Variant report

Variant	nsv828544
Chromosome Location	chr19:36207191-36210758
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1086)
CpG islands
(count:427)
Chromatin interactive
region (count:60)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1086 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:36207610-36208123	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:36207654-36208145	K562	blood:	n/a	n/a
3	ATF1	chr19:36207692-36208032	K562	blood:	n/a	n/a
4	ATF1	chr19:36208328-36208830	K562	blood:	n/a	n/a
5	ATF2	chr19:36207579-36208166	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr19:36207551-36208817	GM12878	blood:	n/a	n/a
7	ATF2	chr19:36207608-36208219	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr19:36208042-36208736	GM12878	blood:	n/a	n/a
9	ATF3	chr19:36208539-36208826	GM12878	blood:	n/a	n/a
10	ATF3	chr19:36208302-36208846	HepG2	liver:	n/a	n/a
11	ATF3	chr19:36208319-36208866	GM12878	blood:	n/a	n/a
12	ATF3	chr19:36207188-36208502	A549	lung:	n/a	chr19:36208188-36208197
13	ATF3	chr19:36207390-36208678	A549	lung:	n/a	chr19:36208188-36208197
14	ATF3	chr19:36208313-36208851	K562	blood:	n/a	n/a
15	ATF3	chr19:36209352-36210080	A549	lung:	n/a	n/a
16	BACH1	chr19:36207082-36207429	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr19:36207786-36208009	K562	blood:	n/a	n/a
18	BACH1	chr19:36209424-36209538	K562	blood:	n/a	n/a
19	BACH1	chr19:36208327-36208583	K562	blood:	n/a	n/a
20	BACH1	chr19:36207667-36208836	H1-hESC	embryonic stem cell:	n/a	n/a
21	BCL3	chr19:36207629-36209678	GM12878	blood:	n/a	chr19:36208728-36208741 chr19:36208795-36208804 chr19:36209317-36209326 chr19:36208079-36208092
22	BCL3	chr19:36206828-36208683	A549	lung:	n/a	chr19:36208079-36208092
23	BCL3	chr19:36209216-36209990	A549	lung:	n/a	chr19:36209317-36209326
24	BCL3	chr19:36207276-36208680	A549	lung:	n/a	chr19:36208079-36208092
25	BCLAF1	chr19:36207494-36208843	GM12878	blood:	n/a	chr19:36208728-36208741 chr19:36208795-36208804 chr19:36208079-36208092
26	BCLAF1	chr19:36207411-36208822	GM12878	blood:	n/a	chr19:36208728-36208741 chr19:36208795-36208804 chr19:36208079-36208092
27	BHLHE40	chr19:36207459-36208800	K562	blood:	n/a	chr19:36208726-36208742
28	BHLHE40	chr19:36207509-36208692	HepG2	liver:	n/a	n/a
29	BHLHE40	chr19:36207532-36208898	GM12878	blood:	n/a	chr19:36208726-36208742
30	BRCA1	chr19:36207669-36208585	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr19:36207440-36208470	H1-hESC	embryonic stem cell:	n/a	n/a
32	BRCA1	chr19:36208386-36208624	GM12878	blood:	n/a	n/a
33	BRCA1	chr19:36207617-36207959	HepG2	liver:	n/a	n/a
34	CBX3	chr19:36207337-36208629	K562	blood:	n/a	n/a
35	CCNT2	chr19:36207384-36209615	K562	blood:	n/a	n/a
36	CEBPB	chr19:36210408-36210614	HepG2	liver:	n/a	n/a
37	CEBPB	chr19:36207659-36208658	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr19:36207560-36208239	H1-hESC	embryonic stem cell:	n/a	n/a
39	CHD1	chr19:36207443-36208081	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD1	chr19:36207456-36208615	GM12878	blood:	n/a	n/a
41	CHD1	chr19:36208943-36210140	IMR90	lung:	n/a	chr19:36209948-36209958
42	CHD2	chr19:36207678-36208995	Hela-S3	cervix:	n/a	n/a
43	CHD2	chr19:36207810-36208823	HepG2	liver:	n/a	n/a
44	CHD2	chr19:36208339-36208786	K562	blood:	n/a	n/a
45	CHD2	chr19:36210467-36210555	HepG2	liver:	n/a	n/a
46	CHD2	chr19:36207551-36208958	GM12878	blood:	n/a	n/a
47	CHD2	chr19:36209530-36209704	HepG2	liver:	n/a	n/a
48	CHD2	chr19:36207337-36208840	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr19:36207470-36207594	HepG2	liver:	n/a	n/a
50	CHD2	chr19:36207901-36208107	K562	blood:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:36208495-36208545	HEK293	kidney:	embryo
2	chr19:36208495-36208545	MCF-7	breast:	n/a
3	chr19:36208495-36208545	GM12878	blood:	n/a
4	chr19:36207534-36207584	NHBE	bronchial:	n/a
5	chr19:36208495-36208545	CMK	blood:	n/a
6	chr19:36210692-36210742	T-47D	breast:	n/a
7	chr19:36207534-36207584	ECC-1	luminal epithelium:	n/a
8	chr19:36210688-36210738	HL-60	blood:	n/a
9	chr19:36207534-36207584	Hepatocyte	liver:	n/a
10	chr19:36210688-36210738	PANC-1	pancreas:	n/a
11	chr19:36208498-36208548	U87	brain:	n/a
12	chr19:36210692-36210742	AG09319	gingival:	n/a
13	chr19:36207871-36207921	GM12892	blood:	n/a
14	chr19:36208495-36208545	HCM	heart:	n/a
15	chr19:36207871-36207921	HCF	heart:	n/a
16	chr19:36207534-36207584	HNPCEpiC	eye:	n/a
17	chr19:36210692-36210742	Caco-2	colon:	n/a
18	chr19:36210692-36210742	HRPEpiC	eye:	n/a
19	chr19:36207534-36207584	SAEC	small airway:	n/a
20	chr19:36207871-36207921	Caco-2	colon:	n/a
21	chr19:36208495-36208545	SK-N-MC	brain:	n/a
22	chr19:36208498-36208548	NHBE	bronchial:	n/a
23	chr19:36207871-36207921	HUVEC	blood vessel:	n/a
24	chr19:36209626-36209676	NHBE	bronchial:	n/a
25	chr19:36208495-36208545	ovcar-3	ovarian:	n/a
26	chr19:36207871-36207921	HCPEpiC	choroid plexus:	n/a
27	chr19:36208495-36208545	GM06990	blood:	n/a
28	chr19:36210692-36210742	HAEpiC	amniotic membrane:	n/a
29	chr19:36209626-36209676	NH-A	brain:	n/a
30	chr19:36210688-36210738	MCF-7	breast:	n/a
31	chr19:36209626-36209676	A549	lung:	n/a
32	chr19:36210692-36210742	PANC-1	pancreas:	n/a
33	chr19:36209626-36209676	K562	blood:	n/a
34	chr19:36209626-36209676	GM12891	blood:	n/a
35	chr19:36207534-36207584	GM12878	blood:	n/a
36	chr19:36208495-36208545	HRCEpiC	kidney:	n/a
37	chr19:36207534-36207584	AG09319	gingival:	n/a
38	chr19:36210692-36210742	HEK293	kidney:	embryo
39	chr19:36209626-36209676	Hela-S3	cervix:	n/a
40	chr19:36209626-36209676	AG09319	gingival:	n/a
41	chr19:36207534-36207584	AG04450	lung:	fetal
42	chr19:36210692-36210742	HEEpiC	esophagus:	n/a
43	chr19:36210692-36210742	AG04450	lung:	fetal
44	chr19:36210688-36210738	Caco-2	colon:	n/a
45	chr19:36208495-36208545	NB4	blood:	n/a
46	chr19:36208498-36208548	ProgFib	skin:	n/a
47	chr19:36210688-36210738	HPAEpiC	pulmonary alveolar:	n/a
48	chr19:36210688-36210738	ProgFib	skin:	n/a
49	chr19:36209626-36209676	Hepatocyte	liver:	n/a
50	chr19:36209626-36209676	GM19239	blood:	n/a

(count:60 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:36207151..36210695-chr19:36264649..36268718,5	K562	blood:
2	chr19:36208456..36210034-chr19:36345854..36347720,2	K562	blood:
3	chr19:36208544..36210188-chr19:36360524..36362280,2	MCF-7	breast:
4	chr19:36047300..36050125-chr19:36207207..36209834,3	K562	blood:
5	chr19:36207415..36208017-chr19:42579953..42580598,2	Hela-S3	cervix:
6	chr19:35757743..35760122-chr19:36207492..36209553,2	MCF-7	breast:
7	chr17:8076032..8077005-chr19:36207457..36208055,2	Hela-S3	cervix:
8	chr19:36027447..36030155-chr19:36207019..36209668,2	K562	blood:
9	chr19:36040674..36043456-chr19:36205595..36207863,3	MCF-7	breast:
10	chr19:35758844..35760411-chr19:36208018..36210634,2	MCF-7	breast:
11	chr19:36205479..36207948-chr19:36393989..36396293,2	K562	blood:
12	chr19:36206622..36208995-chr6:27860723..27862683,2	K562	blood:
13	chr19:36136475..36140054-chr19:36207952..36210367,3	MCF-7	breast:
14	chr19:36208378..36210285-chr19:36358548..36361708,3	K562	blood:
15	chr19:36207964..36208549-chr19:36422265..36423107,3	MCF-7	breast:
16	chr19:36204664..36206261-chr19:36206379..36207962,2	K562	blood:
17	chr19:36184398..36185696-chr19:36206796..36208519,15	MCF-7	breast:
18	chr19:36207379..36214815-chr19:36234227..36241330,25	MCF-7	breast:
19	chr19:36184326..36185624-chr19:36206337..36208829,45	MCF-7	breast:
20	chr19:36039764..36040843-chr19:36207367..36208510,6	K562	blood:
21	chr19:36208682..36209521-chr20:37100779..37101545,2	HCT-116	colon:
22	chr19:36208921..36210608-chr19:36499552..36501350,2	MCF-7	breast:
23	chr19:36035974..36038022-chr19:36207371..36209822,3	MCF-7	breast:
24	chr19:36047138..36050303-chr19:36204932..36209680,5	K562	blood:
25	chr19:36018973..36020669-chr19:36208062..36210070,2	K562	blood:
26	chr19:35760310..35760965-chr19:36207881..36208591,2	MCF-7	breast:
27	chr19:36207421..36208896-chr19:36422255..36423160,8	K562	blood:
28	chr19:36119042..36121098-chr19:36206964..36208639,2	K562	blood:
29	chr19:36035457..36038261-chr19:36205897..36210098,5	MCF-7	breast:
30	chr19:36207753..36208395-chr19:36310728..36311348,2	MCF-7	breast:
31	chr19:36133592..36136218-chr19:36207471..36210079,2	MCF-7	breast:
32	chr19:36208185..36209878-chr19:36358146..36361161,3	K562	blood:
33	chr19:36208210..36211144-chr19:36264877..36267691,4	MCF-7	breast:
34	chr19:36207922..36208687-chr19:36310659..36311315,2	MCF-7	breast:
35	chr15:91414558..91415107-chr19:36208292..36208792,2	NB4	blood:
36	chr19:36184365..36185469-chr19:36207271..36208713,26	K562	blood:
37	chr19:36207093..36207844-chr19:36310862..36311467,2	MCF-7	breast:
38	chr19:36034283..36038136-chr19:36206970..36210335,6	K562	blood:
39	chr19:36048652..36049165-chr19:36207784..36208399,2	K562	blood:
40	chr19:36046260..36047193-chr19:36207555..36208556,3	K562	blood:
41	chr19:36205476..36213390-chr19:36226310..36233646,27	MCF-7	breast:
42	chr19:36203511..36205032-chr19:36208383..36210782,2	MCF-7	breast:
43	chr19:36183185..36183699-chr19:36207580..36208266,2	MCF-7	breast:
44	chr19:36207787..36211113-chr19:36265053..36268029,3	K562	blood:
45	chr19:36039818..36040647-chr19:36207140..36208037,3	MCF-7	breast:
46	chr19:36000992..36001563-chr19:36207919..36208494,2	K562	blood:
47	chr19:36039298..36042202-chr19:36205627..36208173,3	K562	blood:
48	chr19:35752101..35756218-chr19:36205472..36209304,3	MCF-7	breast:
49	chr19:36034638..36039287-chr19:36205354..36210335,7	K562	blood:
50	chr19:36193434..36194967-chr19:36206737..36208478,2	K562	blood:

No data

Variant related genes	Relation type
KMT2B	TF binding region
ENSG00000272333	TF binding region
KMT2B	CpG island
ENSG00000272333	CpG island
ENSG00000161249	chromatin interactions
ENSG00000205155	chromatin interactions
ENSG00000105677	chromatin interactions
ENSG00000170471	chromatin interactions
ENSG00000200463	chromatin interactions
ENSG00000161265	chromatin interactions
ENSG00000181392	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000197153	chromatin interactions
ENSG00000105663	chromatin interactions
ENSG00000161270	chromatin interactions
ENSG00000105732	chromatin interactions
ENSG00000188223	chromatin interactions
ENSG00000267439	chromatin interactions
ENSG00000267796	chromatin interactions
ENSG00000105679	chromatin interactions
ENSG00000189001	chromatin interactions
ENSG00000167595	chromatin interactions
ENSG00000233224	chromatin interactions
ENSG00000126254	chromatin interactions
ENSG00000105290	chromatin interactions
ENSG00000267120	chromatin interactions
ENSG00000004776	chromatin interactions
ENSG00000236144	chromatin interactions
ENSG00000167604	chromatin interactions
ENSG00000272333	chromatin interactions
ENSG00000126267	chromatin interactions
ENSG00000105672	chromatin interactions
ENSG00000268947	chromatin interactions
ENSG00000105699	chromatin interactions
ENSG00000004777	chromatin interactions
ENSG00000126246	chromatin interactions
ENSG00000011590	chromatin interactions
ENSG00000126259	chromatin interactions
ENSG00000105698	chromatin interactions
ENSG00000105675	chromatin interactions

Extended variants
information (count: 132 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:132 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs563278405	chr19:36207208-36207209	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
2	rs376730289	chr19:36207213-36207214	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
3	rs199720480	chr19:36207231-36207232	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
4	rs201608304	chr19:36207248-36207249	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
5	rs187428056	chr19:36207251-36207252	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
6	rs538151412	chr19:36207257-36207258	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
7	rs2234375	chr19:36207336-36207337	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs568164296	chr19:36207368-36207369	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
9	rs201322774	chr19:36207437-36207438	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
10	rs373668974	chr19:36207456-36207457	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
11	rs537226113	chr19:36207475-36207476	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
12	rs202219173	chr19:36207494-36207495	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
13	rs267605434	chr19:36207502-36207503	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
14	rs267605435	chr19:36207503-36207504	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
15	rs1052491	chr19:36207510-36207511	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
16	rs376705072	chr19:36207560-36207561	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
17	rs149724536	chr19:36207597-36207598	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
18	rs369377421	chr19:36207637-36207638	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
19	rs148713946	chr19:36207649-36207650	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
20	rs142256633	chr19:36207652-36207653	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
21	rs372821981	chr19:36207661-36207662	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
22	rs375860843	chr19:36207664-36207665	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
23	rs375000684	chr19:36207670-36207671	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
24	rs370162808	chr19:36207672-36207673	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
25	rs572480883	chr19:36207683-36207684	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
26	rs571028411	chr19:36207691-36207692	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
27	rs2234376	chr19:36207704-36207705	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
28	rs564427326	chr19:36207710-36207711	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
29	rs368669812	chr19:36207737-36207738	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
30	rs145598634	chr19:36207780-36207781	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	28 gene(s)	Overlapped CNVs	n/a
31	rs73048513	chr19:36207893-36207894	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	28 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs180944859	chr19:36207919-36207920	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
33	rs34125691	chr19:36207923-36207924	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
34	rs111444534	chr19:36207955-36207956	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	30 gene(s)	Overlapped CNVs	n/a
35	rs529375520	chr19:36208000-36208001	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	30 gene(s)	Overlapped CNVs	n/a
36	rs563259037	chr19:36208009-36208010	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	30 gene(s)	Overlapped CNVs	n/a
37	rs373894796	chr19:36208014-36208015	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	30 gene(s)	Overlapped CNVs	n/a
38	rs34827551	chr19:36208042-36208043	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
39	rs397801308	chr19:36208044-36208045	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
40	rs559509308	chr19:36208047-36208048	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
41	rs539426059	chr19:36208052-36208053	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
42	rs551732898	chr19:36208064-36208065	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
43	rs571555006	chr19:36208079-36208080	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
44	rs537297026	chr19:36208107-36208108	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
45	rs557753238	chr19:36208139-36208140	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
46	rs567421816	chr19:36208140-36208141	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
47	rs559213290	chr19:36208157-36208158	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	29 gene(s)	Overlapped CNVs	n/a
48	rs576294742	chr19:36208189-36208190	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	31 gene(s)	Overlapped CNVs	n/a
49	rs116911069	chr19:36208223-36208224	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	31 gene(s)	Overlapped CNVs	n/a
50	rs572543020	chr19:36208252-36208253	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	31 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	21397856	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Ovarian cancer	20844748	CNVD
Non-small cell lung cancer	21829676	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Honadal dysgenesis	21048976	CNVD
Neurodevelopmental disorder	22521361	CNVD
Endometrial cancer	23636398	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Gastric cancer	21811585	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	21569311	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36201600-36207200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
2	chr19:36203200-36207400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
3	chr19:36203600-36207600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
4	chr19:36204600-36208400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
5	chr19:36205200-36208200	Flanking Active TSS	GM12878-XiMat	blood
6	chr19:36205600-36207400	Enhancers	Stomach Mucosa	stomach
7	chr19:36206200-36207200	Flanking Active TSS	HepG2	liver
8	chr19:36206200-36207600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
9	chr19:36206200-36207800	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr19:36206200-36207800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr19:36206200-36207800	Flanking Active TSS	Brain Germinal Matrix	brain
12	chr19:36206400-36207200	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr19:36206400-36207200	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
14	chr19:36206400-36207200	Enhancers	Fetal Heart	heart
15	chr19:36206400-36207200	Enhancers	Ovary	ovary
16	chr19:36206400-36207200	Enhancers	Spleen	Spleen
17	chr19:36206400-36207400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr19:36206400-36207600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr19:36206400-36207600	Enhancers	Fetal Brain Male	brain
20	chr19:36206400-36207800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr19:36206400-36207800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr19:36206400-36207800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr19:36206400-36207800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
24	chr19:36206400-36208200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr19:36206600-36207200	Flanking Active TSS	H1 Cell Line	embryonic stem cell
26	chr19:36206600-36207200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr19:36206600-36207200	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr19:36206600-36207200	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr19:36206600-36207200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr19:36206600-36207200	Bivalent Enhancer	Fetal Thymus	thymus
31	chr19:36206600-36207200	Enhancers	Small Intestine	intestine
32	chr19:36206600-36207400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
33	chr19:36206600-36207400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
34	chr19:36206600-36207400	Flanking Active TSS	Brain Angular Gyrus	brain
35	chr19:36206600-36207400	Flanking Active TSS	Brain Anterior Caudate	brain
36	chr19:36206600-36207400	Flanking Active TSS	Rectal Smooth Muscle	rectum
37	chr19:36206600-36207600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr19:36206600-36207600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr19:36206600-36207600	Flanking Active TSS	Brain Hippocampus Middle	brain
40	chr19:36206600-36207600	Flanking Active TSS	Duodenum Mucosa	Duodenum
41	chr19:36206600-36207600	Flanking Active TSS	Fetal Brain Female	brain
42	chr19:36206600-36207600	Flanking Active TSS	A549	lung
43	chr19:36206600-36207800	Flanking Active TSS	Primary B cells from peripheral blood	blood
44	chr19:36206600-36207800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr19:36206600-36208000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
46	chr19:36206600-36208000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
47	chr19:36206600-36208200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr19:36206600-36208200	Flanking Active TSS	HMEC	breast
49	chr19:36206600-36208400	Flanking Active TSS	Primary hematopoietic stem cells	blood
50	chr19:36206600-36208400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood

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