Variant report

Variant nsv827916
Chromosome Location chr17:20379830-20442445
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:251 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:20369800-20380000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr17:20370800-20394800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr17:20379000-20396200 Weak transcription NHEK skin
4 chr17:20379800-20380600 Enhancers Esophagus oesophagus
5 chr17:20380000-20380600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr17:20380200-20380600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr17:20380600-20383600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr17:20381000-20381400 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr17:20383000-20383800 Enhancers Stomach Mucosa stomach
10 chr17:20383600-20384000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr17:20383600-20384400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr17:20384400-20384600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr17:20384600-20391800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr17:20388200-20388400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr17:20388200-20388600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr17:20388200-20388600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
17 chr17:20388200-20388600 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr17:20388200-20388600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr17:20388200-20388600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr17:20388200-20388600 Enhancers Muscle Satellite Cultured Cells --
21 chr17:20388200-20388600 Active TSS Hela-S3 cervix
22 chr17:20388200-20388600 Active TSS Osteobl bone
23 chr17:20388400-20388600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr17:20391800-20392400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr17:20392400-20394800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr17:20394800-20396200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr17:20394800-20397600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr17:20396200-20396400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr17:20396200-20396600 Flanking Active TSS NHEK skin
30 chr17:20396400-20397800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr17:20396600-20396800 Active TSS NHEK skin
32 chr17:20397600-20398200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr17:20397800-20398400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr17:20398200-20399200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr17:20420400-20421000 Active TSS Fetal Thymus thymus
36 chr17:20421000-20424800 Weak transcription Fetal Thymus thymus
37 chr17:20424800-20425200 Enhancers Fetal Thymus thymus
38 chr17:20432800-20433400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr17:20432800-20433800 Enhancers HUES6 Cell Line embryonic stem cell
40 chr17:20433200-20434400 Enhancers HUES64 Cell Line embryonic stem cell
41 chr17:20433400-20433600 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr17:20433400-20434400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr17:20433600-20433800 Enhancers H1 Cell Line embryonic stem cell
44 chr17:20433600-20433800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr17:20433600-20434000 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr17:20433600-20434200 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr17:20433600-20434400 Enhancers Dnd41 blood
48 chr17:20433800-20434000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
49 chr17:20433800-20434200 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr17:20433800-20434400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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