1:228463340-228463806	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr1:228463509-228463698	GM12878	blood:	n/a	n/a
3	BHLHE40	chr1:228464054-228464435	GM12878	blood:	n/a	n/a
4	BHLHE40	chr1:228463526-228464452	K562	blood:	n/a	n/a
5	BHLHE40	chr1:228462908-228463176	K562	blood:	n/a	n/a
6	CBX3	chr1:228462674-228463970	K562	blood:	n/a	n/a
7	CBX3	chr1:228464023-228464454	K562	blood:	n/a	n/a
8	CCNT2	chr1:228462955-228463732	K562	blood:	n/a	n/a
9	CCNT2	chr1:228464039-228464430	K562	blood:	n/a	n/a
10	CHD2	chr1:228463165-228464054	K562	blood:	n/a	chr1:228464013-228464023
11	CHD2	chr1:228463664-228463986	GM12878	blood:	n/a	n/a
12	CHD2	chr1:228463676-228464212	H1-hESC	embryonic stem cell:	n/a	chr1:228464013-228464023
13	CTBP2	chr1:228463507-228464410	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr1:228462216-228462318	NHEK	skin:	n/a	n/a
15	CTCF	chr1:228461640-228461790	K562	blood:	n/a	n/a
16	CTCF	chr1:228461560-228461710	HPF	lung:	n/a	n/a
17	CTCF	chr1:228462340-228462490	HCT-116	colon:	n/a	n/a
18	CTCF	chr1:228462280-228462430	HCT-116	colon:	n/a	n/a
19	CTCF	chr1:228461620-228461770	WERI-Rb-1	eye:	n/a	n/a
20	CTCF	chr1:228462261-228462315	MCF-7	breast:	n/a	n/a
21	CTCF	chr1:228463598-228463622	NHEK	skin:	n/a	n/a
22	CTCF	chr1:228461622-228461764	MCF-7	breast:	n/a	n/a
23	CTCF	chr1:228461460-228461610	K562	blood:	n/a	n/a
24	CTCF	chr1:228461580-228461730	HMF	breast:	n/a	n/a
25	CTCF	chr1:228461460-228461610	HRE	kidney:	n/a	n/a
26	CTCF	chr1:228462220-228462370	HRE	kidney:	n/a	n/a
27	CTCF	chr1:228461440-228461690	GM12867	blood:	n/a	n/a
28	CTCF	chr1:228462270-228462314	Hela-S3	cervix:	n/a	n/a
29	CTCF	chr1:228462960-228463110	NHEK	skin:	n/a	n/a
30	CTCF	chr1:228461520-228461670	HepG2	liver:	n/a	n/a
31	CTCF	chr1:228461620-228461770	HUVEC	blood vessel:	n/a	n/a
32	CTCF	chr1:228461624-228461748	A549	lung:	n/a	n/a
33	CTCF	chr1:228463460-228463610	HMEC	breast:	n/a	n/a
34	CTCF	chr1:228461509-228461747	K562	blood:	n/a	n/a
35	CTCF	chr1:228463560-228463710	AG09319	gingival:	n/a	n/a
36	CTCF	chr1:228461626-228461767	Hela-S3	cervix:	n/a	n/a
37	CTCF	chr1:228462220-228462370	NHEK	skin:	n/a	n/a
38	CTCF	chr1:228461660-228461810	HMEC	breast:	n/a	n/a
39	CTCF	chr1:228461600-228461750	A549	lung:	n/a	n/a
40	CTCF	chr1:228461675-228461703	LNCaP	prostate:	n/a	n/a
41	CTCF	chr1:228461480-228461630	MCF-7	breast:	n/a	n/a
42	CTCF	chr1:228461580-228461730	HEK293	kidney:	n/a	n/a
43	CTCF	chr1:228462178-228462369	IMR90	lung:	n/a	chr1:228462184-228462197 chr1:228462178-228462191
44	CTCF	chr1:228461621-228461628	GM12891	blood:	n/a	n/a
45	CTCF	chr1:228462081-228462395	K562	blood:	n/a	chr1:228462184-228462197 chr1:228462178-228462191
46	CTCF	chr1:228463644-228463801	Spleen_OC	spleen:	n/a	n/a
47	CTCF	chr1:228461500-228461650	SK-N-SH_RA	brain:	n/a	n/a
48	CTCF	chr1:228462260-228462410	HA-sp	spinal cord:	n/a	n/a
49	CTCF	chr1:228462127-228462354	K562	blood:	n/a	chr1:228462184-228462197 chr1:228462178-228462191
50	CTCF	chr1:228462860-228463010	HEK293	kidney:	n/a	n/a

(count:1711 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:228463260-228463310	HRE	kidney:	n/a
2	chr1:228466165-228466215	U87	brain:	n/a
3	chr1:228465440-228465490	H1-hESC	embryonic stem cell:	embryo
4	chr1:228463260-228463310	HRE	kidney:	n/a
5	chr1:228466165-228466215	U87	brain:	n/a
6	chr1:228465440-228465490	H1-hESC	embryonic stem cell:	embryo
7	chr1:228463260-228463310	GM06990	blood:	n/a
8	chr1:228466481-228466531	MCF10A-Er-Src	breast:	n/a
9	chr1:228463734-228463784	NHBE	bronchial:	n/a
10	chr1:228463720-228463770	Hepatocyte	liver:	n/a
11	chr1:228468399-228468449	BJ	skin:	n/a
12	chr1:228464137-228464187	MCF-7	breast:	n/a
13	chr1:228468624-228468674	Hepatocyte	liver:	n/a
14	chr1:228462316-228462366	SKMC	muscle:	n/a
15	chr1:228464394-228464444	GM06990	blood:	n/a
16	chr1:228463634-228463684	HRCEpiC	kidney:	n/a
17	chr1:228460630-228460680	HepG2	liver:	n/a
18	chr1:228465440-228465490	ProgFib	skin:	n/a
19	chr1:228466789-228466839	T-47D	breast:	n/a
20	chr1:228463634-228463684	ovcar-3	ovarian:	n/a
21	chr1:228462708-228462758	AG09309	skin:	n/a
22	chr1:228467995-228468045	GM12878	blood:	n/a
23	chr1:228465491-228465541	MCF-7	breast:	n/a
24	chr1:228461852-228461902	AoSMC	blood vessel:	n/a
25	chr1:228463734-228463784	HUVEC	blood vessel:	n/a
26	chr1:228465491-228465541	NB4	blood:	n/a
27	chr1:228467988-228468038	HCPEpiC	choroid plexus:	n/a
28	chr1:228460260-228460310	HPAEpiC	pulmonary alveolar:	n/a
29	chr1:228465440-228465490	NHDF-neo	bronchial:	n/a
30	chr1:228468624-228468674	MCF-7	breast:	n/a
31	chr1:228467995-228468045	HRCEpiC	kidney:	n/a
32	chr1:228463260-228463310	HEK293	kidney:	embryo
33	chr1:228463634-228463684	HCT-116	colon:	n/a
34	chr1:228462007-228462057	AG09319	gingival:	n/a
35	chr1:228468281-228468331	SK-N-SH_RA	brain:	n/a
36	chr1:228464137-228464187	SK-N-SH_RA	brain:	n/a
37	chr1:228466789-228466839	AG10803	skin:	n/a
38	chr1:228466971-228467021	T-47D	breast:	n/a
39	chr1:228466789-228466839	HL-60	blood:	n/a
40	chr1:228466523-228466573	GM06990	blood:	n/a
41	chr1:228466165-228466215	CMK	blood:	n/a
42	chr1:228463634-228463684	Hepatocyte	liver:	n/a
43	chr1:228464049-228464099	Hela-S3	cervix:	n/a
44	chr1:228463734-228463784	HNPCEpiC	eye:	n/a
45	chr1:228464137-228464187	HCF	heart:	n/a
46	chr1:228467995-228468045	SKMC	muscle:	n/a
47	chr1:228467995-228468045	AoSMC	blood vessel:	n/a
48	chr1:228468281-228468331	U87	brain:	n/a
49	chr1:228466523-228466573	HEK293	kidney:	embryo
50	chr1:228468281-228468331	HepG2	liver:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:228458946..228461751-chr1:228646279..228648631,2	K562	blood:
2	chr1:228459242..228461758-chr1:228551926..228553931,2	MCF-7	breast:
3	chr1:228463910..228466494-chr1:228485377..228488310,3	K562	blood:
4	chr1:228458711..228461742-chr1:228563280..228565996,3	MCF-7	breast:
5	chr1:228466929..228469506-chr1:228481575..228484301,2	MCF-7	breast:
6	chr1:228461911..228467066-chr1:228644125..228647181,7	K562	blood:
7	chr1:228461911..228467066-chr1:228644143..228647181,7	K562	blood:
8	chr1:228451031..228452706-chr1:228468801..228471254,2	K562	blood:
9	chr1:228463530..228464161-chr10:82218823..82219374,2	HCT-116	colon:
10	chr1:228458487..228461036-chr1:228462587..228464890,3	MCF-7	breast:
11	chr1:228351819..228355005-chr1:228461791..228464668,3	K562	blood:
12	chr1:228461884..228463852-chr1:228571777..228574496,2	MCF-7	breast:
13	chr1:228469235..228472192-chr1:228496971..228498907,2	K562	blood:
14	chr1:228459102..228461054-chr1:228509735..228512318,2	K562	blood:
15	chr1:228328463..228331528-chr1:228462308..228464210,3	K562	blood:
16	chr1:228353494..228355911-chr1:228462112..228465805,3	K562	blood:
17	chr1:228289703..228291795-chr1:228462279..228463838,2	K562	blood:
18	chr1:228401876..228404808-chr1:228460949..228463356,3	K562	blood:
19	chr1:228293306..228296150-chr1:228462712..228464969,2	K562	blood:
20	chr1:228326053..228331395-chr1:228462710..228467617,6	K562	blood:
21	chr1:228395695..228398626-chr1:228460759..228464017,3	K562	blood:
22	chr1:228399534..228402324-chr1:228461653..228463776,2	MCF-7	breast:
23	chr1:228452727..228456057-chr1:228457446..228460625,4	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C1orf145-4	chr1:228464906-228465347	predAs_chen_BX104687_1
2	lnc-C1orf145-3	chr1:228463400-228463747	ENSG00000269934.1
3	lnc-C1orf145-3	chr1:228462570-228462771	ENSG00000269934.1

No data

Variant related genes	Relation type
OBSCN	TF binding region
ENSG00000269890	TF binding region
ENSG00000269934	TF binding region
OBSCN	CpG island
ENSG00000269890	CpG island
ENSG00000269934	CpG island
ENSG00000181873	chromatin interactions
ENSG00000269934	chromatin interactions
ENSG00000270104	chromatin interactions
ENSG00000143793	chromatin interactions
ENSG00000154358	chromatin interactions
ENSG00000203684	chromatin interactions
ENSG00000162910	chromatin interactions
ENSG00000196890	chromatin interactions
ENSG00000181218	chromatin interactions
ENSG00000108219	chromatin interactions
ENSG00000143774	chromatin interactions
ENSG00000162913	chromatin interactions

Extended variants
information (count: 638 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:638 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558528501	chr1:228459958-228459959	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs182040685	chr1:228459966-228459967	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs541137550	chr1:228460009-228460010	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs554395907	chr1:228460011-228460012	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs184678505	chr1:228460040-228460041	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs543252699	chr1:228460042-228460043	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs563237654	chr1:228460060-228460061	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs576728107	chr1:228460095-228460096	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs545749918	chr1:228460099-228460100	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs368146751	chr1:228460104-228460105	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs559710281	chr1:228460109-228460110	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs569408673	chr1:228460117-228460118	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs395008	chr1:228460121-228460122	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs548643869	chr1:228460132-228460133	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs562077616	chr1:228460159-228460160	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs181616222	chr1:228460170-228460171	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs374430164	chr1:228460182-228460183	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs424645	chr1:228460217-228460218	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs571111097	chr1:228460274-228460275	Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs540148241	chr1:228460286-228460287	Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs186465083	chr1:228460299-228460300	Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs74142686	chr1:228460342-228460343	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs534355092	chr1:228460417-228460418	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs141295362	chr1:228460435-228460436	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs76880610	chr1:228460500-228460501	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs554004784	chr1:228460547-228460548	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs189709021	chr1:228460555-228460556	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs556745553	chr1:228460590-228460591	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs576689519	chr1:228460632-228460633	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs143631380	chr1:228460669-228460670	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs181225612	chr1:228460674-228460675	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs541899865	chr1:228460681-228460682	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs536035242	chr1:228460682-228460683	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs541734157	chr1:228460696-228460697	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs551156277	chr1:228460703-228460704	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs564685236	chr1:228460704-228460705	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs561950672	chr1:228460722-228460723	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs547256002	chr1:228460727-228460728	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs567092005	chr1:228460790-228460791	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs375537872	chr1:228460859-228460860	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs146788680	chr1:228460860-228460861	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs547878030	chr1:228460866-228460867	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs567772774	chr1:228460869-228460870	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs536763536	chr1:228460872-228460873	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs140432646	chr1:228460878-228460879	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs576604529	chr1:228460918-228460919	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs539291646	chr1:228460934-228460935	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs530687521	chr1:228460955-228460956	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs553226725	chr1:228460959-228460960	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs573104227	chr1:228460989-228460990	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Mental retardation	19951919	CNVD
Non-syndromic sensorineural hearing loss	17873649	CNVD
Basal cell lymphoma	17053054	CNVD
Autism	14699429	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Fumarase deficiency	21572526	CNVD
Autism	17483303	CNVD
Kartagener syndrome	16639409	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
Myelofibrosis	22110671	CNVD
abnormal development	18461090	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Lung adenocarcinoma	21935476	CNVD
Melanoma	17363583	CNVD

Chromatin state (count:688 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:228434800-228460000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:228434800-228462400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
3	chr1:228435200-228462800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr1:228435600-228462600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
5	chr1:228443600-228462800	Weak transcription	Fetal Kidney	kidney
6	chr1:228444000-228461400	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr1:228444200-228461600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr1:228444800-228462800	Weak transcription	Fetal Thymus	thymus
9	chr1:228445000-228462200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr1:228445000-228462400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr1:228445000-228462800	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr1:228445000-228463200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr1:228447600-228463000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr1:228447800-228460600	Weak transcription	Pancreas	Pancrea
15	chr1:228447800-228461200	Weak transcription	Gastric	stomach
16	chr1:228447800-228462800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr1:228447800-228463000	Weak transcription	Psoas Muscle	Psoas
18	chr1:228449000-228462600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr1:228449200-228462800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr1:228449800-228462600	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr1:228450000-228462800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr1:228450000-228462800	Weak transcription	Brain Anterior Caudate	brain
23	chr1:228450000-228463000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr1:228450200-228462000	Weak transcription	Fetal Lung	lung
25	chr1:228450600-228460200	Weak transcription	Fetal Brain Female	brain
26	chr1:228452400-228463000	Weak transcription	Primary hematopoietic stem cells	blood
27	chr1:228452800-228460000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr1:228453400-228462600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr1:228453600-228462400	Weak transcription	Colon Smooth Muscle	Colon
30	chr1:228453600-228462800	Weak transcription	Colonic Mucosa	Colon
31	chr1:228454200-228460400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr1:228454200-228462400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
33	chr1:228454200-228462600	Weak transcription	Adipose Nuclei	Adipose
34	chr1:228455400-228484800	Weak transcription	A549	lung
35	chr1:228455600-228462400	Weak transcription	Primary T helper cells fromperipheralblood	blood
36	chr1:228456000-228462600	Weak transcription	Duodenum Smooth Muscle	Duodenum
37	chr1:228456200-228462200	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr1:228456400-228485800	Weak transcription	Hela-S3	cervix
39	chr1:228456600-228461400	Weak transcription	Fetal Intestine Large	intestine
40	chr1:228456600-228463200	Weak transcription	Aorta	Aorta
41	chr1:228456800-228462600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
42	chr1:228456800-228462800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr1:228456800-228462800	Weak transcription	Brain Germinal Matrix	brain
44	chr1:228457000-228461200	Weak transcription	Ovary	ovary
45	chr1:228457200-228460600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr1:228457200-228460600	Weak transcription	Spleen	Spleen
47	chr1:228457200-228472000	Weak transcription	Fetal Heart	heart
48	chr1:228458000-228462800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr1:228458800-228462400	Strong transcription	Fetal Muscle Trunk	muscle
50	chr1:228458800-228462800	Genic enhancers	Skeletal Muscle Male	skeletal muscle

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