Variant report

Variant	nsv827278
Chromosome Location	chr15:30937997-31090300
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1236)
CpG islands
(count:183)
Chromatin interactive
region (count:4)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1236 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:30941065-30941323	HepG2	liver:	n/a	chr15:30941184-30941200 chr15:30941198-30941214
2	ARID3A	chr15:31058643-31058927	HepG2	liver:	n/a	n/a
3	ATF1	chr15:30942408-30942747	K562	blood:	n/a	n/a
4	ATF2	chr15:30941959-30942874	GM12878	blood:	n/a	n/a
5	BACH1	chr15:31056549-31056561	K562	blood:	n/a	n/a
6	BATF	chr15:30939417-30939718	GM12878	blood:	n/a	n/a
7	BATF	chr15:30988651-30989902	GM12878	blood:	n/a	n/a
8	BATF	chr15:30942098-30942760	GM12878	blood:	n/a	n/a
9	BATF	chr15:30942101-30942823	GM12878	blood:	n/a	n/a
10	BATF	chr15:30939410-30939698	GM12878	blood:	n/a	n/a
11	BATF	chr15:30988887-30989837	GM12878	blood:	n/a	n/a
12	BATF	chr15:31047306-31047532	GM12878	blood:	n/a	n/a
13	BATF	chr15:31001037-31001298	GM12878	blood:	n/a	chr15:31001194-31001205
14	BATF	chr15:31078925-31079140	GM12878	blood:	n/a	n/a
15	BCL11A	chr15:31047283-31047543	GM12878	blood:	n/a	n/a
16	BCL11A	chr15:30942112-30942840	GM12878	blood:	n/a	n/a
17	BCL11A	chr15:30988850-30989149	GM12878	blood:	n/a	n/a
18	BCL11A	chr15:30989215-30989908	GM12878	blood:	n/a	n/a
19	BCL11A	chr15:30988374-30988675	GM12878	blood:	n/a	n/a
20	BCL11A	chr15:30988813-30989894	GM12878	blood:	n/a	n/a
21	BCLAF1	chr15:30942082-30942772	GM12878	blood:	n/a	n/a
22	BHLHE40	chr15:30959588-30959606	K562	blood:	n/a	n/a
23	BHLHE40	chr15:30968872-30968884	K562	blood:	n/a	n/a
24	BHLHE40	chr15:30989526-30989883	GM12878	blood:	n/a	n/a
25	BHLHE40	chr15:30941983-30942693	GM12878	blood:	n/a	n/a
26	CEBPB	chr15:30964859-30965084	K562	blood:	n/a	n/a
27	CEBPB	chr15:30953404-30953637	K562	blood:	n/a	chr15:30953517-30953528
28	CEBPB	chr15:31058573-31058941	H1-hESC	embryonic stem cell:	n/a	chr15:31058745-31058756
29	CEBPB	chr15:30983881-30984093	HepG2	liver:	n/a	n/a
30	CEBPB	chr15:30953401-30953667	IMR90	lung:	n/a	chr15:30953517-30953528
31	CEBPB	chr15:30983791-30984131	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr15:30983768-30983986	A549	lung:	n/a	n/a
33	CEBPB	chr15:30965736-30965777	A549	lung:	n/a	n/a
34	CEBPB	chr15:30967400-30967648	A549	lung:	n/a	chr15:30967474-30967485
35	CEBPB	chr15:30958201-30958546	IMR90	lung:	n/a	n/a
36	CEBPB	chr15:31035071-31035332	IMR90	lung:	n/a	n/a
37	CEBPB	chr15:30953435-30953668	A549	lung:	n/a	chr15:30953517-30953528
38	CEBPB	chr15:31058558-31059008	IMR90	lung:	n/a	chr15:31058745-31058756
39	CEBPB	chr15:31058670-31058834	K562	blood:	n/a	chr15:31058745-31058756
40	CEBPB	chr15:31058652-31058827	HepG2	liver:	n/a	chr15:31058745-31058756
41	CEBPB	chr15:31058568-31058944	HepG2	liver:	n/a	chr15:31058745-31058756
42	CEBPB	chr15:30967341-30967670	A549	lung:	n/a	chr15:30967474-30967485
43	CEBPB	chr15:30967306-30967676	IMR90	lung:	n/a	chr15:30967474-30967485
44	CEBPB	chr15:30983782-30984067	IMR90	lung:	n/a	n/a
45	CEBPB	chr15:31058594-31058887	HepG2	liver:	n/a	chr15:31058745-31058756
46	CEBPB	chr15:31058570-31058941	A549	lung:	n/a	chr15:31058745-31058756
47	CEBPB	chr15:30953382-30953692	K562	blood:	n/a	chr15:30953517-30953528
48	CEBPB	chr15:30983872-30983981	K562	blood:	n/a	n/a
49	CEBPB	chr15:30983742-30983960	H1-hESC	embryonic stem cell:	n/a	n/a
50	CEBPB	chr15:30967357-30967622	Hela-S3	cervix:	n/a	chr15:30967474-30967485

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:31086755-31086805	HIPEpiC	eye:	n/a
2	chr15:31088666-31088716	HIPEpiC	eye:	n/a
3	chr15:31066090-31066140	GM12891	blood:	n/a
4	chr15:31088666-31088716	AG04449	skin:	fetal
5	chr15:31066090-31066140	GM12878	blood:	n/a
6	chr15:31088666-31088716	Jurkat	blood:	n/a
7	chr15:31088666-31088716	Caco-2	colon:	n/a
8	chr15:31066090-31066140	HepG2	liver:	n/a
9	chr15:31066090-31066140	K562	blood:	n/a
10	chr15:31086755-31086805	GM06990	blood:	n/a
11	chr15:31088666-31088716	Hepatocyte	liver:	n/a
12	chr15:31066090-31066140	Hepatocyte	liver:	n/a
13	chr15:31086755-31086805	NT2-D1	testis:	n/a
14	chr15:31088666-31088716	HL-60	blood:	n/a
15	chr15:31066090-31066140	BE2_C	brain:	n/a
16	chr15:31066090-31066140	HCT-116	colon:	n/a
17	chr15:31086755-31086805	HRCEpiC	kidney:	n/a
18	chr15:31066090-31066140	HPAEpiC	pulmonary alveolar:	n/a
19	chr15:31086755-31086805	Hepatocyte	liver:	n/a
20	chr15:31088666-31088716	ECC-1	luminal epithelium:	n/a
21	chr15:31066090-31066140	HCPEpiC	choroid plexus:	n/a
22	chr15:31088666-31088716	AoSMC	blood vessel:	n/a
23	chr15:31066090-31066140	HCM	heart:	n/a
24	chr15:31088666-31088716	BJ	skin:	n/a
25	chr15:31088666-31088716	SKMC	muscle:	n/a
26	chr15:31086755-31086805	K562	blood:	n/a
27	chr15:31088666-31088716	SK-N-SH_RA	brain:	n/a
28	chr15:31088666-31088716	U87	brain:	n/a
29	chr15:31066090-31066140	HRCEpiC	kidney:	n/a
30	chr15:31066090-31066140	HIPEpiC	eye:	n/a
31	chr15:31066090-31066140	GM06990	blood:	n/a
32	chr15:31066090-31066140	HL-60	blood:	n/a
33	chr15:31066090-31066140	PFSK-1	brain:	n/a
34	chr15:31066090-31066140	GM19239	blood:	n/a
35	chr15:31066090-31066140	SK-N-SH_RA	brain:	n/a
36	chr15:31086755-31086805	PrEC	prostate:	n/a
37	chr15:31086755-31086805	HCT-116	colon:	n/a
38	chr15:31086755-31086805	MCF10A-Er-Src	breast:	n/a
39	chr15:31086755-31086805	AG09319	gingival:	n/a
40	chr15:31086755-31086805	SK-N-MC	brain:	n/a
41	chr15:31088666-31088716	CMK	blood:	n/a
42	chr15:31066090-31066140	HNPCEpiC	eye:	n/a
43	chr15:31086755-31086805	GM12892	blood:	n/a
44	chr15:31066090-31066140	A549	lung:	n/a
45	chr15:31086755-31086805	HRE	kidney:	n/a
46	chr15:31088666-31088716	SK-N-MC	brain:	n/a
47	chr15:31086755-31086805	SK-N-SH_RA	brain:	n/a
48	chr15:31066090-31066140	MCF10A-Er-Src	breast:	n/a
49	chr15:31066090-31066140	AG10803	skin:	n/a
50	chr15:31088666-31088716	GM12891	blood:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:30957691..30960365-chr15:30968745..30971745,3	K562	blood:
2	chr15:30957691..30960365-chr15:30969306..30971745,2	K562	blood:
3	chr15:30957691..30960365-chr15:30968745..30971745,3	K562	blood:
4	chr15:30957691..30960365-chr15:30969306..30971745,2	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARHGAP11B-1	chr15:31061535-31065196	NONHSAT041388
2	lnc-ARHGAP11B-1	chr15:31042605-31042759	NONHSAT041384
3	lnc-GOLGA8H-2	chr15:30941000-30941732	ENSG00000269974.1
4	lnc-ARHGAP11B-1	chr15:31015549-31015698	NONHSAT041382
5	lnc-ARHGAP11B-1	chr15:31008423-31008545	NONHSAT041382
6	lnc-ARHGAP11B-1	chr15:30939871-30939917	NONHSAT041382
7	lnc-ARHGAP11B-1	chr15:31060916-31061371	NONHSAT041387
8	lnc-ARHGAP11B-1	chr15:31060061-31065209	NONHSAT041384
9	lnc-ARHGAP11B-3	chr15:31074599-31075123	NONHSAT041397
10	lnc-ARHGAP11B-1	chr15:30950920-30951047	NONHSAT041384
11	lnc-ARHGAP11B-1	chr15:30938335-30938498	NONHSAT041382
12	lnc-ARHGAP11B-1	chr15:31008423-31008545	NONHSAT041384

No data

Variant related genes	Relation type
GOLGA8UP	TF binding region
ARHGAP11B	TF binding region
ENSG00000269974	TF binding region
ENSG00000206846	TF binding region
ENSG00000221379	TF binding region
RN7SL82P	TF binding region
GOLGA8UP	CpG island
ARHGAP11B	CpG island
ENSG00000269974	CpG island
ENSG00000206846	CpG island
ENSG00000221379	CpG island
RN7SL82P	CpG island

Extended variants
information (count: 5776 )
Associated
traits (count: 139 )

Variant overlapped rSNPs/rCNVs (count:5776 , 50 per page) page: 1 2 3 4 5 6 7 ... 116

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs568659829	chr15:30938102-30938103	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs530991653	chr15:30938152-30938153	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
3	rs550294869	chr15:30938193-30938194	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
4	rs570202590	chr15:30938203-30938204	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
5	rs549315628	chr15:30938233-30938234	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
6	rs539092564	chr15:30938236-30938237	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
7	rs200685039	chr15:30938246-30938247	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
8	rs375643311	chr15:30938247-30938248	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
9	rs552550406	chr15:30938252-30938253	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
10	rs76497592	chr15:30938265-30938266	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
11	rs566302325	chr15:30938288-30938289	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
12	rs142440152	chr15:30938294-30938295	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
13	rs112615235	chr15:30938316-30938317	Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
14	rs140434540	chr15:30938342-30938343	Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
15	rs145727418	chr15:30938384-30938385	Weak transcription Strong transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs530239323	chr15:30938424-30938425	Weak transcription Strong transcription Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
17	rs140366222	chr15:30938459-30938460	Weak transcription Strong transcription Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
18	rs145453249	chr15:30938483-30938484	Weak transcription Strong transcription Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
19	rs557538768	chr15:30938495-30938496	Weak transcription Strong transcription Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
20	rs113759844	chr15:30938533-30938534	Weak transcription Strong transcription Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs182888695	chr15:30938592-30938593	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs149540185	chr15:30938619-30938620	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs74011052	chr15:30938622-30938623	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs376533766	chr15:30938634-30938635	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs542539321	chr15:30938645-30938646	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs562228613	chr15:30938674-30938675	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs531175130	chr15:30938690-30938691	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs550759231	chr15:30938743-30938744	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs193052337	chr15:30938748-30938749	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs532871050	chr15:30938750-30938751	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs570120660	chr15:30938751-30938752	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs546251446	chr15:30938761-30938762	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs566483266	chr15:30938776-30938777	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs116785404	chr15:30938790-30938791	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs549301173	chr15:30938796-30938797	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs569056978	chr15:30938844-30938845	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs538094175	chr15:30938847-30938848	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs112987052	chr15:30938859-30938860	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs76657467	chr15:30938863-30938864	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs74960509	chr15:30938877-30938878	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs149974483	chr15:30938878-30938879	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs552736433	chr15:30938899-30938900	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs182926235	chr15:30938912-30938913	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs539961391	chr15:30938937-30938938	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs553170959	chr15:30938959-30938960	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs187552626	chr15:30938974-30938975	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs192972379	chr15:30939028-30939029	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs112084240	chr15:30939058-30939059	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
49	rs148203289	chr15:30939067-30939068	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs575535691	chr15:30939127-30939128	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:139)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prader-willi syndrome	21504564	CNVD
The inv dup or idic syndrome	19019226	CNVD
Prader-willi syndrome	21233802	CNVD
Angelman syndrome	16617304	CNVD
Angelman syndrome	20970697	CNVD
Autism	22958593	CNVD
Prader-willi syndrome	16617304	CNVD
Prader-willi syndrome	18923514	CNVD
Prader-willi syndrome	20970697	CNVD
Angelman syndrome	16183798	CNVD
Angelman syndrome	18923514	CNVD
Prader-willi syndrome	22241247	CNVD
Epilepsy	20970697	CNVD
Autism	20970697	CNVD
Autism	19935738	CNVD
Autism	22930557	CNVD
Autism	19966786	CNVD
Autism	18923514	CNVD
Autism	18925931	CNVD
Autism	18835857	CNVD
Prader-willi syndrome	18835857	CNVD
Prader-willi syndrome	22152151	CNVD
Autism	22241247	CNVD
15q-syndrome	21725066	CNVD
Prader-willi syndrome	21503198	CNVD
Autism	21956041	CNVD
Prader-willi syndrome	16760730	CNVD
Prader-willi syndrome	22470819	CNVD
prenatal diagnosis	20453657	CNVD
Prader-willi syndrome	17867985	CNVD
Angelman syndrome	21072004	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Prader-willi syndrome	18781185	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Angelman syndrome	18787571	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Abnormal corpus callosum	21572526	CNVD
Neuropsychiatric disorder	20506139	CNVD
Austim spectrum disorder	21302340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Epilepsy	22499536	CNVD
Schizophrenia	22499536	CNVD
Schizophrenia	18923514	CNVD
Bipolar disorder	19114987	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	22958593	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	21956041	CNVD
Schizophrenia	20970697	CNVD
Mental retardation	19951919	CNVD
Mental retardation	21956041	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Autism	21269290	CNVD
Intellectual disability	21269290	CNVD
Schizophrenia	21269290	CNVD
Colorectal cancer	21128281	CNVD
Epilepsy	19289393	CNVD
Epilepsy	20643615	CNVD
Mental retardation	19289393	CNVD
Mental retardation	20152051	CNVD
Schizophrenia	19289393	CNVD
dysmorphic features	19289393	CNVD
idiopathic epilepsies	19341504	CNVD
idiopathic generalized epilepsy	19592580	CNVD
idiopathic generalized epilepsy	19136953	CNVD
Autism	22094647	CNVD
Developmental delay	19898479	CNVD
Mental retardation	18278044	CNVD
Mental retardation	19898479	CNVD
Prader-willi syndrome	18854863	CNVD
Schizophrenia	19855392	CNVD
Ovarian cancer	22174824	CNVD
Epilepsy	20502679	CNVD
small cell lung cancer	20016488	CNVD
Intellectual disability	21811512	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD

Chromatin state (count:1156 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:30919200-30942400	Weak transcription	Primary T cells from cord blood	blood
2	chr15:30919200-30966400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr15:30919400-30938400	Weak transcription	Fetal Muscle Trunk	muscle
4	chr15:30919400-30959800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr15:30919400-30969800	Weak transcription	Fetal Lung	lung
6	chr15:30919400-30972800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr15:30919600-30939200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:30919600-30948200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr15:30919600-30964000	Weak transcription	Fetal Intestine Large	intestine
10	chr15:30919600-31023200	Weak transcription	Fetal Intestine Small	intestine
11	chr15:30919800-30940400	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr15:30919800-30942200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr15:30919800-30961800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr15:30920000-30938000	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr15:30920000-30938800	Weak transcription	Thymus	Thymus
16	chr15:30920000-30939200	Weak transcription	Fetal Muscle Leg	muscle
17	chr15:30920000-30939800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr15:30920000-30940600	Weak transcription	Primary hematopoietic stem cells	blood
19	chr15:30920000-30955400	Weak transcription	NH-A	brain
20	chr15:30920000-31028200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr15:30920800-30940400	Weak transcription	HSMM	muscle
22	chr15:30920800-30950400	Weak transcription	NHEK	skin
23	chr15:30921200-30938000	Weak transcription	NHDF-Ad	bronchial
24	chr15:30921200-30982400	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr15:30922200-30938600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr15:30922200-30940400	Weak transcription	HUVEC	blood vessel
27	chr15:30922400-30938000	Weak transcription	HepG2	liver
28	chr15:30922400-30952400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
29	chr15:30924600-30961800	Weak transcription	Fetal Stomach	stomach
30	chr15:30928000-30945800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr15:30928600-30938200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr15:30929400-30942200	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr15:30930200-30938000	Weak transcription	Osteobl	bone
34	chr15:30931800-30952400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr15:30932200-30942200	Weak transcription	NHLF	lung
36	chr15:30933000-30941200	Strong transcription	Monocytes-CD14+_RO01746	blood
37	chr15:30933000-30943200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr15:30933000-30944600	Strong transcription	Dnd41	blood
39	chr15:30933400-30943800	Strong transcription	HUES64 Cell Line	embryonic stem cell
40	chr15:30933600-30943800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
41	chr15:30934000-30939400	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr15:30934000-30951400	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr15:30935000-30941600	Strong transcription	A549	lung
44	chr15:30935000-30943200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr15:30935400-30941000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr15:30935600-30938000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr15:30935600-30941400	Weak transcription	K562	blood
48	chr15:30935800-30938200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr15:30936000-30938000	Weak transcription	GM12878-XiMat	blood
50	chr15:30936000-30942600	Strong transcription	HMEC	breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links