Variant report

Variant nsv827083
Chromosome Location chr14:105565013-105585277
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105561000-105567800 Weak transcription Placenta Amnion Placenta Amnion
2 chr14:105561200-105565400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr14:105562400-105565400 Weak transcription A549 lung
4 chr14:105564600-105568800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr14:105565000-105565200 Enhancers Esophagus oesophagus
6 chr14:105565000-105566000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr14:105565200-105566000 Weak transcription Esophagus oesophagus
8 chr14:105566000-105566200 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr14:105566000-105566400 ZNF genes & repeats Esophagus oesophagus
10 chr14:105566000-105566600 ZNF genes & repeats GM12878-XiMat blood
11 chr14:105566200-105566400 Weak transcription NHEK skin
12 chr14:105566200-105566600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr14:105566400-105566800 Weak transcription Esophagus oesophagus
14 chr14:105566600-105567400 Weak transcription GM12878-XiMat blood
15 chr14:105566600-105570000 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr14:105566800-105567200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr14:105566800-105567400 Enhancers Esophagus oesophagus
18 chr14:105567200-105567600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr14:105567400-105567800 Enhancers GM12878-XiMat blood
20 chr14:105567400-105568800 Weak transcription Esophagus oesophagus
21 chr14:105568400-105569800 Enhancers NHEK skin
22 chr14:105568600-105569200 Enhancers HMEC breast
23 chr14:105568800-105569000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
24 chr14:105568800-105569600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr14:105568800-105569600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr14:105568800-105569600 Enhancers Esophagus oesophagus
27 chr14:105569000-105569600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
28 chr14:105569000-105571400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr14:105569200-105569600 Bivalent Enhancer GM12878-XiMat blood
30 chr14:105569600-105570000 Enhancers GM12878-XiMat blood
31 chr14:105571600-105571800 Bivalent Enhancer Primary T cells from cord blood blood
32 chr14:105571600-105571800 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 31 rectum
33 chr14:105574000-105574200 Bivalent Enhancer Fetal Muscle Trunk muscle
34 chr14:105574000-105576800 Weak transcription Right Atrium heart
35 chr14:105574600-105575000 Enhancers A549 lung
36 chr14:105576200-105576400 Enhancers Esophagus oesophagus
37 chr14:105576400-105581200 Weak transcription Esophagus oesophagus
38 chr14:105578400-105578800 Active TSS HSMM muscle
39 chr14:105581000-105581800 Enhancers NHEK skin
40 chr14:105581200-105582200 Enhancers Esophagus oesophagus
41 chr14:105581400-105581800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr14:105581800-105584600 Weak transcription NHEK skin
43 chr14:105581800-105584800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr14:105582200-105584400 Weak transcription Esophagus oesophagus
45 chr14:105582400-105582600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
46 chr14:105583200-105588000 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr14:105584400-105585200 Enhancers Esophagus oesophagus
48 chr14:105584400-105586800 Enhancers HMEC breast
49 chr14:105584600-105585200 Enhancers Placenta Amnion Placenta Amnion
50 chr14:105584600-105585600 Enhancers NHEK skin

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