Variant report

Variant	nsv827268
Chromosome Location	chr15:29854614-29877444
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr15:29863413-29863698	H1-hESC	embryonic stem cell:	n/a	n/a
2	CHD1	chr15:29862452-29862734	H1-hESC	embryonic stem cell:	n/a	n/a
3	CHD1	chr15:29863333-29863897	H1-hESC	embryonic stem cell:	n/a	chr15:29863399-29863409
4	CHD2	chr15:29863366-29863659	H1-hESC	embryonic stem cell:	n/a	chr15:29863399-29863409
5	CREB1	chr15:29861919-29862235	H1-hESC	embryonic stem cell:	n/a	n/a
6	CREB1	chr15:29861838-29862236	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTCF	chr15:29859300-29859450	HEK293	kidney:	n/a	chr15:29859368-29859376
8	CTCF	chr15:29861160-29861310	BJ	skin:	n/a	chr15:29861205-29861223
9	CTCF	chr15:29861160-29861293	GM12878	blood:	n/a	chr15:29861205-29861223
10	CTCF	chr15:29861091-29861292	A549	lung:	n/a	chr15:29861205-29861223
11	CTCF	chr15:29861100-29861250	HPF	lung:	n/a	chr15:29861205-29861223
12	CTCF	chr15:29861160-29861310	HPAF	blood vessel:	n/a	chr15:29861205-29861223
13	CTCF	chr15:29865100-29865250	HRE	kidney:	n/a	n/a
14	CTCF	chr15:29862700-29862850	SK-N-SH_RA	brain:	n/a	n/a
15	CTCF	chr15:29861061-29861440	MCF-7	breast:	n/a	chr15:29861205-29861223
16	CTCF	chr15:29861131-29861288	HepG2	liver:	n/a	chr15:29861205-29861223
17	CTCF	chr15:29861133-29861251	SK-N-SH_RA	brain:	n/a	chr15:29861205-29861223
18	CTCF	chr15:29862700-29862850	AG04449	skin:	n/a	n/a
19	CTCF	chr15:29860700-29860850	A549	lung:	n/a	n/a
20	CTCF	chr15:29859300-29859450	HCT-116	colon:	n/a	chr15:29859368-29859376
21	CTCF	chr15:29861093-29861320	A549	lung:	n/a	chr15:29861205-29861223
22	CTCF	chr15:29862719-29862858	A549	lung:	n/a	n/a
23	CTCF	chr15:29862707-29862829	Gliobla	brain:	n/a	n/a
24	CTCF	chr15:29861160-29861310	HMEC	breast:	n/a	chr15:29861205-29861223
25	CTCF	chr15:29861150-29861266	HUVEC	blood vessel:	n/a	chr15:29861205-29861223
26	CTCF	chr15:29855793-29855901	GM10248	blood:	n/a	n/a
27	CTCF	chr15:29861098-29861335	Gliobla	brain:	n/a	chr15:29861205-29861223
28	CTCF	chr15:29859220-29859370	HRE	kidney:	n/a	n/a
29	CTCF	chr15:29865100-29865250	A549	lung:	n/a	n/a
30	CTCF	chr15:29863367-29863475	H1-hESC	embryonic stem cell:	n/a	n/a
31	CTCF	chr15:29863392-29863436	LNCaP	prostate:	n/a	n/a
32	CTCF	chr15:29861120-29861270	HBMEC	blood vessel:	n/a	chr15:29861205-29861223
33	CTCF	chr15:29861180-29861330	HCT-116	colon:	n/a	chr15:29861205-29861223
34	CTCF	chr15:29861180-29861330	SAEC	small airway:	n/a	chr15:29861205-29861223
35	CTCF	chr15:29861220-29861370	RPTEC	kidney:	n/a	n/a
36	CTCF	chr15:29860913-29861553	SK-N-SH	brain:	n/a	chr15:29861205-29861223
37	CTCF	chr15:29862645-29862668	LNCaP	prostate:	n/a	n/a
38	CTCF	chr15:29861100-29861250	HRE	kidney:	n/a	chr15:29861205-29861223
39	CTCF	chr15:29861140-29861290	AG09309	skin:	n/a	chr15:29861205-29861223
40	CTCF	chr15:29861121-29861255	Medullo	brain:	n/a	chr15:29861205-29861223
41	CTCF	chr15:29861120-29861270	A549	lung:	n/a	chr15:29861205-29861223
42	CTCF	chr15:29861119-29861312	SK-N-SH_RA	brain:	n/a	chr15:29861205-29861223
43	CTCF	chr15:29861140-29861290	RPTEC	kidney:	n/a	chr15:29861205-29861223
44	CTCF	chr15:29861160-29861310	HCT-116	colon:	n/a	chr15:29861205-29861223
45	CTCF	chr15:29861104-29861291	H1-hESC	embryonic stem cell:	n/a	chr15:29861205-29861223
46	CTCF	chr15:29865857-29865889	Fibrobl	skin:	n/a	n/a
47	CTCF	chr15:29861140-29861290	HCFaa	heart:	n/a	chr15:29861205-29861223
48	CTCF	chr15:29861083-29861328	Spleen_OC	spleen:	n/a	chr15:29861205-29861223
49	CTCF	chr15:29861140-29861290	NHEK	skin:	n/a	chr15:29861205-29861223
50	CTCF	chr15:29861137-29861292	Hela-S3	cervix:	n/a	chr15:29861205-29861223

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:29862036-29862086	Caco-2	colon:	n/a
2	chr15:29862036-29862086	Caco-2	colon:	n/a
3	chr15:29864140-29864190	PANC-1	pancreas:	n/a
4	chr15:29863570-29863620	HIPEpiC	eye:	n/a
5	chr15:29862036-29862086	AG10803	skin:	n/a
6	chr15:29862517-29862567	HNPCEpiC	eye:	n/a
7	chr15:29861165-29861215	HCPEpiC	choroid plexus:	n/a
8	chr15:29864169-29864219	CMK	blood:	n/a
9	chr15:29863572-29863622	K562	blood:	n/a
10	chr15:29863572-29863622	SK-N-SH_RA	brain:	n/a
11	chr15:29864140-29864190	AG04449	skin:	fetal
12	chr15:29864140-29864190	ProgFib	skin:	n/a
13	chr15:29863964-29864014	NB4	blood:	n/a
14	chr15:29862568-29862618	SK-N-SH_RA	brain:	n/a
15	chr15:29862568-29862618	AG09319	gingival:	n/a
16	chr15:29863648-29863698	HRE	kidney:	n/a
17	chr15:29863648-29863698	AG09319	gingival:	n/a
18	chr15:29862517-29862567	PrEC	prostate:	n/a
19	chr15:29861165-29861215	T-47D	breast:	n/a
20	chr15:29862517-29862567	ECC-1	luminal epithelium:	n/a
21	chr15:29864140-29864190	SKMC	muscle:	n/a
22	chr15:29862568-29862618	Jurkat	blood:	n/a
23	chr15:29861165-29861215	SK-N-SH_RA	brain:	n/a
24	chr15:29866755-29866805	AG04450	lung:	fetal
25	chr15:29863572-29863622	NT2-D1	testis:	n/a
26	chr15:29863572-29863622	IMR90	lung:	fetal
27	chr15:29864140-29864190	HNPCEpiC	eye:	n/a
28	chr15:29863572-29863622	T-47D	breast:	n/a
29	chr15:29862517-29862567	NHDF-neo	bronchial:	n/a
30	chr15:29862568-29862618	NH-A	brain:	n/a
31	chr15:29862517-29862567	PFSK-1	brain:	n/a
32	chr15:29859427-29859477	H1-hESC	embryonic stem cell:	embryo
33	chr15:29863648-29863698	GM06990	blood:	n/a
34	chr15:29863570-29863620	BJ	skin:	n/a
35	chr15:29863648-29863698	NHBE	bronchial:	n/a
36	chr15:29866755-29866805	A549	lung:	n/a
37	chr15:29861165-29861215	ovcar-3	ovarian:	n/a
38	chr15:29863648-29863698	BJ	skin:	n/a
39	chr15:29863572-29863622	HRCEpiC	kidney:	n/a
40	chr15:29859427-29859477	HRPEpiC	eye:	n/a
41	chr15:29863964-29864014	T-47D	breast:	n/a
42	chr15:29866755-29866805	IMR90	lung:	fetal
43	chr15:29861165-29861215	HEEpiC	esophagus:	n/a
44	chr15:29866755-29866805	AG09309	skin:	n/a
45	chr15:29861165-29861215	NHDF-neo	bronchial:	n/a
46	chr15:29862568-29862618	ovcar-3	ovarian:	n/a
47	chr15:29862568-29862618	AoSMC	blood vessel:	n/a
48	chr15:29864169-29864219	HAEpiC	amniotic membrane:	n/a
49	chr15:29864140-29864190	Hela-S3	cervix:	n/a
50	chr15:29863648-29863698	LNCaP	prostate:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:29743489..29744057-chr15:29860766..29861643,3	MCF-7	breast:
2	chr15:29743174..29744066-chr15:29860740..29861596,5	MCF-7	breast:
3	chr15:29853639..29856310-chr15:29888164..29890119,2	K562	blood:

Variant related genes	Relation type
FAM189A1	TF binding region
FAM189A1	CpG island

Extended variants
information (count: 588 )
Associated
traits (count: 160 )

Variant overlapped rSNPs/rCNVs (count:588 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186667412	chr15:29854628-29854629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs190294304	chr15:29854733-29854734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs12439614	chr15:29854737-29854738	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs560677955	chr15:29854849-29854850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs546981215	chr15:29854893-29854894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs564843075	chr15:29854967-29854968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs566893438	chr15:29854989-29854990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs372799544	chr15:29854991-29854992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs72526844	chr15:29854992-29854993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs61659647	chr15:29854996-29854997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs375576713	chr15:29854997-29854998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs112501389	chr15:29855027-29855028	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs549660909	chr15:29855028-29855029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs569492429	chr15:29855047-29855048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs369715627	chr15:29855049-29855050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs377760754	chr15:29855075-29855076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs538431395	chr15:29855091-29855092	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs557960349	chr15:29855124-29855125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs577305870	chr15:29855145-29855146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs12916810	chr15:29855161-29855162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs8042563	chr15:29855185-29855186	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs553325647	chr15:29855242-29855243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs370295765	chr15:29855254-29855255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12909208	chr15:29855261-29855262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs2337125	chr15:29855301-29855302	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs536482778	chr15:29855311-29855312	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs569470913	chr15:29855347-29855348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs374556518	chr15:29855359-29855360	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs149217165	chr15:29855365-29855366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs536951041	chr15:29855369-29855370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs2337124	chr15:29855411-29855412	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs565091416	chr15:29855420-29855421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs72713725	chr15:29855433-29855434	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs547117969	chr15:29855452-29855453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs560248474	chr15:29855481-29855482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529280781	chr15:29855489-29855490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs143258792	chr15:29855509-29855510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs202209990	chr15:29855548-29855549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs569512928	chr15:29855576-29855577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs538183826	chr15:29855678-29855679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs182495443	chr15:29855689-29855690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs571530556	chr15:29855707-29855708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs373929042	chr15:29855724-29855725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs533598386	chr15:29855772-29855773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs1459360	chr15:29855802-29855803	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs187666406	chr15:29855828-29855829	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs527563423	chr15:29855947-29855948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs141482650	chr15:29855956-29855957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs555918739	chr15:29856002-29856003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs112705744	chr15:29856017-29856018	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:160)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
idiopathic generalized epilepsy	19843651	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prader-willi syndrome	21504564	CNVD
The inv dup or idic syndrome	19019226	CNVD
Prader-willi syndrome	21233802	CNVD
Angelman syndrome	16617304	CNVD
Angelman syndrome	20970697	CNVD
Autism	22958593	CNVD
Prader-willi syndrome	16617304	CNVD
Prader-willi syndrome	18923514	CNVD
Prader-willi syndrome	20970697	CNVD
Angelman syndrome	16183798	CNVD
Angelman syndrome	18923514	CNVD
Prader-willi syndrome	22241247	CNVD
Epilepsy	20970697	CNVD
Autism	20970697	CNVD
Autism	19935738	CNVD
Autism	22930557	CNVD
Autism	19966786	CNVD
Autism	18923514	CNVD
Autism	18925931	CNVD
Autism	18835857	CNVD
Prader-willi syndrome	18835857	CNVD
Prader-willi syndrome	22152151	CNVD
Autism	22241247	CNVD
15q-syndrome	21725066	CNVD
Prader-willi syndrome	21503198	CNVD
Autism	21956041	CNVD
Prader-willi syndrome	16760730	CNVD
Prader-willi syndrome	22470819	CNVD
prenatal diagnosis	20453657	CNVD
Prader-willi syndrome	17867985	CNVD
Angelman syndrome	21072004	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Prader-willi syndrome	18781185	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Schizophrenia	19197363	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Angelman syndrome	18787571	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Abnormal corpus callosum	21572526	CNVD
Autism	20531469	CNVD
Neuropsychiatric disorder	20506139	CNVD
Austim spectrum disorder	21302340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Mental retardation	17124404	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Autism	19843651	CNVD
Schizophrenia	19843651	CNVD
Schizophrenia	23813976	CNVD
Cognitive impairment	21505072	CNVD
Epilepsy	20502679	CNVD
Autism	22543975	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495309	CNVD
Schizophrenia	20388499	CNVD
Autism	20841430	CNVD
Epilepsy	22499536	CNVD
Schizophrenia	22499536	CNVD
Schizophrenia	18923514	CNVD
Bipolar disorder	19114987	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	22958593	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	21956041	CNVD
Schizophrenia	20970697	CNVD
Mental retardation	19951919	CNVD
Mental retardation	21956041	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Autism	21269290	CNVD
Intellectual disability	21269290	CNVD
Schizophrenia	21269290	CNVD
Colorectal cancer	21128281	CNVD
Epilepsy	19289393	CNVD
Epilepsy	20643615	CNVD
Mental retardation	19289393	CNVD
Mental retardation	20152051	CNVD
Schizophrenia	19289393	CNVD
dysmorphic features	19289393	CNVD
idiopathic epilepsies	19341504	CNVD
idiopathic generalized epilepsy	19592580	CNVD
idiopathic generalized epilepsy	19136953	CNVD
Autism	22094647	CNVD
Developmental delay	19898479	CNVD
Mental retardation	18278044	CNVD
Mental retardation	19898479	CNVD
Prader-willi syndrome	18854863	CNVD
Schizophrenia	19855392	CNVD
Ovarian cancer	22174824	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
early-passage human iPS cells	21368824	CNVD
Cancer	20164919	CNVD

Chromatin state (count:392 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:29848000-29859200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr15:29848200-29861200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr15:29850000-29862000	Weak transcription	Pancreas	Pancrea
4	chr15:29855000-29859200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr15:29858400-29861000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr15:29859000-29860000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr15:29859200-29859400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr15:29859200-29859400	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr15:29859200-29859400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr15:29859200-29859400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr15:29859200-29859800	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr15:29859400-29859600	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr15:29859400-29859800	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr15:29859400-29859800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr15:29859600-29859800	Enhancers	H1 Cell Line	embryonic stem cell
16	chr15:29859800-29860000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr15:29859800-29860800	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr15:29860000-29861000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr15:29860000-29862000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr15:29860600-29860800	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
21	chr15:29860800-29861200	Enhancers	H1 Cell Line	embryonic stem cell
22	chr15:29860800-29861200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
23	chr15:29860800-29861200	Enhancers	Duodenum Mucosa	Duodenum
24	chr15:29860800-29861200	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
25	chr15:29861000-29861200	Enhancers	ES-I3 Cell Line	embryonic stem cell
26	chr15:29861000-29861400	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
27	chr15:29861000-29861400	Enhancers	Brain Cingulate Gyrus	brain
28	chr15:29861000-29861400	Bivalent Enhancer	Fetal Heart	heart
29	chr15:29861000-29861400	Enhancers	Stomach Mucosa	stomach
30	chr15:29861000-29861600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
31	chr15:29861000-29862000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr15:29861000-29862000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr15:29861200-29861400	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
34	chr15:29861200-29861400	Enhancers	H9 Cell Line	embryonic stem cell
35	chr15:29861200-29861400	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
36	chr15:29861200-29861400	Bivalent Enhancer	Brain Hippocampus Middle	brain
37	chr15:29861200-29861400	Flanking Active TSS	Duodenum Mucosa	Duodenum
38	chr15:29861200-29861400	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 31	rectum
39	chr15:29861200-29861600	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
40	chr15:29861200-29861600	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
41	chr15:29861200-29861600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr15:29861200-29861800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
43	chr15:29861200-29861800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr15:29861200-29861800	Bivalent Enhancer	Fetal Brain Male	brain
45	chr15:29861200-29862000	Bivalent Enhancer	Fetal Kidney	kidney
46	chr15:29861200-29862000	Bivalent Enhancer	Fetal Lung	lung
47	chr15:29861200-29862400	Bivalent Enhancer	Adipose Nuclei	Adipose
48	chr15:29861200-29862400	Active TSS	Stomach Smooth Muscle	stomach
49	chr15:29861200-29863400	Active TSS	Rectal Smooth Muscle	rectum
50	chr15:29861400-29861600	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links